RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 OR2C3Q8N628 320 aa12.86□□□□□ -0.35
COL9A2-202ENST00000372748 TMEM171Q8WVE6 324 aa12.86□□□□□ -0.35
COL9A2-202ENST00000372748 MEGF10Q96KG7 1140 aa12.86□□□□□ -0.35
COL9A2-202ENST00000372748 TP53RKQ96S44 253 aa12.86□□□□□ -0.35
COL9A2-202ENST00000372748 PRO1933Q9H354 126 aa12.86□□□□□ -0.35
COL9A2-202ENST00000372748 NKX2-6A6NCS4 301 aa12.85□□□□□ -0.35
COL9A2-202ENST00000372748 CST7O76096 145 aa12.85□□□□□ -0.35
COL9A2-202ENST00000372748 JMJD7P0C870 316 aa12.85□□□□□ -0.35
COL9A2-202ENST00000372748 GAMTQ14353 236 aa12.85□□□□□ -0.35
COL9A2-202ENST00000372748 PIGYQ3MUY2 71 aa12.85□□□□□ -0.35
COL9A2-202ENST00000372748 PRAMEF20Q5VT98 475 aa12.85□□□□□ -0.35
COL9A2-202ENST00000372748 LGI3Q8N145 548 aa12.85□□□□□ -0.35
COL9A2-202ENST00000372748 FBXL14Q8N1E6 418 aa12.85□□□□□ -0.35
COL9A2-202ENST00000372748 OR6X1Q8NH79 312 aa12.85□□□□□ -0.35
COL9A2-202ENST00000372748 OPA3Q9H6K4 179 aa12.85□□□□□ -0.35
COL9A2-202ENST00000372748 GFOD1Q9NXC2 390 aa12.85□□□□□ -0.35
COL9A2-202ENST00000372748 SLC7A11Q9UPY5 501 aa12.85□□□□□ -0.35
COL9A2-202ENST00000372748 EML6Q6ZMW3 1958 aa12.85□□□□□ -0.35
COL9A2-202ENST00000372748 SDK2Q58EX2 2172 aa12.85□□□□□ -0.35
COL9A2-202ENST00000372748 SCRG1O75711 98 aa12.85□□□□□ -0.35
COL9A2-202ENST00000372748 SRP19P09132 144 aaKnown RBP12.85□□□□□ -0.35
COL9A2-202ENST00000372748 PNLIPP16233 465 aa12.85□□□□□ -0.35
COL9A2-202ENST00000372748 ZNF133P52736 654 aaPredicted RBP12.85□□□□□ -0.35
COL9A2-202ENST00000372748 RSPO1Q2MKA7 263 aaPredicted RBP12.85□□□□□ -0.35
COL9A2-202ENST00000372748 SNAI3Q3KNW1 292 aa12.85□□□□□ -0.35
COL9A2-202ENST00000372748 KHDC3LQ587J8 217 aa12.85□□□□□ -0.35
COL9A2-202ENST00000372748 PHYHD1Q5SRE7 291 aa12.85□□□□□ -0.35
COL9A2-202ENST00000372748 SUCNR1Q9BXA5 334 aa12.85□□□□□ -0.35
COL9A2-202ENST00000372748 HSF4Q9ULV5 492 aa12.85□□□□□ -0.35
COL9A2-202ENST00000372748 GEMIN2O14893 280 aaKnown RBP12.84□□□□□ -0.35
COL9A2-202ENST00000372748 PPP1R2P9O14990 202 aa12.84□□□□□ -0.35
COL9A2-202ENST00000372748 FABP4P15090 132 aa12.84□□□□□ -0.35
COL9A2-202ENST00000372748 PPA1Q15181 289 aa12.84□□□□□ -0.35
COL9A2-202ENST00000372748 WDR74Q6RFH5 385 aaPredicted RBP12.84□□□□□ -0.35
COL9A2-202ENST00000372748 CARFQ8N187 725 aa12.84□□□□□ -0.35
COL9A2-202ENST00000372748 CCDC54Q8NEL0 328 aa12.84□□□□□ -0.35
COL9A2-202ENST00000372748 PP6455Q8WZ26 134 aa12.84□□□□□ -0.35
COL9A2-202ENST00000372748 TGIF2Q9GZN2 237 aa12.84□□□□□ -0.35
COL9A2-202ENST00000372748 SEMA5BQ9P283 1151 aa12.84□□□□□ -0.35
COL9A2-202ENST00000372748 SSSCA1O60232 199 aa12.84□□□□□ -0.35
COL9A2-202ENST00000372748 GDF9O60383 454 aa12.84□□□□□ -0.35
COL9A2-202ENST00000372748 F10P00742 488 aa12.84□□□□□ -0.35
COL9A2-202ENST00000372748 PTGDSP41222 190 aa12.84□□□□□ -0.35
COL9A2-202ENST00000372748 GUCA1AP43080 201 aaPredicted RBP12.84□□□□□ -0.35
COL9A2-202ENST00000372748 RTL6Q6ICC9 239 aa12.84□□□□□ -0.35
COL9A2-202ENST00000372748 C5orf24Q7Z6I8 188 aa12.84□□□□□ -0.35
COL9A2-202ENST00000372748 OR14L1PQ8NHC6 308 aa12.84□□□□□ -0.35
COL9A2-202ENST00000372748 MRGPRX4Q96LA9 322 aa12.84□□□□□ -0.35
COL9A2-202ENST00000372748 PHF7Q9BWX1 381 aaPredicted RBP12.84□□□□□ -0.35
COL9A2-202ENST00000372748 FSCN3Q9NQT6 498 aa12.84□□□□□ -0.35
COL9A2-202ENST00000372748 WSB1Q9Y6I7 421 aa12.84□□□□□ -0.35
COL9A2-202ENST00000372748 V9GYS6 101 aa12.84□□□□□ -0.35
COL9A2-202ENST00000372748 IGKV1-27A0A075B6S5 117 aa12.83□□□□□ -0.35
COL9A2-202ENST00000372748 IGHV3-15A0A0B4J1V0 119 aa12.83□□□□□ -0.35
COL9A2-202ENST00000372748 FOSL1P15407 271 aa12.83□□□□□ -0.35
COL9A2-202ENST00000372748 HIST1H1BP16401 226 aaKnown RBP12.83□□□□□ -0.35
COL9A2-202ENST00000372748 SUMO3P55854 103 aaPredicted RBP12.83□□□□□ -0.35
COL9A2-202ENST00000372748 NKX6-1P78426 367 aaPredicted RBP12.83□□□□□ -0.35
COL9A2-202ENST00000372748 OR2T2Q6IF00 324 aa12.83□□□□□ -0.35
COL9A2-202ENST00000372748 GUSBP11Q6P575 273 aa12.83□□□□□ -0.35
COL9A2-202ENST00000372748 OR5C1Q8NGR4 320 aa12.83□□□□□ -0.35
COL9A2-202ENST00000372748 PRO3102Q9H379 93 aa12.83□□□□□ -0.35
COL9A2-202ENST00000372748 MYOTQ9UBF9 498 aa12.83□□□□□ -0.35
COL9A2-202ENST00000372748 A0A1B0GW64 132 aa12.83□□□□□ -0.36
COL9A2-202ENST00000372748 ZNF587BE7ETH6 402 aa12.83□□□□□ -0.36
COL9A2-202ENST00000372748 M0R135 149 aa12.83□□□□□ -0.36
COL9A2-202ENST00000372748 CA11O75493 328 aa12.83□□□□□ -0.36
COL9A2-202ENST00000372748 IGLV3-1P01715 115 aa12.83□□□□□ -0.36
COL9A2-202ENST00000372748 EPHA1P21709 976 aa12.83□□□□□ -0.36
COL9A2-202ENST00000372748 ICAM4Q14773 271 aa12.83□□□□□ -0.36
COL9A2-202ENST00000372748 KMT5CQ86Y97 462 aa12.83□□□□□ -0.36
COL9A2-202ENST00000372748 C17orf78Q8N4C9 275 aa12.83□□□□□ -0.36
COL9A2-202ENST00000372748 OR4D5Q8NGN0 318 aa12.83□□□□□ -0.36
COL9A2-202ENST00000372748 ZNF799Q96GE5 643 aa12.83□□□□□ -0.36
COL9A2-202ENST00000372748 OXGR1Q96P68 337 aa12.83□□□□□ -0.36
COL9A2-202ENST00000372748 RBM24Q9BX46 236 aaKnown RBP12.83□□□□□ -0.36
COL9A2-202ENST00000372748 METTL9Q9H1A3 318 aa12.83□□□□□ -0.36
COL9A2-202ENST00000372748 PLEK2Q9NYT0 353 aa12.83□□□□□ -0.36
COL9A2-202ENST00000372748 SEC14L6B5MCN3 397 aa12.83□□□□□ -0.36
COL9A2-202ENST00000372748 ZNF266Q14584 549 aa12.83□□□□□ -0.36
COL9A2-202ENST00000372748 CXorf66Q5JRM2 361 aaPredicted RBP12.83□□□□□ -0.36
COL9A2-202ENST00000372748 SSX9Q7RTT3 188 aa12.83□□□□□ -0.36
COL9A2-202ENST00000372748 HIST3H2BBQ8N257 126 aa12.83□□□□□ -0.36
COL9A2-202ENST00000372748 LRTM2Q8N967 370 aa12.83□□□□□ -0.36
COL9A2-202ENST00000372748 OR10AD1Q8NGE0 317 aa12.83□□□□□ -0.36
COL9A2-202ENST00000372748 NIPSNAP3BQ9BS92 247 aa12.83□□□□□ -0.36
COL9A2-202ENST00000372748 GLRX2Q9NS18 164 aa12.83□□□□□ -0.36
COL9A2-202ENST00000372748 IGLV3-12A0A075B6K2 115 aa12.82□□□□□ -0.36
COL9A2-202ENST00000372748 SCAF4O95104 1147 aaKnown RBP12.82□□□□□ -0.36
COL9A2-202ENST00000372748 MSR1P21757 451 aa12.82□□□□□ -0.36
COL9A2-202ENST00000372748 AADACP22760 399 aa12.82□□□□□ -0.36
COL9A2-202ENST00000372748 ENDOGQ14249 297 aaKnown RBP12.82□□□□□ -0.36
COL9A2-202ENST00000372748 HIST3H3Q16695 136 aa12.82□□□□□ -0.36
COL9A2-202ENST00000372748 RABEPKQ7Z6M1 372 aa12.82□□□□□ -0.36
COL9A2-202ENST00000372748 GJC3Q8NFK1 279 aa12.82□□□□□ -0.36
COL9A2-202ENST00000372748 UNKLQ9H9P5 680 aaKnown RBP12.82□□□□□ -0.36
COL9A2-202ENST00000372748 KIAA1456Q9P272 454 aa12.82□□□□□ -0.36
COL9A2-202ENST00000372748 NCOR1O75376 2440 aa12.82□□□□□ -0.36
COL9A2-202ENST00000372748 A0A0U1RQV5 110 aa12.82□□□□□ -0.36
COL9A2-202ENST00000372748 CELA2AP08217 269 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms