RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 RNF7Q9UBF6 113 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 TMEFF2Q9UIK5 374 aaPredicted RBP7.54□□□□□ -1.2
ABCA4-201ENST00000370225 C5orf67F2Z3F1 127 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 GNG7O60262 68 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 CD96P40200 585 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 CLDN20P56880 219 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 C12orf73Q69YU5 71 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 ETV3LQ6ZN32 361 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 OR5C1Q8NGR4 320 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 LURAP1Q96LR2 239 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 RAB18Q9NP72 206 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 ASCL3Q9NQ33 180 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 ZNF275Q9NSD4 429 aaPredicted RBP7.54□□□□□ -1.2
ABCA4-201ENST00000370225 EPOPA6NHQ4 379 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 LIPT2A6NK58 231 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 CD200P41217 278 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 AESQ08117 197 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 TGIF1Q15583 401 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 ZNF141Q15928 474 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 PRSS42Q7Z5A4 293 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 OR6X1Q8NH79 312 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 FLYWCH2Q96CP2 140 aaKnown RBP7.54□□□□□ -1.2
ABCA4-201ENST00000370225 LRRC3BQ96PB8 259 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 WDR13Q9H1Z4 485 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 COL18A1P39060 1754 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 ARAP2Q8WZ64 1704 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 TDRD6O60522 2096 aaKnown RBP7.54□□□□□ -1.2
ABCA4-201ENST00000370225 LANCL1O43813 399 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 SCGB1C2P0DMR2 95 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 G6PCP35575 357 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 TRAT1Q6PIZ9 186 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 DYNC2LI1Q8TCX1 351 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 A0A1B0GUH1 482 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 FAM24AA6NFZ4 105 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 SEMA7AO75326 666 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 C1QBP02746 253 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 ZFP36L2P47974 494 aaKnown RBP7.54□□□□□ -1.2
ABCA4-201ENST00000370225 PIGYQ3MUY2 71 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 MESTQ5EB52 335 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 CLEC2AQ6UVW9 174 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 C19orf35Q6ZS72 473 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 OR10A7Q8NGE5 316 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 NUBPLQ8TB37 319 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 GPR35Q9HC97 309 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 GPR27Q9NS67 375 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 CLN8Q9UBY8 286 aa7.54□□□□□ -1.2
ABCA4-201ENST00000370225 NEURL1O76050 574 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 SFTPCP11686 197 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 GNG4P50150 75 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 MMP15P51511 669 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 ZIC1Q15915 447 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 MIDNQ504T8 468 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 A0A1W2PQF6 199 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 MGPP08493 103 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 CD40P25942 277 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 SUMO1P63165 101 aaKnown RBP7.53□□□□□ -1.2
ABCA4-201ENST00000370225 PMS2CLQ68D20 193 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 MOB1BQ7L9L4 216 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 TBC1D26Q86UD7 250 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 C17orf47Q8NEP4 570 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 OR4D10Q8NGI6 311 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 R3HDM4Q96D70 268 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 ZNF665Q9H7R5 613 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 CYSLTR2Q9NS75 346 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 MYO16Q9Y6X6 1858 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 IGHV3OR16-12A0A075B7B8 117 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 OOEPA6NGQ2 149 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 IGHV4-34P06331 123 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 CD82P27701 267 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 RPL13AP40429 203 aaKnown RBP7.53□□□□□ -1.2
ABCA4-201ENST00000370225 MESP2Q0VG99 397 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 C9orf40Q8IXQ3 194 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 SLC22A18ASQ8N1D0 253 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 NHLRC2Q8NBF2 726 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 RNF2Q99496 336 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 OR2H1Q9GZK4 316 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 TMPRSS5Q9H3S3 457 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 TDRD15B5MCY1 1934 aaKnown RBP7.53□□□□□ -1.2
ABCA4-201ENST00000370225 ATP6V1G2-DDX39BF2Z307 99 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 PDCD6O75340 191 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 PMELP40967 661 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 OR2W3Q7Z3T1 314 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 FAM219AQ8IW50 185 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 IGHV3OR16-10A0A075B7F0 116 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 CTAG2O75638 210 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 ACSM4P0C7M7 580 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 LIFP15018 202 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 ACP1P24666 158 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 KCNJ3P48549 501 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 PJVKQ0ZLH3 352 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 PPP1R1AQ13522 171 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 NEIL1Q96FI4 390 aaPredicted RBP7.53□□□□□ -1.2
ABCA4-201ENST00000370225 ZNF488Q96MN9 340 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 P2RX4Q99571 388 aa7.53□□□□□ -1.2
ABCA4-201ENST00000370225 SLC25A10Q9UBX3 287 aaPredicted RBP7.53□□□□□ -1.2
ABCA4-201ENST00000370225 LSM11P83369 360 aaKnown RBP eCLIP7.52□□□□□ -1.2
ABCA4-201ENST00000370225 ZAR1Q86SH2 424 aa7.52□□□□□ -1.2
ABCA4-201ENST00000370225 BAP18Q8IXM2 172 aa7.52□□□□□ -1.2
ABCA4-201ENST00000370225 TRAPPC1Q9Y5R8 145 aa7.52□□□□□ -1.2
ABCA4-201ENST00000370225 A0A1W2PNV4 684 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms