RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 HPSE2Q8WWQ2 592 aa11.87□□□□□ -0.51
SHC1-202ENST00000368445 FAHD2AQ96GK7 314 aa11.87□□□□□ -0.51
SHC1-202ENST00000368445 MARS2Q96GW9 593 aaKnown RBP11.87□□□□□ -0.51
SHC1-202ENST00000368445 MTCH1Q9NZJ7 389 aa11.87□□□□□ -0.51
SHC1-202ENST00000368445 EDARQ9UNE0 448 aa11.87□□□□□ -0.51
SHC1-202ENST00000368445 CDIPTO14735 213 aa11.87□□□□□ -0.51
SHC1-202ENST00000368445 NXPH2O95156 264 aa11.87□□□□□ -0.51
SHC1-202ENST00000368445 GNG3P63215 75 aa11.87□□□□□ -0.51
SHC1-202ENST00000368445 ALKBH6Q3KRA9 238 aa11.87□□□□□ -0.51
SHC1-202ENST00000368445 CCDC28AQ8IWP9 274 aa11.87□□□□□ -0.51
SHC1-202ENST00000368445 PXT1Q8NFP0 134 aa11.87□□□□□ -0.51
SHC1-202ENST00000368445 SNIP1Q8TAD8 396 aaKnown RBP11.87□□□□□ -0.51
SHC1-202ENST00000368445 RYDENQ9NUL5 291 aaKnown RBP11.87□□□□□ -0.51
SHC1-202ENST00000368445 OSGIN2Q9Y236 505 aa11.87□□□□□ -0.51
SHC1-202ENST00000368445 ZSCAN5BA6NJL1 495 aa11.87□□□□□ -0.51
SHC1-202ENST00000368445 CDRT15L2A8MXV6 281 aa11.87□□□□□ -0.51
SHC1-202ENST00000368445 RHBDL1O75783 438 aa11.87□□□□□ -0.51
SHC1-202ENST00000368445 NXPH3O95157 252 aa11.87□□□□□ -0.51
SHC1-202ENST00000368445 OR5AC1P0C628 307 aa11.87□□□□□ -0.51
SHC1-202ENST00000368445 RPA2P15927 270 aa11.87□□□□□ -0.51
SHC1-202ENST00000368445 PTGER4P35408 488 aa11.87□□□□□ -0.51
SHC1-202ENST00000368445 PPP1CBP62140 327 aa11.87□□□□□ -0.51
SHC1-202ENST00000368445 CLEC9AQ6UXN8 241 aa11.87□□□□□ -0.51
SHC1-202ENST00000368445 TFAP2EQ6VUC0 442 aa11.87□□□□□ -0.51
SHC1-202ENST00000368445 ZNF573Q86YE8 665 aa11.87□□□□□ -0.51
SHC1-202ENST00000368445 BCL2L2Q92843 193 aaPredicted RBP11.87□□□□□ -0.51
SHC1-202ENST00000368445 MRPS24Q96EL2 167 aaKnown RBP11.87□□□□□ -0.51
SHC1-202ENST00000368445 SYT3Q9BQG1 590 aa11.87□□□□□ -0.51
SHC1-202ENST00000368445 TAS2R3Q9NYW6 316 aa11.87□□□□□ -0.51
SHC1-202ENST00000368445 TINAGQ9UJW2 476 aa11.87□□□□□ -0.51
SHC1-202ENST00000368445 HSD17B6O14756 317 aa11.86□□□□□ -0.51
SHC1-202ENST00000368445 IGHV1-2P23083 117 aa11.86□□□□□ -0.51
SHC1-202ENST00000368445 GNRHRP30968 328 aa11.86□□□□□ -0.51
SHC1-202ENST00000368445 TMEM42Q69YG0 159 aa11.86□□□□□ -0.51
SHC1-202ENST00000368445 SLC25A40Q8TBP6 338 aa11.86□□□□□ -0.51
SHC1-202ENST00000368445 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.86□□□□□ -0.51
SHC1-202ENST00000368445 LHX6Q9UPM6 363 aa11.86□□□□□ -0.51
SHC1-202ENST00000368445 RPL36A-HNRNPH2H7BZ11 118 aa11.86□□□□□ -0.51
SHC1-202ENST00000368445 DEGS1O15121 323 aa11.86□□□□□ -0.51
SHC1-202ENST00000368445 IL2RAP01589 272 aa11.86□□□□□ -0.51
SHC1-202ENST00000368445 NAT1P18440 290 aa11.86□□□□□ -0.51
SHC1-202ENST00000368445 AADACP22760 399 aa11.86□□□□□ -0.51
SHC1-202ENST00000368445 SUPT4H1P63272 117 aaKnown RBP11.86□□□□□ -0.51
SHC1-202ENST00000368445 FOXF2Q12947 444 aa11.86□□□□□ -0.51
SHC1-202ENST00000368445 ZNF660Q6AZW8 331 aaPredicted RBP11.86□□□□□ -0.51
SHC1-202ENST00000368445 MYPOPQ86VE0 399 aaPredicted RBP11.86□□□□□ -0.51
SHC1-202ENST00000368445 OR6K3Q8NGY3 331 aa11.86□□□□□ -0.51
SHC1-202ENST00000368445 TECTBQ96PL2 329 aa11.86□□□□□ -0.51
SHC1-202ENST00000368445 A0A1B0GW55 424 aa11.85□□□□□ -0.51
SHC1-202ENST00000368445 ZNF891A8MT65 544 aaPredicted RBP11.85□□□□□ -0.51
SHC1-202ENST00000368445 OR2F2O95006 317 aa11.85□□□□□ -0.51
SHC1-202ENST00000368445 SCTP09683 121 aa11.85□□□□□ -0.51
SHC1-202ENST00000368445 DUX4L2P0CJ85 424 aa11.85□□□□□ -0.51
SHC1-202ENST00000368445 DUX4L3P0CJ86 424 aa11.85□□□□□ -0.51
SHC1-202ENST00000368445 DUX4L4P0CJ87 422 aa11.85□□□□□ -0.51
SHC1-202ENST00000368445 DUX4L5P0CJ88 424 aa11.85□□□□□ -0.51
SHC1-202ENST00000368445 DUX4L6P0CJ89 424 aa11.85□□□□□ -0.51
SHC1-202ENST00000368445 DUX4L7P0CJ90 424 aa11.85□□□□□ -0.51
SHC1-202ENST00000368445 ARHGDIBP52566 201 aa11.85□□□□□ -0.51
SHC1-202ENST00000368445 OR2F1Q13607 317 aa11.85□□□□□ -0.51
SHC1-202ENST00000368445 TMEM185AQ8NFB2 350 aa11.85□□□□□ -0.51
SHC1-202ENST00000368445 MRPL24Q96A35 216 aaKnown RBP11.85□□□□□ -0.51
SHC1-202ENST00000368445 SLC5A7Q9GZV3 580 aa11.85□□□□□ -0.51
SHC1-202ENST00000368445 ZDHHC11Q9H8X9 412 aa11.85□□□□□ -0.51
SHC1-202ENST00000368445 RNF122Q9H9V4 155 aa11.85□□□□□ -0.51
SHC1-202ENST00000368445 MYOZ1Q9NP98 299 aaPredicted RBP11.85□□□□□ -0.51
SHC1-202ENST00000368445 DUX4Q9UBX2 424 aa11.85□□□□□ -0.51
SHC1-202ENST00000368445 FBXO24O75426 580 aa11.85□□□□□ -0.51
SHC1-202ENST00000368445 P2RX3P56373 397 aa11.85□□□□□ -0.51
SHC1-202ENST00000368445 PPA1Q15181 289 aa11.85□□□□□ -0.51
SHC1-202ENST00000368445 NRN1LQ496H8 165 aa11.85□□□□□ -0.51
SHC1-202ENST00000368445 PAN3Q58A45 887 aaKnown RBP11.85□□□□□ -0.51
SHC1-202ENST00000368445 FAM58AQ8N1B3 248 aa11.85□□□□□ -0.51
SHC1-202ENST00000368445 C9orf106Q8NAJ2 232 aa11.85□□□□□ -0.51
SHC1-202ENST00000368445 OR5A2Q8NGI9 324 aa11.85□□□□□ -0.51
SHC1-202ENST00000368445 OPN3Q9H1Y3 402 aaPredicted RBP11.85□□□□□ -0.51
SHC1-202ENST00000368445 SDHAF2Q9NX18 166 aa11.85□□□□□ -0.51
SHC1-202ENST00000368445 OR5AC2Q9NZP5 309 aa11.85□□□□□ -0.51
SHC1-202ENST00000368445 TNFSF18Q9UNG2 199 aa11.85□□□□□ -0.51
SHC1-202ENST00000368445 AKAP13Q12802 2813 aa11.85□□□□□ -0.51
SHC1-202ENST00000368445 TIMM8AO60220 97 aaPredicted RBP11.85□□□□□ -0.51
SHC1-202ENST00000368445 LRP3O75074 770 aa11.85□□□□□ -0.51
SHC1-202ENST00000368445 TMED6Q8WW62 240 aa11.85□□□□□ -0.51
SHC1-202ENST00000368445 C2orf50Q96LR7 162 aa11.85□□□□□ -0.51
SHC1-202ENST00000368445 LIME1Q9H400 295 aa11.85□□□□□ -0.51
SHC1-202ENST00000368445 FBXO9Q9UK97 447 aaPredicted RBP11.85□□□□□ -0.51
SHC1-202ENST00000368445 HSF4Q9ULV5 492 aa11.85□□□□□ -0.51
SHC1-202ENST00000368445 ABCA4P78363 2273 aa11.84□□□□□ -0.51
SHC1-202ENST00000368445 SNAPC5O75971 98 aa11.84□□□□□ -0.51
SHC1-202ENST00000368445 RCC1P18754 421 aaPredicted RBP11.84□□□□□ -0.51
SHC1-202ENST00000368445 AKR1C2P52895 323 aa11.84□□□□□ -0.51
SHC1-202ENST00000368445 AKR1C1Q04828 323 aa11.84□□□□□ -0.51
SHC1-202ENST00000368445 OR8G1Q15617 311 aa11.84□□□□□ -0.51
SHC1-202ENST00000368445 GLRX5Q86SX6 157 aa11.84□□□□□ -0.51
SHC1-202ENST00000368445 RBPMSQ93062 196 aaKnown RBP11.84□□□□□ -0.51
SHC1-202ENST00000368445 ARPC5LQ9BPX5 153 aa11.84□□□□□ -0.51
SHC1-202ENST00000368445 ADAT1Q9BUB4 502 aaKnown RBP11.84□□□□□ -0.51
SHC1-202ENST00000368445 MSL2Q9HCI7 577 aa11.84□□□□□ -0.51
SHC1-202ENST00000368445 RAB18Q9NP72 206 aa11.84□□□□□ -0.51
SHC1-202ENST00000368445 KIAA1549Q9HCM3 1950 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms