RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 OR4S1Q8NGB4 309 aa20.13■□□□□ 0.81
SNX3-203ENST00000368979 OR4D10Q8NGI6 311 aa20.13■□□□□ 0.81
SNX3-203ENST00000368979 DYRK2Q92630 601 aa20.13■□□□□ 0.81
SNX3-203ENST00000368979 CMSS1Q9BQ75 279 aaKnown RBP20.13■□□□□ 0.81
SNX3-203ENST00000368979 HDHD3Q9BSH5 251 aaPredicted RBP20.13■□□□□ 0.81
SNX3-203ENST00000368979 DPAGT1Q9H3H5 408 aa20.13■□□□□ 0.81
SNX3-203ENST00000368979 PLCE1Q9P212 2302 aa20.13■□□□□ 0.81
SNX3-203ENST00000368979 ADGRG4Q8IZF6 3080 aa20.13■□□□□ 0.81
SNX3-203ENST00000368979 TRAV24A0A0B4J272 114 aa20.12■□□□□ 0.81
SNX3-203ENST00000368979 UBE2QL1A1L167 161 aa20.12■□□□□ 0.81
SNX3-203ENST00000368979 EGR1P18146 543 aa20.12■□□□□ 0.81
SNX3-203ENST00000368979 GIFP27352 417 aa20.12■□□□□ 0.81
SNX3-203ENST00000368979 HLA-DMAP28067 261 aa20.12■□□□□ 0.81
SNX3-203ENST00000368979 HOXA4Q00056 320 aaPredicted RBP20.12■□□□□ 0.81
SNX3-203ENST00000368979 TESK1Q15569 626 aa20.12■□□□□ 0.81
SNX3-203ENST00000368979 SWI5Q1ZZU3 235 aa20.12■□□□□ 0.81
SNX3-203ENST00000368979 OR52W1Q6IF63 320 aa20.12■□□□□ 0.81
SNX3-203ENST00000368979 GCSAMQ8N6F7 178 aa20.12■□□□□ 0.81
SNX3-203ENST00000368979 SUMF2Q8NBJ7 301 aa20.12■□□□□ 0.81
SNX3-203ENST00000368979 Q8TCH9 128 aa20.12■□□□□ 0.81
SNX3-203ENST00000368979 GCM1Q9NP62 436 aa20.12■□□□□ 0.81
SNX3-203ENST00000368979 RASL12Q9NYN1 266 aa20.12■□□□□ 0.81
SNX3-203ENST00000368979 ANKHD1Q8IWZ3 2542 aaKnown RBP20.12■□□□□ 0.81
SNX3-203ENST00000368979 hCG_2014768A0A024R1R8 64 aa20.12■□□□□ 0.81
SNX3-203ENST00000368979 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP20.12■□□□□ 0.81
SNX3-203ENST00000368979 RAB3DO95716 219 aa20.12■□□□□ 0.81
SNX3-203ENST00000368979 GLAP06280 429 aa20.12■□□□□ 0.81
SNX3-203ENST00000368979 DTYMKP23919 212 aa20.12■□□□□ 0.81
SNX3-203ENST00000368979 SMIM21Q3B7S5 101 aa20.12■□□□□ 0.81
SNX3-203ENST00000368979 PLET1Q6UQ28 207 aa20.12■□□□□ 0.81
SNX3-203ENST00000368979 MUC15Q8N387 334 aa20.12■□□□□ 0.81
SNX3-203ENST00000368979 CACNG6Q9BXT2 260 aa20.12■□□□□ 0.81
SNX3-203ENST00000368979 MS4A5Q9H3V2 200 aa20.12■□□□□ 0.81
SNX3-203ENST00000368979 DYNLRB1Q9NP97 96 aa20.12■□□□□ 0.81
SNX3-203ENST00000368979 CHD3Q12873 2000 aaKnown RBP20.11■□□□□ 0.81
SNX3-203ENST00000368979 MCRIP1C9JLW8 97 aa20.11■□□□□ 0.81
SNX3-203ENST00000368979 DEGS1O15121 323 aa20.11■□□□□ 0.81
SNX3-203ENST00000368979 OR2H2O95918 312 aa20.11■□□□□ 0.81
SNX3-203ENST00000368979 KNG1P01042 644 aa20.11■□□□□ 0.81
SNX3-203ENST00000368979 LHBP01229 141 aa20.11■□□□□ 0.81
SNX3-203ENST00000368979 RNF224P0DH78 156 aa20.11■□□□□ 0.81
SNX3-203ENST00000368979 ZNF44P15621 663 aa20.11■□□□□ 0.81
SNX3-203ENST00000368979 TNFRSF1AP19438 455 aa20.11■□□□□ 0.81
SNX3-203ENST00000368979 TBPP20226 339 aa20.11■□□□□ 0.81
SNX3-203ENST00000368979 RBMXP38159 391 aaKnown RBP20.11■□□□□ 0.81
SNX3-203ENST00000368979 CCR6P51684 374 aa20.11■□□□□ 0.81
SNX3-203ENST00000368979 ZCCHC24Q8N2G6 241 aaKnown RBP20.11■□□□□ 0.81
SNX3-203ENST00000368979 UPRTQ96BW1 309 aa20.11■□□□□ 0.81
SNX3-203ENST00000368979 FAIMQ9NVQ4 179 aa20.11■□□□□ 0.81
SNX3-203ENST00000368979 MCUBQ9NWR8 336 aa20.11■□□□□ 0.81
SNX3-203ENST00000368979 COPZ2Q9P299 210 aa20.11■□□□□ 0.81
SNX3-203ENST00000368979 ZNF230Q9UIE0 474 aaPredicted RBP20.11■□□□□ 0.81
SNX3-203ENST00000368979 SH2D1BO14796 132 aa20.1■□□□□ 0.81
SNX3-203ENST00000368979 HAND1O96004 215 aa20.1■□□□□ 0.81
SNX3-203ENST00000368979 FCGR3AP08637 254 aa20.1■□□□□ 0.81
SNX3-203ENST00000368979 CCL8P80075 99 aa20.1■□□□□ 0.81
SNX3-203ENST00000368979 MRPS15P82914 257 aaKnown RBP20.1■□□□□ 0.81
SNX3-203ENST00000368979 SFRP4Q6FHJ7 346 aaPredicted RBP20.1■□□□□ 0.81
SNX3-203ENST00000368979 FAM90A1Q86YD7 464 aa20.1■□□□□ 0.81
SNX3-203ENST00000368979 BEST4Q8NFU0 473 aa20.1■□□□□ 0.81
SNX3-203ENST00000368979 DPCDQ9BVM2 203 aaPredicted RBP20.1■□□□□ 0.81
SNX3-203ENST00000368979 TINAGL1Q9GZM7 467 aaPredicted RBP20.1■□□□□ 0.81
SNX3-203ENST00000368979 CHST6Q9GZX3 395 aa20.1■□□□□ 0.81
SNX3-203ENST00000368979 C12orf4Q9NQ89 552 aa20.1■□□□□ 0.81
SNX3-203ENST00000368979 ZNF701Q9NV72 531 aaPredicted RBP20.1■□□□□ 0.81
SNX3-203ENST00000368979 M0QYG6 137 aa20.09■□□□□ 0.81
SNX3-203ENST00000368979 SLC33A1O00400 549 aaPredicted RBP20.09■□□□□ 0.81
SNX3-203ENST00000368979 RDH5Q92781 318 aa20.09■□□□□ 0.81
SNX3-203ENST00000368979 ST6GALNAC5Q9BVH7 336 aa20.09■□□□□ 0.81
SNX3-203ENST00000368979 RNF7Q9UBF6 113 aa20.09■□□□□ 0.81
SNX3-203ENST00000368979 GLS2Q9UI32 602 aa20.09■□□□□ 0.81
SNX3-203ENST00000368979 SIRPB1O00241 398 aa20.08■□□□□ 0.81
SNX3-203ENST00000368979 HSPB6O14558 160 aa20.08■□□□□ 0.81
SNX3-203ENST00000368979 HS3ST1O14792 307 aa20.08■□□□□ 0.81
SNX3-203ENST00000368979 TCRBP04435 133 aa20.08■□□□□ 0.81
SNX3-203ENST00000368979 ZNF735P0CB33 412 aa20.08■□□□□ 0.81
SNX3-203ENST00000368979 LMO1P25800 156 aa20.08■□□□□ 0.81
SNX3-203ENST00000368979 RBM39Q14498 530 aaKnown RBP20.08■□□□□ 0.81
SNX3-203ENST00000368979 MEF2DQ14814 521 aa20.08■□□□□ 0.81
SNX3-203ENST00000368979 ACTBL2Q562R1 376 aa20.08■□□□□ 0.81
SNX3-203ENST00000368979 RNASE10Q5GAN6 216 aaKnown RBP20.08■□□□□ 0.81
SNX3-203ENST00000368979 SHEQ5VZ18 495 aa20.08■□□□□ 0.81
SNX3-203ENST00000368979 Q6ZPA2 131 aa20.08■□□□□ 0.81
SNX3-203ENST00000368979 BPIFB2Q8N4F0 458 aa20.08■□□□□ 0.81
SNX3-203ENST00000368979 OR4K15Q8NH41 348 aa20.08■□□□□ 0.81
SNX3-203ENST00000368979 OR56B4Q8NH76 319 aa20.08■□□□□ 0.81
SNX3-203ENST00000368979 MAFIPQ8WZ33 124 aa20.08■□□□□ 0.81
SNX3-203ENST00000368979 CREB3L1Q96BA8 519 aa20.08■□□□□ 0.81
SNX3-203ENST00000368979 MARVELD1Q9BSK0 173 aa20.08■□□□□ 0.81
SNX3-203ENST00000368979 EGLN1Q9GZT9 426 aa20.08■□□□□ 0.81
SNX3-203ENST00000368979 EDARQ9UNE0 448 aa20.08■□□□□ 0.81
SNX3-203ENST00000368979 NUBP2Q9Y5Y2 271 aa20.08■□□□□ 0.81
SNX3-203ENST00000368979 NPTNQ9Y639 398 aa20.08■□□□□ 0.81
SNX3-203ENST00000368979 NAPSAO96009 420 aa20.07■□□□□ 0.8
SNX3-203ENST00000368979 AMY2BP19961 511 aa20.07■□□□□ 0.8
SNX3-203ENST00000368979 HRH1P35367 487 aa20.07■□□□□ 0.8
SNX3-203ENST00000368979 CEBPDP49716 269 aaPredicted RBP20.07■□□□□ 0.8
SNX3-203ENST00000368979 SNRPD2P62316 118 aaKnown RBP20.07■□□□□ 0.8
SNX3-203ENST00000368979 MICBQ29980 383 aa20.07■□□□□ 0.8
SNX3-203ENST00000368979 ZNF782Q6ZMW2 699 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms