RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.34□□□□□ -0.59
PTPRK-207ENST00000368226 PCOLCE2Q9UKZ9 415 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 QSER1Q2KHR3 1735 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 F5H697 171 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 ADAP1O75689 374 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 BGLAPP02818 100 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 MRPS11P82912 194 aaKnown RBP11.34□□□□□ -0.59
PTPRK-207ENST00000368226 NSUN5P2Q63ZY6 315 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 DHRS7BQ6IAN0 325 aaPredicted RBP11.34□□□□□ -0.59
PTPRK-207ENST00000368226 SLC25A45Q8N413 288 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 NAA60Q9H7X0 242 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 COL24A1Q17RW2 1714 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 IGKV1-8A0A0C4DH67 115 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 FGF2P09038 288 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 MOB1BQ7L9L4 216 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 TMEM208Q9BTX3 173 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 RASL12Q9NYN1 266 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 GYPAP02724 150 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 MMP7P09237 267 aaPredicted RBP11.34□□□□□ -0.59
PTPRK-207ENST00000368226 PMELP40967 661 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 SSBP1Q04837 148 aaKnown RBP11.34□□□□□ -0.59
PTPRK-207ENST00000368226 ZNF260Q3ZCT1 412 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 TPRX1Q8N7U7 411 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 ZNF441Q8N8Z8 693 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 ZBTB44Q8NCP5 570 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 OR4F17Q8NGA8 305 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 RHOFQ9HBH0 211 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 AMMECR1Q9Y4X0 333 aaPredicted RBP11.34□□□□□ -0.59
PTPRK-207ENST00000368226 HMGA2P52926 109 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 CCL8P80075 99 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 AESQ08117 197 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 IGFBP7Q16270 282 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 ETV3LQ6ZN32 361 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 ZNF680Q8NEM1 530 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 OR2J1Q9GZK6 312 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 C12orf10Q9HB07 376 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 TMEM74BQ9NUR3 256 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 CCL27Q9Y4X3 112 aa11.34□□□□□ -0.59
PTPRK-207ENST00000368226 UPK3AO75631 287 aa11.33□□□□□ -0.6
PTPRK-207ENST00000368226 SFTA3P0C7M3 94 aa11.33□□□□□ -0.6
PTPRK-207ENST00000368226 RNF165Q6ZSG1 346 aa11.33□□□□□ -0.6
PTPRK-207ENST00000368226 MTFP1Q9UDX5 166 aa11.33□□□□□ -0.6
PTPRK-207ENST00000368226 COL5A3P25940 1745 aaPredicted RBP11.33□□□□□ -0.6
PTPRK-207ENST00000368226 ADAMTS17Q8TE56 1095 aa11.33□□□□□ -0.6
PTPRK-207ENST00000368226 BCL2L2Q92843 193 aaPredicted RBP11.33□□□□□ -0.6
PTPRK-207ENST00000368226 OR5B21A6NL26 309 aa11.33□□□□□ -0.6
PTPRK-207ENST00000368226 CST2P09228 141 aa11.33□□□□□ -0.6
PTPRK-207ENST00000368226 FOSL1P15407 271 aa11.33□□□□□ -0.6
PTPRK-207ENST00000368226 POLR2GP62487 172 aaKnown RBP eCLIP11.33□□□□□ -0.6
PTPRK-207ENST00000368226 ZNF574Q6ZN55 896 aaPredicted RBP11.33□□□□□ -0.6
PTPRK-207ENST00000368226 SF3B5Q9BWJ5 86 aaKnown RBP11.33□□□□□ -0.6
PTPRK-207ENST00000368226 GLRX2Q9NS18 164 aa11.33□□□□□ -0.6
PTPRK-207ENST00000368226 TMEM38BQ9NVV0 291 aa11.33□□□□□ -0.6
PTPRK-207ENST00000368226 TRAPPC4Q9Y296 219 aa11.33□□□□□ -0.6
PTPRK-207ENST00000368226 ZNF770Q6IQ21 691 aaPredicted RBP11.33□□□□□ -0.6
PTPRK-207ENST00000368226 DEGS2Q6QHC5 323 aa11.33□□□□□ -0.6
PTPRK-207ENST00000368226 HDHD3Q9BSH5 251 aaPredicted RBP11.33□□□□□ -0.6
PTPRK-207ENST00000368226 ZDHHC11Q9H8X9 412 aa11.33□□□□□ -0.6
PTPRK-207ENST00000368226 MPC1Q9Y5U8 109 aa11.33□□□□□ -0.6
PTPRK-207ENST00000368226 CASP8AP2Q9UKL3 1982 aa11.33□□□□□ -0.6
PTPRK-207ENST00000368226 IGHV1-45A0A0A0MS14 117 aa11.32□□□□□ -0.6
PTPRK-207ENST00000368226 C16orf97H3BN30 126 aa11.32□□□□□ -0.6
PTPRK-207ENST00000368226 FGF9P31371 208 aaPredicted RBP11.32□□□□□ -0.6
PTPRK-207ENST00000368226 SIGLECL1Q8N7X8 197 aa11.32□□□□□ -0.6
PTPRK-207ENST00000368226 ABHD1Q96SE0 405 aa11.32□□□□□ -0.6
PTPRK-207ENST00000368226 RSRP1Q9BUV0 290 aa11.32□□□□□ -0.6
PTPRK-207ENST00000368226 OR6C3Q9NZP0 311 aa11.32□□□□□ -0.6
PTPRK-207ENST00000368226 MARF1Q9Y4F3 1742 aaKnown RBP11.32□□□□□ -0.6
PTPRK-207ENST00000368226 CD300LDQ6UXZ3 194 aa11.32□□□□□ -0.6
PTPRK-207ENST00000368226 MYPOPQ86VE0 399 aaPredicted RBP11.32□□□□□ -0.6
PTPRK-207ENST00000368226 DPF1Q92782 380 aa11.32□□□□□ -0.6
PTPRK-207ENST00000368226 GPA33Q99795 319 aa11.32□□□□□ -0.6
PTPRK-207ENST00000368226 RNF7Q9UBF6 113 aa11.32□□□□□ -0.6
PTPRK-207ENST00000368226 TRIM77I1YAP6 450 aa11.32□□□□□ -0.6
PTPRK-207ENST00000368226 C19orf57Q0VDD7 668 aa11.32□□□□□ -0.6
PTPRK-207ENST00000368226 WFDC3Q8IUB2 231 aa11.32□□□□□ -0.6
PTPRK-207ENST00000368226 RFLNBQ8N5W9 214 aa11.32□□□□□ -0.6
PTPRK-207ENST00000368226 KRTDAPP60985 99 aa11.32□□□□□ -0.6
PTPRK-207ENST00000368226 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.32□□□□□ -0.6
PTPRK-207ENST00000368226 ZDHHC22Q8N966 263 aa11.32□□□□□ -0.6
PTPRK-207ENST00000368226 R3HDM4Q96D70 268 aa11.32□□□□□ -0.6
PTPRK-207ENST00000368226 MS4A3Q96HJ5 214 aa11.32□□□□□ -0.6
PTPRK-207ENST00000368226 SP9P0CG40 484 aa11.32□□□□□ -0.6
PTPRK-207ENST00000368226 SLC24A4Q8NFF2 622 aa11.32□□□□□ -0.6
PTPRK-207ENST00000368226 FGF11Q92914 225 aa11.32□□□□□ -0.6
PTPRK-207ENST00000368226 NXF2Q9GZY0 626 aaKnown RBP11.32□□□□□ -0.6
PTPRK-207ENST00000368226 SEBOXQ9HB31 216 aaPredicted RBP11.32□□□□□ -0.6
PTPRK-207ENST00000368226 KLHDC2Q9Y2U9 406 aa11.32□□□□□ -0.6
PTPRK-207ENST00000368226 PCMT1P22061 227 aa11.31□□□□□ -0.6
PTPRK-207ENST00000368226 CEACAM3P40198 252 aa11.31□□□□□ -0.6
PTPRK-207ENST00000368226 KCNJ3P48549 501 aa11.31□□□□□ -0.6
PTPRK-207ENST00000368226 NAAAQ02083 359 aa11.31□□□□□ -0.6
PTPRK-207ENST00000368226 ECSCRQ19T08 205 aa11.31□□□□□ -0.6
PTPRK-207ENST00000368226 GAPTQ8N292 157 aa11.31□□□□□ -0.6
PTPRK-207ENST00000368226 CCL28Q9NRJ3 127 aa11.31□□□□□ -0.6
PTPRK-207ENST00000368226 DLEC1Q9Y238 1755 aa11.31□□□□□ -0.6
PTPRK-207ENST00000368226 A0A0J9YW62 118 aa11.31□□□□□ -0.6
PTPRK-207ENST00000368226 CDC20Q12834 499 aa11.31□□□□□ -0.6
PTPRK-207ENST00000368226 ZNF429Q86V71 674 aa11.31□□□□□ -0.6
PTPRK-207ENST00000368226 SLC52A3Q9NQ40 469 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms