RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 TUBA4BQ9H853 241 aa11□□□□□ -0.65
CTPS1-202ENST00000372621 C19orf12Q9NSK7 152 aa11□□□□□ -0.65
CTPS1-202ENST00000372621 SLC7A11Q9UPY5 501 aa11□□□□□ -0.65
CTPS1-202ENST00000372621 FREM2Q5SZK8 3169 aa11□□□□□ -0.65
CTPS1-202ENST00000372621 ZNF816-ZNF321PA0A0X1KG74 233 aa11□□□□□ -0.65
CTPS1-202ENST00000372621 LRRC3CA6NJW4 275 aa11□□□□□ -0.65
CTPS1-202ENST00000372621 CXCL13O43927 109 aa11□□□□□ -0.65
CTPS1-202ENST00000372621 PPYP01298 95 aa11□□□□□ -0.65
CTPS1-202ENST00000372621 RFPL3SP0C7P2 107 aa11□□□□□ -0.65
CTPS1-202ENST00000372621 PLCXD3Q63HM9 321 aa11□□□□□ -0.65
CTPS1-202ENST00000372621 OR14L1PQ8NHC6 308 aa11□□□□□ -0.65
CTPS1-202ENST00000372621 C14orf79Q96F83 325 aa11□□□□□ -0.65
CTPS1-202ENST00000372621 POM121Q96HA1 1249 aa11□□□□□ -0.65
CTPS1-202ENST00000372621 USB1Q9BQ65 265 aaKnown RBP11□□□□□ -0.65
CTPS1-202ENST00000372621 GPR35Q9HC97 309 aa11□□□□□ -0.65
CTPS1-202ENST00000372621 STRAPQ9Y3F4 350 aaKnown RBP11□□□□□ -0.65
CTPS1-202ENST00000372621 C1QL1O75973 258 aa10.99□□□□□ -0.65
CTPS1-202ENST00000372621 FUT3P21217 361 aa10.99□□□□□ -0.65
CTPS1-202ENST00000372621 AKR1C3P42330 323 aa10.99□□□□□ -0.65
CTPS1-202ENST00000372621 NOVA1P51513 510 aaKnown RBP10.99□□□□□ -0.65
CTPS1-202ENST00000372621 ZNF616Q08AN1 781 aa10.99□□□□□ -0.65
CTPS1-202ENST00000372621 TRA2AQ13595 282 aaKnown RBP eCLIP10.99□□□□□ -0.65
CTPS1-202ENST00000372621 RNF212Q495C1 297 aa10.99□□□□□ -0.65
CTPS1-202ENST00000372621 AWAT1Q58HT5 328 aa10.99□□□□□ -0.65
CTPS1-202ENST00000372621 Q6ZS49 121 aa10.99□□□□□ -0.65
CTPS1-202ENST00000372621 CCDC71LQ8N9Z2 235 aa10.99□□□□□ -0.65
CTPS1-202ENST00000372621 SLC39A7Q92504 469 aa10.99□□□□□ -0.65
CTPS1-202ENST00000372621 BOD1Q96IK1 185 aa10.99□□□□□ -0.65
CTPS1-202ENST00000372621 C1QTNF5Q9BXJ0 243 aa10.99□□□□□ -0.65
CTPS1-202ENST00000372621 MPPED1O15442 326 aa10.99□□□□□ -0.65
CTPS1-202ENST00000372621 CAMLGP49069 296 aa10.99□□□□□ -0.65
CTPS1-202ENST00000372621 PCBD1P61457 104 aa10.99□□□□□ -0.65
CTPS1-202ENST00000372621 Q0VFX4 171 aa10.99□□□□□ -0.65
CTPS1-202ENST00000372621 OR10D3Q8NH80 312 aa10.99□□□□□ -0.65
CTPS1-202ENST00000372621 PIGCQ92535 297 aa10.99□□□□□ -0.65
CTPS1-202ENST00000372621 SIT1Q9Y3P8 196 aa10.99□□□□□ -0.65
CTPS1-202ENST00000372621 C3orf85A0A1B0GTC6 90 aa10.99□□□□□ -0.65
CTPS1-202ENST00000372621 C7orf77A4D0Y5 90 aa10.99□□□□□ -0.65
CTPS1-202ENST00000372621 PTAFRP25105 342 aa10.99□□□□□ -0.65
CTPS1-202ENST00000372621 GNRHRP30968 328 aa10.99□□□□□ -0.65
CTPS1-202ENST00000372621 GLP1RP43220 463 aa10.99□□□□□ -0.65
CTPS1-202ENST00000372621 NPBWR2P48146 333 aa10.99□□□□□ -0.65
CTPS1-202ENST00000372621 MEOX2P50222 304 aa10.99□□□□□ -0.65
CTPS1-202ENST00000372621 IGSF11Q5DX21 431 aa10.99□□□□□ -0.65
CTPS1-202ENST00000372621 COLCA1Q6ZS62 124 aa10.99□□□□□ -0.65
CTPS1-202ENST00000372621 ZNF611Q8N823 705 aa10.99□□□□□ -0.65
CTPS1-202ENST00000372621 OR2V1Q8NHB1 315 aa10.99□□□□□ -0.65
CTPS1-202ENST00000372621 TMEM222Q9H0R3 208 aa10.99□□□□□ -0.65
CTPS1-202ENST00000372621 RPS10P5Q9NQ39 176 aa10.99□□□□□ -0.65
CTPS1-202ENST00000372621 P4HTMQ9NXG6 502 aa10.99□□□□□ -0.65
CTPS1-202ENST00000372621 FBXO9Q9UK97 447 aaPredicted RBP10.99□□□□□ -0.65
CTPS1-202ENST00000372621 K7N7A8 449 aa10.98□□□□□ -0.65
CTPS1-202ENST00000372621 CDS2O95674 445 aa10.98□□□□□ -0.65
CTPS1-202ENST00000372621 P04436 131 aa10.98□□□□□ -0.65
CTPS1-202ENST00000372621 ZNF44P15621 663 aa10.98□□□□□ -0.65
CTPS1-202ENST00000372621 FOLR3P41439 243 aa10.98□□□□□ -0.65
CTPS1-202ENST00000372621 EWSR1Q01844 656 aaKnown RBP eCLIP10.98□□□□□ -0.65
CTPS1-202ENST00000372621 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.98□□□□□ -0.65
CTPS1-202ENST00000372621 CPEB3Q8NE35 698 aaKnown RBP10.98□□□□□ -0.65
CTPS1-202ENST00000372621 IP6K3Q96PC2 410 aa10.98□□□□□ -0.65
CTPS1-202ENST00000372621 TAAR9Q96RI9 348 aa10.98□□□□□ -0.65
CTPS1-202ENST00000372621 PRDM14Q9GZV8 571 aa10.98□□□□□ -0.65
CTPS1-202ENST00000372621 A0A1B0GW64 132 aa10.98□□□□□ -0.65
CTPS1-202ENST00000372621 TRDCB7Z8K6 153 aa10.98□□□□□ -0.65
CTPS1-202ENST00000372621 AGAP20933 346 aa10.98□□□□□ -0.65
CTPS1-202ENST00000372621 RAB5BP61020 215 aa10.98□□□□□ -0.65
CTPS1-202ENST00000372621 HERV-K104P61576 105 aa10.98□□□□□ -0.65
CTPS1-202ENST00000372621 SRSF7Q16629 238 aaKnown RBP eCLIP10.98□□□□□ -0.65
CTPS1-202ENST00000372621 FAM185AQ8N0U4 392 aa10.98□□□□□ -0.65
CTPS1-202ENST00000372621 TMEM56Q96MV1 263 aa10.98□□□□□ -0.65
CTPS1-202ENST00000372621 SPACA1Q9HBV2 294 aa10.98□□□□□ -0.65
CTPS1-202ENST00000372621 TMEM56-RWDD3S4R434 201 aa10.98□□□□□ -0.65
CTPS1-202ENST00000372621 NKX2-6A6NCS4 301 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 C5orf52A6NGY3 159 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 RPL36A-HNRNPH2H7BZ11 118 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 CYTIPO60759 359 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 EIF3GO75821 320 aaKnown RBP eCLIP10.97□□□□□ -0.65
CTPS1-202ENST00000372621 MT-ND4LP03901 98 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 CDCP2Q5VXM1 449 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 HSD17B11Q8NBQ5 300 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 EIF5A2Q9GZV4 153 aaKnown RBP10.97□□□□□ -0.65
CTPS1-202ENST00000372621 ZNF442Q9H7R0 627 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 RYDENQ9NUL5 291 aaKnown RBP10.97□□□□□ -0.65
CTPS1-202ENST00000372621 PCSK5Q92824 1860 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 FAM90A10PA6NDY2 464 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 FAM90A18PA6NE21 464 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 FAM90A16PA6NEW6 464 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 FAM90A20PA6NIJ5 464 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 FAM90A8PA6NJQ4 464 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 FAM90A7PA6NKC0 464 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 FAM90A22PA8MWA6 464 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 FAM90A12PA8MX19 464 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 FAM90A5PA8MXJ8 464 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 FAM90A23PA8MXZ1 464 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 YKT6O15498 198 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 OR7C1O76099 320 aaPredicted RBP10.97□□□□□ -0.65
CTPS1-202ENST00000372621 FAM90A15PP0C7V4 464 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 FAM90A13PP0C7W8 464 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 FAM90A14PP0C7W9 464 aa10.97□□□□□ -0.65
CTPS1-202ENST00000372621 FAM90A24PP0C7X0 464 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms