RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 BDH1Q02338 343 aa12.82□□□□□ -0.36
CKS1B-202ENST00000368436 BNIP1Q12981 228 aa12.82□□□□□ -0.36
CKS1B-202ENST00000368436 PDZK1IP1Q13113 114 aa12.82□□□□□ -0.36
CKS1B-202ENST00000368436 ARSJQ5FYB0 599 aaPredicted RBP12.82□□□□□ -0.36
CKS1B-202ENST00000368436 OR52W1Q6IF63 320 aa12.82□□□□□ -0.36
CKS1B-202ENST00000368436 FDX2Q6P4F2 183 aa12.82□□□□□ -0.36
CKS1B-202ENST00000368436 LHFPL2Q6ZUX7 228 aa12.82□□□□□ -0.36
CKS1B-202ENST00000368436 RTN4RL2Q86UN3 420 aa12.82□□□□□ -0.36
CKS1B-202ENST00000368436 OR2G2Q8NGZ5 317 aa12.82□□□□□ -0.36
CKS1B-202ENST00000368436 SGCDQ92629 289 aa12.82□□□□□ -0.36
CKS1B-202ENST00000368436 CORO2AQ92828 525 aa12.82□□□□□ -0.36
CKS1B-202ENST00000368436 SPSB1Q96BD6 273 aa12.82□□□□□ -0.36
CKS1B-202ENST00000368436 FGGYQ96C11 551 aa12.82□□□□□ -0.36
CKS1B-202ENST00000368436 MBOAT4Q96T53 435 aa12.82□□□□□ -0.36
CKS1B-202ENST00000368436 OSBPL10Q9BXB5 764 aa12.82□□□□□ -0.36
CKS1B-202ENST00000368436 LIN7BQ9HAP6 207 aa12.82□□□□□ -0.36
CKS1B-202ENST00000368436 FRRS1LQ9P0K9 344 aa12.82□□□□□ -0.36
CKS1B-202ENST00000368436 DPM3Q9P2X0 92 aa12.82□□□□□ -0.36
CKS1B-202ENST00000368436 IGKV1-12A0A0C4DH73 117 aa12.81□□□□□ -0.36
CKS1B-202ENST00000368436 IGKV1D-12P01611 117 aa12.81□□□□□ -0.36
CKS1B-202ENST00000368436 IGLV1-47P01700 117 aa12.81□□□□□ -0.36
CKS1B-202ENST00000368436 FCGR1AP12314 374 aa12.81□□□□□ -0.36
CKS1B-202ENST00000368436 CD34P28906 385 aa12.81□□□□□ -0.36
CKS1B-202ENST00000368436 BAIAP2L2Q6UXY1 529 aa12.81□□□□□ -0.36
CKS1B-202ENST00000368436 HEPN1Q6WQI6 88 aa12.81□□□□□ -0.36
CKS1B-202ENST00000368436 KCTD20Q7Z5Y7 419 aa12.81□□□□□ -0.36
CKS1B-202ENST00000368436 TRAPPC6BQ86SZ2 158 aa12.81□□□□□ -0.36
CKS1B-202ENST00000368436 ABHD12Q8N2K0 398 aa12.81□□□□□ -0.36
CKS1B-202ENST00000368436 OPALINQ96PE5 141 aa12.81□□□□□ -0.36
CKS1B-202ENST00000368436 COMMD4Q9H0A8 199 aa12.81□□□□□ -0.36
CKS1B-202ENST00000368436 GAL3ST2Q9H3Q3 398 aa12.81□□□□□ -0.36
CKS1B-202ENST00000368436 RIBC2Q9H4K1 309 aa12.81□□□□□ -0.36
CKS1B-202ENST00000368436 TAS2R3Q9NYW6 316 aa12.81□□□□□ -0.36
CKS1B-202ENST00000368436 TRGV10A0A0A0MS01 117 aa12.8□□□□□ -0.36
CKS1B-202ENST00000368436 FUOMA2VDF0 154 aa12.8□□□□□ -0.36
CKS1B-202ENST00000368436 J3QRE1 110 aa12.8□□□□□ -0.36
CKS1B-202ENST00000368436 SIRPB1O00241 398 aa12.8□□□□□ -0.36
CKS1B-202ENST00000368436 SH2D1BO14796 132 aa12.8□□□□□ -0.36
CKS1B-202ENST00000368436 KDM4BO94953 1096 aa12.8□□□□□ -0.36
CKS1B-202ENST00000368436 ALX3O95076 343 aa12.8□□□□□ -0.36
CKS1B-202ENST00000368436 OR2H2O95918 312 aa12.8□□□□□ -0.36
CKS1B-202ENST00000368436 MT-ND2P03891 347 aa12.8□□□□□ -0.36
CKS1B-202ENST00000368436 BRS3P32247 399 aa12.8□□□□□ -0.36
CKS1B-202ENST00000368436 SNU13P55769 128 aaKnown RBP12.8□□□□□ -0.36
CKS1B-202ENST00000368436 NANOS3P60323 173 aaKnown RBP12.8□□□□□ -0.36
CKS1B-202ENST00000368436 TCTEX1D4Q5JR98 221 aa12.8□□□□□ -0.36
CKS1B-202ENST00000368436 PRAMEF5Q5TYX0 476 aa12.8□□□□□ -0.36
CKS1B-202ENST00000368436 FOXB2Q5VYV0 432 aa12.8□□□□□ -0.36
CKS1B-202ENST00000368436 ZNF596Q8TC21 504 aa12.8□□□□□ -0.36
CKS1B-202ENST00000368436 TRUB1Q8WWH5 349 aaKnown RBP12.8□□□□□ -0.36
CKS1B-202ENST00000368436 CENPNQ96H22 339 aaPredicted RBP12.8□□□□□ -0.36
CKS1B-202ENST00000368436 AKR1E2Q96JD6 320 aa12.8□□□□□ -0.36
CKS1B-202ENST00000368436 RHOFQ9HBH0 211 aa12.8□□□□□ -0.36
CKS1B-202ENST00000368436 EXOSC4Q9NPD3 245 aaKnown RBP12.8□□□□□ -0.36
CKS1B-202ENST00000368436 OAZ3Q9UMX2 235 aa12.8□□□□□ -0.36
CKS1B-202ENST00000368436 GSTK1Q9Y2Q3 226 aa12.8□□□□□ -0.36
CKS1B-202ENST00000368436 LEUTXA8MZ59 168 aa12.79□□□□□ -0.36
CKS1B-202ENST00000368436 ZNF20P17024 532 aa12.79□□□□□ -0.36
CKS1B-202ENST00000368436 CDK2P24941 298 aa12.79□□□□□ -0.36
CKS1B-202ENST00000368436 CD24P25063 80 aa12.79□□□□□ -0.36
CKS1B-202ENST00000368436 GDNFP39905 211 aa12.79□□□□□ -0.36
CKS1B-202ENST00000368436 GLIPR1P48060 266 aa12.79□□□□□ -0.36
CKS1B-202ENST00000368436 CCR9P51686 369 aa12.79□□□□□ -0.36
CKS1B-202ENST00000368436 AESQ08117 197 aa12.79□□□□□ -0.36
CKS1B-202ENST00000368436 RNF144BQ7Z419 303 aa12.79□□□□□ -0.36
CKS1B-202ENST00000368436 CENPVQ7Z7K6 275 aaPredicted RBP12.79□□□□□ -0.36
CKS1B-202ENST00000368436 STMN2Q93045 179 aa12.79□□□□□ -0.36
CKS1B-202ENST00000368436 RBM14Q96PK6 669 aaKnown RBP12.79□□□□□ -0.36
CKS1B-202ENST00000368436 FAM53CQ9NYF3 392 aa12.79□□□□□ -0.36
CKS1B-202ENST00000368436 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.79□□□□□ -0.36
CKS1B-202ENST00000368436 HHLA2Q9UM44 414 aa12.79□□□□□ -0.36
CKS1B-202ENST00000368436 A0A087X0M5 115 aa12.78□□□□□ -0.36
CKS1B-202ENST00000368436 A0A1B0GX30 115 aa12.78□□□□□ -0.36
CKS1B-202ENST00000368436 A0A1W2PRX2 142 aa12.78□□□□□ -0.36
CKS1B-202ENST00000368436 LY6LH3BQJ8 138 aa12.78□□□□□ -0.36
CKS1B-202ENST00000368436 SLC16A6O15403 523 aa12.78□□□□□ -0.36
CKS1B-202ENST00000368436 OR2F2O95006 317 aa12.78□□□□□ -0.36
CKS1B-202ENST00000368436 AMY1AP04745 511 aa12.78□□□□□ -0.36
CKS1B-202ENST00000368436 AMY2AP04746 511 aa12.78□□□□□ -0.36
CKS1B-202ENST00000368436 CSN2P05814 226 aa12.78□□□□□ -0.36
CKS1B-202ENST00000368436 IGLL1P15814 213 aa12.78□□□□□ -0.36
CKS1B-202ENST00000368436 CD33P20138 364 aa12.78□□□□□ -0.36
CKS1B-202ENST00000368436 KPNB1Q14974 876 aaKnown RBP12.78□□□□□ -0.36
CKS1B-202ENST00000368436 SLC25A30Q5SVS4 291 aa12.78□□□□□ -0.36
CKS1B-202ENST00000368436 C1orf146Q5VVC0 180 aa12.78□□□□□ -0.36
CKS1B-202ENST00000368436 Q6P435 159 aa12.78□□□□□ -0.36
CKS1B-202ENST00000368436 SAXO1Q8IYX7 474 aa12.78□□□□□ -0.36
CKS1B-202ENST00000368436 OR10AC1Q8NH08 325 aa12.78□□□□□ -0.36
CKS1B-202ENST00000368436 RFT1Q96AA3 541 aa12.78□□□□□ -0.36
CKS1B-202ENST00000368436 CREB3L1Q96BA8 519 aa12.78□□□□□ -0.36
CKS1B-202ENST00000368436 SLC25A33Q9BSK2 321 aa12.78□□□□□ -0.36
CKS1B-202ENST00000368436 ZNF286AQ9HBT8 521 aa12.78□□□□□ -0.36
CKS1B-202ENST00000368436 TCRBV4S1A1TA0A5B7 111 aa12.77□□□□□ -0.37
CKS1B-202ENST00000368436 DAPL1A0PJW8 107 aa12.77□□□□□ -0.37
CKS1B-202ENST00000368436 ODAMA1E959 279 aa12.77□□□□□ -0.37
CKS1B-202ENST00000368436 OR4C45A6NMZ5 311 aa12.77□□□□□ -0.37
CKS1B-202ENST00000368436 E9PQ18 207 aa12.77□□□□□ -0.37
CKS1B-202ENST00000368436 BUB1B-PAK6H3BSN5 160 aa12.77□□□□□ -0.37
CKS1B-202ENST00000368436 HTR1AP08908 422 aa12.77□□□□□ -0.37
CKS1B-202ENST00000368436 PF4V1P10720 104 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms