RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 GMPPAQ96IJ6 420 aaPredicted RBP12.09□□□□□ -0.47
LDB3-204ENST00000372066 POM121L2Q96KW2 1035 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 ARL6Q9H0F7 186 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 C5orf66Q9H5L9 145 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 RAB18Q9NP72 206 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 ZNF701Q9NV72 531 aaPredicted RBP12.09□□□□□ -0.47
LDB3-204ENST00000372066 C14orf166Q9Y224 244 aaKnown RBP12.09□□□□□ -0.47
LDB3-204ENST00000372066 LIPGQ9Y5X9 500 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 DNAJC13O75165 2243 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 ZNF407Q9C0G0 2248 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 ANGPTL7O43827 346 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 HLA-HP01893 362 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 CD79AP11912 226 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 CALCRP30988 508 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 APLNRP35414 380 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 RBM11P57052 281 aaKnown RBP12.09□□□□□ -0.47
LDB3-204ENST00000372066 RAB1AP62820 205 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 UBA52P62987 128 aaKnown RBP12.09□□□□□ -0.47
LDB3-204ENST00000372066 NHLRC3Q5JS37 347 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 NKAPLQ5M9Q1 402 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 TMEM211Q6ICI0 200 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 GSG1LQ6UXU4 331 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 NUFIP2Q7Z417 695 aaKnown RBP12.09□□□□□ -0.47
LDB3-204ENST00000372066 ZNF546Q86UE3 836 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 SLC51BQ86UW2 128 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 TMEM200AQ86VY9 491 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 CCDC36Q8IYA8 594 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 OR5L1Q8NGL2 311 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 SCARB1Q8WTV0 552 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 WDR89Q96FK6 387 aaPredicted RBP12.09□□□□□ -0.47
LDB3-204ENST00000372066 CMSS1Q9BQ75 279 aaKnown RBP12.09□□□□□ -0.47
LDB3-204ENST00000372066 NMES1Q9C002 83 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 DECR2Q9NUI1 292 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 ANXA10Q9UJ72 324 aa12.09□□□□□ -0.47
LDB3-204ENST00000372066 RTTNQ86VV8 2226 aa12.08□□□□□ -0.48
LDB3-204ENST00000372066 A0A096LPE4 126 aa12.08□□□□□ -0.48
LDB3-204ENST00000372066 A0A1W2PPZ6 126 aa12.08□□□□□ -0.48
LDB3-204ENST00000372066 PQLC2LA1A4F0 135 aa12.08□□□□□ -0.48
LDB3-204ENST00000372066 C5orf49A4QMS7 147 aa12.08□□□□□ -0.48
LDB3-204ENST00000372066 PDCD6O75340 191 aa12.08□□□□□ -0.48
LDB3-204ENST00000372066 NPY4RP50391 375 aa12.08□□□□□ -0.48
LDB3-204ENST00000372066 AP2S1P53680 142 aaPredicted RBP12.08□□□□□ -0.48
LDB3-204ENST00000372066 TESK1Q15569 626 aa12.08□□□□□ -0.48
LDB3-204ENST00000372066 DMRTC1Q5HYR2 192 aa12.08□□□□□ -0.48
LDB3-204ENST00000372066 AADACL3Q5VUY0 350 aa12.08□□□□□ -0.48
LDB3-204ENST00000372066 SIGIRRQ6IA17 410 aa12.08□□□□□ -0.48
LDB3-204ENST00000372066 ELP2Q6IA86 826 aa12.08□□□□□ -0.48
LDB3-204ENST00000372066 ZDHHC23Q8IYP9 409 aa12.08□□□□□ -0.48
LDB3-204ENST00000372066 KCNRGQ8N5I3 272 aa12.08□□□□□ -0.48
LDB3-204ENST00000372066 OR56B2PQ8NGI1 322 aa12.08□□□□□ -0.48
LDB3-204ENST00000372066 OR51F2Q8NH61 342 aa12.08□□□□□ -0.48
LDB3-204ENST00000372066 CASTOR1Q8WTX7 329 aa12.08□□□□□ -0.48
LDB3-204ENST00000372066 TMEM230Q96A57 120 aa12.08□□□□□ -0.48
LDB3-204ENST00000372066 PAPOLGQ9BWT3 736 aaKnown RBP12.08□□□□□ -0.48
LDB3-204ENST00000372066 DEFB127Q9H1M4 99 aa12.08□□□□□ -0.48
LDB3-204ENST00000372066 NECAP2Q9NVZ3 263 aa12.08□□□□□ -0.48
LDB3-204ENST00000372066 SPRR3Q9UBC9 169 aa12.08□□□□□ -0.48
LDB3-204ENST00000372066 TNFSF18Q9UNG2 199 aa12.08□□□□□ -0.48
LDB3-204ENST00000372066 ADGRG4Q8IZF6 3080 aa12.08□□□□□ -0.48
LDB3-204ENST00000372066 AKAP9Q99996 3911 aa12.07□□□□□ -0.48
LDB3-204ENST00000372066 IGKV1-12A0A0C4DH73 117 aa12.07□□□□□ -0.48
LDB3-204ENST00000372066 ZNF850A8MQ14 1090 aa12.07□□□□□ -0.48
LDB3-204ENST00000372066 LEUTXA8MZ59 168 aa12.07□□□□□ -0.48
LDB3-204ENST00000372066 CFDP00746 253 aaPredicted RBP12.07□□□□□ -0.48
LDB3-204ENST00000372066 IGKV1D-12P01611 117 aa12.07□□□□□ -0.48
LDB3-204ENST00000372066 CTSDP07339 412 aaPredicted RBP12.07□□□□□ -0.48
LDB3-204ENST00000372066 FCGR3AP08637 254 aa12.07□□□□□ -0.48
LDB3-204ENST00000372066 PRDX4Q13162 271 aa12.07□□□□□ -0.48
LDB3-204ENST00000372066 TAF9Q16594 264 aa12.07□□□□□ -0.48
LDB3-204ENST00000372066 CEACAM21Q3KPI0 293 aa12.07□□□□□ -0.48
LDB3-204ENST00000372066 C9orf135Q5VTT2 229 aa12.07□□□□□ -0.48
LDB3-204ENST00000372066 ZNF611Q8N823 705 aa12.07□□□□□ -0.48
LDB3-204ENST00000372066 THAP6Q8TBB0 222 aa12.07□□□□□ -0.48
LDB3-204ENST00000372066 RND1Q92730 232 aa12.07□□□□□ -0.48
LDB3-204ENST00000372066 BCL2L2Q92843 193 aaPredicted RBP12.07□□□□□ -0.48
LDB3-204ENST00000372066 RTBDNQ9BSG5 229 aaPredicted RBP12.07□□□□□ -0.48
LDB3-204ENST00000372066 MED9Q9NWA0 146 aa12.07□□□□□ -0.48
LDB3-204ENST00000372066 AK3Q9UIJ7 227 aa12.07□□□□□ -0.48
LDB3-204ENST00000372066 ST3GAL6Q9Y274 331 aa12.07□□□□□ -0.48
LDB3-204ENST00000372066 MPC1Q9Y5U8 109 aa12.07□□□□□ -0.48
LDB3-204ENST00000372066 C2CD3Q4AC94 2353 aa12.07□□□□□ -0.48
LDB3-204ENST00000372066 DCHS2Q6V1P9 2916 aa12.07□□□□□ -0.48
LDB3-204ENST00000372066 FAM90A27PA6NNH2 459 aa12.06□□□□□ -0.48
LDB3-204ENST00000372066 CNOT4O95628 575 aaKnown RBP12.06□□□□□ -0.48
LDB3-204ENST00000372066 PLATP00750 562 aa12.06□□□□□ -0.48
LDB3-204ENST00000372066 FUT3P21217 361 aa12.06□□□□□ -0.48
LDB3-204ENST00000372066 SRSF7Q16629 238 aaKnown RBP eCLIP12.06□□□□□ -0.48
LDB3-204ENST00000372066 SPNS3Q6ZMD2 512 aa12.06□□□□□ -0.48
LDB3-204ENST00000372066 ACOT7LQ6ZUV0 252 aa12.06□□□□□ -0.48
LDB3-204ENST00000372066 P4HA3Q7Z4N8 544 aa12.06□□□□□ -0.48
LDB3-204ENST00000372066 LINC00596Q86U02 117 aa12.06□□□□□ -0.48
LDB3-204ENST00000372066 MKXQ8IYA7 352 aa12.06□□□□□ -0.48
LDB3-204ENST00000372066 FBXL14Q8N1E6 418 aa12.06□□□□□ -0.48
LDB3-204ENST00000372066 OR10AD1Q8NGE0 317 aa12.06□□□□□ -0.48
LDB3-204ENST00000372066 OR5A2Q8NGI9 324 aa12.06□□□□□ -0.48
LDB3-204ENST00000372066 PPP1R1CQ8WVI7 109 aa12.06□□□□□ -0.48
LDB3-204ENST00000372066 ZNF286AQ9HBT8 521 aa12.06□□□□□ -0.48
LDB3-204ENST00000372066 CLCF1Q9UBD9 225 aa12.06□□□□□ -0.48
LDB3-204ENST00000372066 A0A1B0GW55 424 aa12.05□□□□□ -0.48
LDB3-204ENST00000372066 KANTRA0A1W2PQU2 76 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms