RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 NCMAPQ5T1S8 102 aa12.7□□□□□ -0.38
TRAF1-201ENST00000373887 PCOLCE2Q9UKZ9 415 aa12.7□□□□□ -0.38
TRAF1-201ENST00000373887 ABCA3Q99758 1704 aa12.7□□□□□ -0.38
TRAF1-201ENST00000373887 CST4P01036 141 aa12.7□□□□□ -0.38
TRAF1-201ENST00000373887 RAB32Q13637 225 aa12.7□□□□□ -0.38
TRAF1-201ENST00000373887 ZNF774Q6NX45 483 aa12.7□□□□□ -0.38
TRAF1-201ENST00000373887 SLC26A10Q8NG04 563 aa12.7□□□□□ -0.38
TRAF1-201ENST00000373887 AUP1Q9Y679 476 aa12.7□□□□□ -0.38
TRAF1-201ENST00000373887 ANKRD31Q8N7Z5 1873 aa12.7□□□□□ -0.38
TRAF1-201ENST00000373887 CLDN34H7C241 214 aa12.7□□□□□ -0.38
TRAF1-201ENST00000373887 SRSF9Q13242 221 aaKnown RBP eCLIP12.7□□□□□ -0.38
TRAF1-201ENST00000373887 MRGPRDQ8TDS7 321 aa12.7□□□□□ -0.38
TRAF1-201ENST00000373887 SEBOXQ9HB31 216 aaPredicted RBP12.7□□□□□ -0.38
TRAF1-201ENST00000373887 PRR13Q9NZ81 148 aa12.7□□□□□ -0.38
TRAF1-201ENST00000373887 SCN1AP35498 2009 aa12.69□□□□□ -0.38
TRAF1-201ENST00000373887 UQCC3Q6UW78 93 aa12.69□□□□□ -0.38
TRAF1-201ENST00000373887 ZNF841Q6ZN19 808 aa12.69□□□□□ -0.38
TRAF1-201ENST00000373887 TRAV1-2A0A0B4J238 106 aa12.69□□□□□ -0.38
TRAF1-201ENST00000373887 GZMKP49863 264 aa12.69□□□□□ -0.38
TRAF1-201ENST00000373887 PPP1R1AQ13522 171 aa12.69□□□□□ -0.38
TRAF1-201ENST00000373887 ST3GAL2Q16842 350 aa12.69□□□□□ -0.38
TRAF1-201ENST00000373887 FOXB2Q5VYV0 432 aa12.69□□□□□ -0.38
TRAF1-201ENST00000373887 ETV3LQ6ZN32 361 aa12.69□□□□□ -0.38
TRAF1-201ENST00000373887 PRSS42Q7Z5A4 293 aa12.69□□□□□ -0.38
TRAF1-201ENST00000373887 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.69□□□□□ -0.38
TRAF1-201ENST00000373887 RPS4XP62701 263 aaKnown RBP12.69□□□□□ -0.38
TRAF1-201ENST00000373887 CDC20Q12834 499 aa12.69□□□□□ -0.38
TRAF1-201ENST00000373887 HFEQ30201 348 aa12.69□□□□□ -0.38
TRAF1-201ENST00000373887 SCMH1Q96GD3 660 aa12.69□□□□□ -0.38
TRAF1-201ENST00000373887 ELOVL1Q9BW60 279 aa12.69□□□□□ -0.38
TRAF1-201ENST00000373887 BCL2L10Q9HD36 194 aa12.69□□□□□ -0.38
TRAF1-201ENST00000373887 AKIP1Q9NQ31 210 aa12.69□□□□□ -0.38
TRAF1-201ENST00000373887 RASL12Q9NYN1 266 aa12.69□□□□□ -0.38
TRAF1-201ENST00000373887 PCDHGA9Q9Y5G4 932 aaKnown RBP12.69□□□□□ -0.38
TRAF1-201ENST00000373887 RER1O15258 196 aa12.69□□□□□ -0.38
TRAF1-201ENST00000373887 NTN1O95631 604 aa12.69□□□□□ -0.38
TRAF1-201ENST00000373887 APELAP0DMC3 54 aa12.69□□□□□ -0.38
TRAF1-201ENST00000373887 HERVK_113P61574 105 aa12.69□□□□□ -0.38
TRAF1-201ENST00000373887 GNG3P63215 75 aa12.69□□□□□ -0.38
TRAF1-201ENST00000373887 OR8D4Q8NGM9 314 aa12.69□□□□□ -0.38
TRAF1-201ENST00000373887 OR1L6Q8NGR2 347 aa12.69□□□□□ -0.38
TRAF1-201ENST00000373887 SLC7A10Q9NS82 523 aa12.69□□□□□ -0.38
TRAF1-201ENST00000373887 SHANK3Q9BYB0 1731 aa12.69□□□□□ -0.38
TRAF1-201ENST00000373887 TRIP12Q14669 1992 aaPredicted RBP12.69□□□□□ -0.38
TRAF1-201ENST00000373887 TUBAL3A6NHL2 446 aa12.69□□□□□ -0.38
TRAF1-201ENST00000373887 SLC17A2O00624 439 aa12.69□□□□□ -0.38
TRAF1-201ENST00000373887 SUMO3P55854 103 aaPredicted RBP12.69□□□□□ -0.38
TRAF1-201ENST00000373887 RNPS1Q15287 305 aaKnown RBP12.69□□□□□ -0.38
TRAF1-201ENST00000373887 OR8A1Q8NGG7 326 aa12.69□□□□□ -0.38
TRAF1-201ENST00000373887 COX14Q96I36 57 aa12.69□□□□□ -0.38
TRAF1-201ENST00000373887 FGF20Q9NP95 211 aaPredicted RBP12.69□□□□□ -0.38
TRAF1-201ENST00000373887 PLXNB2O15031 1838 aa12.68□□□□□ -0.38
TRAF1-201ENST00000373887 CDX4O14627 284 aaPredicted RBP12.68□□□□□ -0.38
TRAF1-201ENST00000373887 OR5AC1P0C628 307 aa12.68□□□□□ -0.38
TRAF1-201ENST00000373887 WDR74Q6RFH5 385 aaPredicted RBP12.68□□□□□ -0.38
TRAF1-201ENST00000373887 WFDC3Q8IUB2 231 aa12.68□□□□□ -0.38
TRAF1-201ENST00000373887 RIMKLAQ8IXN7 391 aa12.68□□□□□ -0.38
TRAF1-201ENST00000373887 MUC15Q8N387 334 aa12.68□□□□□ -0.38
TRAF1-201ENST00000373887 OTOSQ8NHW6 89 aa12.68□□□□□ -0.38
TRAF1-201ENST00000373887 LRRC29Q8WV35 223 aa12.68□□□□□ -0.38
TRAF1-201ENST00000373887 SLC26A1Q9H2B4 701 aa12.68□□□□□ -0.38
TRAF1-201ENST00000373887 KNL1Q8NG31 2342 aa12.68□□□□□ -0.38
TRAF1-201ENST00000373887 GFRA3O60609 400 aa12.68□□□□□ -0.38
TRAF1-201ENST00000373887 ORM1P02763 201 aa12.68□□□□□ -0.38
TRAF1-201ENST00000373887 SLC6A1P30531 599 aa12.68□□□□□ -0.38
TRAF1-201ENST00000373887 DYNLT3P51808 116 aa12.68□□□□□ -0.38
TRAF1-201ENST00000373887 KISS1Q15726 138 aa12.68□□□□□ -0.38
TRAF1-201ENST00000373887 NHLRC1Q6VVB1 395 aa12.68□□□□□ -0.38
TRAF1-201ENST00000373887 MAP1LC3CQ9BXW4 147 aa12.68□□□□□ -0.38
TRAF1-201ENST00000373887 GEMIN2O14893 280 aaKnown RBP12.68□□□□□ -0.38
TRAF1-201ENST00000373887 MELTFP08582 738 aa12.68□□□□□ -0.38
TRAF1-201ENST00000373887 UBE2L3P68036 154 aaKnown RBP12.68□□□□□ -0.38
TRAF1-201ENST00000373887 IGFBP7Q16270 282 aa12.68□□□□□ -0.38
TRAF1-201ENST00000373887 VN1R4Q7Z5H5 301 aa12.68□□□□□ -0.38
TRAF1-201ENST00000373887 PDPNQ86YL7 162 aa12.68□□□□□ -0.38
TRAF1-201ENST00000373887 ZG16BQ96DA0 208 aa12.68□□□□□ -0.38
TRAF1-201ENST00000373887 DUSP15Q9H1R2 295 aaPredicted RBP12.68□□□□□ -0.38
TRAF1-201ENST00000373887 BRWD3Q6RI45 1802 aa12.68□□□□□ -0.38
TRAF1-201ENST00000373887 COL11A2P13942 1736 aaPredicted RBP12.68□□□□□ -0.38
TRAF1-201ENST00000373887 OR5B21A6NL26 309 aa12.68□□□□□ -0.38
TRAF1-201ENST00000373887 SEMA7AO75326 666 aa12.68□□□□□ -0.38
TRAF1-201ENST00000373887 SFT2D2O95562 160 aa12.68□□□□□ -0.38
TRAF1-201ENST00000373887 RNASE1P07998 156 aaKnown RBP12.68□□□□□ -0.38
TRAF1-201ENST00000373887 OR3A1P47881 315 aa12.68□□□□□ -0.38
TRAF1-201ENST00000373887 SSBP1Q04837 148 aaKnown RBP12.68□□□□□ -0.38
TRAF1-201ENST00000373887 WDR38Q5JTN6 314 aa12.68□□□□□ -0.38
TRAF1-201ENST00000373887 TMEM211Q6ICI0 200 aa12.68□□□□□ -0.38
TRAF1-201ENST00000373887 SEC11CQ9BY50 192 aa12.68□□□□□ -0.38
TRAF1-201ENST00000373887 TAS2R60P59551 318 aa12.68□□□□□ -0.38
TRAF1-201ENST00000373887 SSX1Q16384 188 aa12.68□□□□□ -0.38
TRAF1-201ENST00000373887 SLC35B3Q9H1N7 401 aa12.68□□□□□ -0.38
TRAF1-201ENST00000373887 DUSP21Q9H596 190 aa12.68□□□□□ -0.38
TRAF1-201ENST00000373887 A0A1W2PN81 502 aa12.67□□□□□ -0.38
TRAF1-201ENST00000373887 C9orf170A2RU37 121 aa12.67□□□□□ -0.38
TRAF1-201ENST00000373887 MOSPD3O75425 235 aa12.67□□□□□ -0.38
TRAF1-201ENST00000373887 HLXQ14774 488 aaPredicted RBP12.67□□□□□ -0.38
TRAF1-201ENST00000373887 MUC20Q8N307 709 aaPredicted RBP12.67□□□□□ -0.38
TRAF1-201ENST00000373887 ATP5SQ99766 215 aa12.67□□□□□ -0.38
TRAF1-201ENST00000373887 CD160O95971 181 aa12.67□□□□□ -0.38
TRAF1-201ENST00000373887 OR4A8P0C604 315 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms