RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 GPR176Q14439 515 aa12.26□□□□□ -0.45
COL9A1-204ENST00000370496 GRK1Q15835 563 aa12.26□□□□□ -0.45
COL9A1-204ENST00000370496 PIGYQ3MUY2 71 aa12.26□□□□□ -0.45
COL9A1-204ENST00000370496 C1orf229Q6ZS94 237 aaPredicted RBP12.26□□□□□ -0.45
COL9A1-204ENST00000370496 CMTM4Q8IZR5 234 aa12.26□□□□□ -0.45
COL9A1-204ENST00000370496 OR8H2Q8N162 312 aa12.26□□□□□ -0.45
COL9A1-204ENST00000370496 OR4D6Q8NGJ1 314 aa12.26□□□□□ -0.45
COL9A1-204ENST00000370496 PPP1R35Q8TAP8 253 aa12.26□□□□□ -0.45
COL9A1-204ENST00000370496 NANPQ8TBE9 248 aa12.26□□□□□ -0.45
COL9A1-204ENST00000370496 FOXRED1Q96CU9 486 aaPredicted RBP12.26□□□□□ -0.45
COL9A1-204ENST00000370496 PCGF1Q9BSM1 259 aa12.26□□□□□ -0.45
COL9A1-204ENST00000370496 CHST6Q9GZX3 395 aa12.26□□□□□ -0.45
COL9A1-204ENST00000370496 ANK3Q12955 4377 aaKnown RBP12.26□□□□□ -0.45
COL9A1-204ENST00000370496 NF1P21359 2839 aa12.25□□□□□ -0.45
COL9A1-204ENST00000370496 TRAV40A0A0B4J280 105 aa12.25□□□□□ -0.45
COL9A1-204ENST00000370496 K7N7A8 449 aa12.25□□□□□ -0.45
COL9A1-204ENST00000370496 ZNF737O75373 536 aa12.25□□□□□ -0.45
COL9A1-204ENST00000370496 TOX4O94842 621 aa12.25□□□□□ -0.45
COL9A1-204ENST00000370496 GTF2F2P13984 249 aa12.25□□□□□ -0.45
COL9A1-204ENST00000370496 HOXB4P17483 251 aaPredicted RBP12.25□□□□□ -0.45
COL9A1-204ENST00000370496 RBM11P57052 281 aaKnown RBP12.25□□□□□ -0.45
COL9A1-204ENST00000370496 RPL31P62899 125 aaKnown RBP12.25□□□□□ -0.45
COL9A1-204ENST00000370496 IL13RA2Q14627 380 aa12.25□□□□□ -0.45
COL9A1-204ENST00000370496 SYT6Q5T7P8 510 aaPredicted RBP12.25□□□□□ -0.45
COL9A1-204ENST00000370496 ASCL4Q6XD76 172 aa12.25□□□□□ -0.45
COL9A1-204ENST00000370496 OSR2Q8N2R0 312 aa12.25□□□□□ -0.45
COL9A1-204ENST00000370496 KIR3DL3Q8N743 410 aa12.25□□□□□ -0.45
COL9A1-204ENST00000370496 CHST4Q8NCG5 386 aa12.25□□□□□ -0.45
COL9A1-204ENST00000370496 OR4M1Q8NGD0 313 aa12.25□□□□□ -0.45
COL9A1-204ENST00000370496 C8orf46Q8TAG6 207 aa12.25□□□□□ -0.45
COL9A1-204ENST00000370496 TBC1D15Q8TC07 691 aa12.25□□□□□ -0.45
COL9A1-204ENST00000370496 SNX22Q96L94 193 aa12.25□□□□□ -0.45
COL9A1-204ENST00000370496 WDFY2Q96P53 400 aa12.25□□□□□ -0.45
COL9A1-204ENST00000370496 SEBOXQ9HB31 216 aaPredicted RBP12.25□□□□□ -0.45
COL9A1-204ENST00000370496 PLGRKTQ9HBL7 147 aa12.25□□□□□ -0.45
COL9A1-204ENST00000370496 C19orf12Q9NSK7 152 aa12.25□□□□□ -0.45
COL9A1-204ENST00000370496 STUB1Q9UNE7 303 aa12.25□□□□□ -0.45
COL9A1-204ENST00000370496 SETD2Q9BYW2 2564 aaPredicted RBP12.25□□□□□ -0.45
COL9A1-204ENST00000370496 ZFHX3Q15911 3703 aa12.24□□□□□ -0.45
COL9A1-204ENST00000370496 TRDV1A0A1B0GX56 115 aa12.24□□□□□ -0.45
COL9A1-204ENST00000370496 A0A1W2PPH5 198 aa12.24□□□□□ -0.45
COL9A1-204ENST00000370496 TMEM82A0PJX8 343 aa12.24□□□□□ -0.45
COL9A1-204ENST00000370496 HSPB6O14558 160 aa12.24□□□□□ -0.45
COL9A1-204ENST00000370496 DEGS1O15121 323 aa12.24□□□□□ -0.45
COL9A1-204ENST00000370496 CRTAPO75718 401 aaPredicted RBP12.24□□□□□ -0.45
COL9A1-204ENST00000370496 EPHA1P21709 976 aa12.24□□□□□ -0.45
COL9A1-204ENST00000370496 GALP22466 123 aa12.24□□□□□ -0.45
COL9A1-204ENST00000370496 ARF6P62330 175 aa12.24□□□□□ -0.45
COL9A1-204ENST00000370496 BLMHQ13867 455 aa12.24□□□□□ -0.45
COL9A1-204ENST00000370496 C22orf42Q6IC83 251 aa12.24□□□□□ -0.45
COL9A1-204ENST00000370496 CD200R1LQ6Q8B3 271 aa12.24□□□□□ -0.45
COL9A1-204ENST00000370496 C17orf107Q6ZR85 190 aa12.24□□□□□ -0.45
COL9A1-204ENST00000370496 LY6G5BQ8NDX9 201 aa12.24□□□□□ -0.45
COL9A1-204ENST00000370496 OR51T1Q8NGJ9 327 aa12.24□□□□□ -0.45
COL9A1-204ENST00000370496 OR5D13Q8NGL4 314 aa12.24□□□□□ -0.45
COL9A1-204ENST00000370496 POM121Q96HA1 1249 aa12.24□□□□□ -0.45
COL9A1-204ENST00000370496 PPA2Q9H2U2 334 aa12.24□□□□□ -0.45
COL9A1-204ENST00000370496 ST3GAL6Q9Y274 331 aa12.24□□□□□ -0.45
COL9A1-204ENST00000370496 KPTNQ9Y664 436 aa12.24□□□□□ -0.45
COL9A1-204ENST00000370496 C2CD3Q4AC94 2353 aa12.24□□□□□ -0.45
COL9A1-204ENST00000370496 A0A1W2PP11 408 aa12.23□□□□□ -0.45
COL9A1-204ENST00000370496 PSPNO60542 156 aa12.23□□□□□ -0.45
COL9A1-204ENST00000370496 OR7C1O76099 320 aaPredicted RBP12.23□□□□□ -0.45
COL9A1-204ENST00000370496 UBBP0CG47 229 aa12.23□□□□□ -0.45
COL9A1-204ENST00000370496 HTR2CP28335 458 aa12.23□□□□□ -0.45
COL9A1-204ENST00000370496 OR3A1P47881 315 aa12.23□□□□□ -0.45
COL9A1-204ENST00000370496 PDCD1Q15116 288 aa12.23□□□□□ -0.45
COL9A1-204ENST00000370496 PAN3Q58A45 887 aaKnown RBP12.23□□□□□ -0.45
COL9A1-204ENST00000370496 LINC00596Q86U02 117 aa12.23□□□□□ -0.45
COL9A1-204ENST00000370496 OR4S1Q8NGB4 309 aa12.23□□□□□ -0.45
COL9A1-204ENST00000370496 OR6M1Q8NGM8 313 aa12.23□□□□□ -0.45
COL9A1-204ENST00000370496 FAM46BQ96A09 425 aa12.23□□□□□ -0.45
COL9A1-204ENST00000370496 UPRTQ96BW1 309 aa12.23□□□□□ -0.45
COL9A1-204ENST00000370496 DMRTB1Q96MA1 342 aa12.23□□□□□ -0.45
COL9A1-204ENST00000370496 SIRPDQ9H106 197 aa12.23□□□□□ -0.45
COL9A1-204ENST00000370496 CST11Q9H112 138 aa12.23□□□□□ -0.45
COL9A1-204ENST00000370496 GHRLQ9UBU3 117 aa12.23□□□□□ -0.45
COL9A1-204ENST00000370496 SSR3Q9UNL2 185 aa12.23□□□□□ -0.45
COL9A1-204ENST00000370496 AK6Q9Y3D8 172 aaKnown RBP12.23□□□□□ -0.45
COL9A1-204ENST00000370496 NIPBLQ6KC79 2804 aaeCLIP12.22□□□□□ -0.45
COL9A1-204ENST00000370496 IGHV3OR16-10A0A075B7F0 116 aa12.22□□□□□ -0.45
COL9A1-204ENST00000370496 SLC33A1O00400 549 aaPredicted RBP12.22□□□□□ -0.45
COL9A1-204ENST00000370496 PDCD5O14737 125 aa12.22□□□□□ -0.45
COL9A1-204ENST00000370496 MGST3O14880 152 aa12.22□□□□□ -0.45
COL9A1-204ENST00000370496 FSHBP01225 129 aa12.22□□□□□ -0.45
COL9A1-204ENST00000370496 IFNA2P01563 188 aa12.22□□□□□ -0.45
COL9A1-204ENST00000370496 MMP9P14780 707 aa12.22□□□□□ -0.45
COL9A1-204ENST00000370496 MGMTP16455 207 aa12.22□□□□□ -0.45
COL9A1-204ENST00000370496 CD36P16671 472 aa12.22□□□□□ -0.45
COL9A1-204ENST00000370496 ATXN7L3Q14CW9 347 aaPredicted RBP12.22□□□□□ -0.45
COL9A1-204ENST00000370496 NHLRC3Q5JS37 347 aa12.22□□□□□ -0.45
COL9A1-204ENST00000370496 GPR157Q5UAW9 335 aa12.22□□□□□ -0.45
COL9A1-204ENST00000370496 Q6P435 159 aa12.22□□□□□ -0.45
COL9A1-204ENST00000370496 VMO1Q7Z5L0 202 aa12.22□□□□□ -0.45
COL9A1-204ENST00000370496 LYPD6Q86Y78 171 aa12.22□□□□□ -0.45
COL9A1-204ENST00000370496 BPIFB2Q8N4F0 458 aa12.22□□□□□ -0.45
COL9A1-204ENST00000370496 Q8NFD4 153 aa12.22□□□□□ -0.45
COL9A1-204ENST00000370496 TBX15Q96SF7 602 aa12.22□□□□□ -0.45
COL9A1-204ENST00000370496 BANF2Q9H503 90 aa12.22□□□□□ -0.45
COL9A1-204ENST00000370496 SIRT7Q9NRC8 400 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms