RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 AK3Q9UIJ7 227 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 CA14Q9ULX7 337 aa4.72□□□□□ -1.65
ATG4A-204ENST00000372246 C14orf166Q9Y224 244 aaKnown RBP4.72□□□□□ -1.65
ATG4A-204ENST00000372246 A0A087WZY1 265 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 FAM230AA0A1W2PPH8 454 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 OR5H1A6NKK0 313 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 A8MXE2 369 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 NUDT19A8MXV4 375 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 C1QTNF9BB2RNN3 333 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 TMEM150CB9EJG8 249 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 ZNF587BE7ETH6 402 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 LINC01565O15544 149 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 DDAH2O95865 285 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 ISG15P05161 165 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 SRP19P09132 144 aaKnown RBP4.71□□□□□ -1.66
ATG4A-204ENST00000372246 THEGLP0DJG4 465 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 CCL5P13501 91 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 SUCLG1P53597 346 aaKnown RBP4.71□□□□□ -1.66
ATG4A-204ENST00000372246 ERVS71-1P61550 626 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 FAM3AP98173 230 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 HSF1Q00613 529 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 EWSR1Q01844 656 aaKnown RBP eCLIP4.71□□□□□ -1.66
ATG4A-204ENST00000372246 ICAM4Q14773 271 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 VAX1Q5SQQ9 334 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 EIF5AL1Q6IS14 154 aaKnown RBP4.71□□□□□ -1.66
ATG4A-204ENST00000372246 OPN5Q6U736 354 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 LCN15Q6UWW0 184 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 FBXW12Q6X9E4 464 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 REC114Q7Z4M0 266 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 DPPA2Q7Z7J5 298 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 SGPP2Q8IWX5 399 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 ODF3L1Q8IXM7 274 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 ZNF283Q8N7M2 679 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 SLC35G3Q8N808 338 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 DTWD2Q8NBA8 298 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 ZNF721Q8TF20 911 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 RTN4IP1Q8WWV3 396 aaPredicted RBP4.71□□□□□ -1.66
ATG4A-204ENST00000372246 ASB10Q8WXI3 467 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 ADIPOR1Q96A54 375 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 ELOVL1Q9BW60 279 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 SLC25A31Q9H0C2 315 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 RIMS4Q9H426 269 aaPredicted RBP4.71□□□□□ -1.66
ATG4A-204ENST00000372246 PLEKHJ1Q9NW61 149 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 PPIAL4AQ9Y536 164 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 NCOA6Q14686 2063 aaPredicted RBP4.71□□□□□ -1.66
ATG4A-204ENST00000372246 NSG1A0A0A6YYJ2 146 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 MARCH11A6NNE9 402 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 FTCDNL1E5RQL4 147 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 K7N7A8 449 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 NPIPB7O75200 414 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 POU2F2P09086 479 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 GZMBP10144 247 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 MPZP25189 248 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 PAX6P26367 422 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 FOXF1Q12946 379 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 NSDHLQ15738 373 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 ARMC6Q6NXE6 501 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 RABEPKQ7Z6M1 372 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 OOSP2Q86WS3 158 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 UBALD1Q8TB05 177 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 HAS2Q92819 552 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 LURAP1Q96LR2 239 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 RSG1Q9BU20 258 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 ZNF665Q9H7R5 613 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 C1orf123Q9NWV4 160 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 P4HTMQ9NXG6 502 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 OR14J1Q9UGF5 321 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 SUSD2Q9UGT4 822 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 R4GN57 208 aa4.71□□□□□ -1.66
ATG4A-204ENST00000372246 CHD3Q12873 2000 aaKnown RBP4.71□□□□□ -1.66
ATG4A-204ENST00000372246 CRYM-AS1A6NIL9 109 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 J3KRW8 73 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 TOX3O15405 576 aaPredicted RBP4.7□□□□□ -1.66
ATG4A-204ENST00000372246 AMBPP02760 352 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 APODP05090 189 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 PET100P0DJ07 73 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 GZMHP20718 246 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 BMI1P35226 326 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 P2RY1P47900 373 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 GNB2P62879 340 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 HSD11B2P80365 405 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 TMEM267Q0VDI3 215 aaPredicted RBP4.7□□□□□ -1.66
ATG4A-204ENST00000372246 RHEBQ15382 184 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 LBHQ53QV2 105 aaPredicted RBP4.7□□□□□ -1.66
ATG4A-204ENST00000372246 PHYHD1Q5SRE7 291 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 AKR1C8PQ5T2L2 129 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 COL13A1Q5TAT6 717 aaPredicted RBP4.7□□□□□ -1.66
ATG4A-204ENST00000372246 SLC22A25Q6T423 547 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 OR5C1Q8NGR4 320 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 KCNG3Q8TAE7 436 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 GPBAR1Q8TDU6 330 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 RBMXL1Q96E39 390 aaKnown RBP4.7□□□□□ -1.66
ATG4A-204ENST00000372246 MALSU1Q96EH3 234 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 FAM210BQ96KR6 192 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 MRGPRX1Q96LB2 322 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 B3GAT1Q9P2W7 334 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 CYP8B1Q9UNU6 501 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 KCNIP3Q9Y2W7 256 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 WSB1Q9Y6I7 421 aa4.7□□□□□ -1.66
ATG4A-204ENST00000372246 BOD1L1Q8NFC6 3051 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms