RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 MGST3O14880 152 aa11.27□□□□□ -0.61
VAMP4-202ENST00000367740 LYNP07948 512 aa11.27□□□□□ -0.61
VAMP4-202ENST00000367740 OR8U9P0C7N5 309 aa11.27□□□□□ -0.61
VAMP4-202ENST00000367740 ARSBP15848 533 aa11.27□□□□□ -0.61
VAMP4-202ENST00000367740 VDAC1P21796 283 aa11.27□□□□□ -0.61
VAMP4-202ENST00000367740 GSTT1P30711 240 aa11.27□□□□□ -0.61
VAMP4-202ENST00000367740 ZNF91Q05481 1191 aa11.27□□□□□ -0.61
VAMP4-202ENST00000367740 CROCCP2Q86T23 111 aa11.27□□□□□ -0.61
VAMP4-202ENST00000367740 Q8N6K4 173 aa11.27□□□□□ -0.61
VAMP4-202ENST00000367740 OR51E1Q8TCB6 317 aa11.27□□□□□ -0.61
VAMP4-202ENST00000367740 CORO2AQ92828 525 aa11.27□□□□□ -0.61
VAMP4-202ENST00000367740 CEP19Q96LK0 163 aa11.27□□□□□ -0.61
VAMP4-202ENST00000367740 KCTD7Q96MP8 289 aa11.27□□□□□ -0.61
VAMP4-202ENST00000367740 ALX4Q9H161 411 aaPredicted RBP11.27□□□□□ -0.61
VAMP4-202ENST00000367740 TAS2R3Q9NYW6 316 aa11.27□□□□□ -0.61
VAMP4-202ENST00000367740 VSIG4Q9Y279 399 aa11.27□□□□□ -0.61
VAMP4-202ENST00000367740 KLHDC2Q9Y2U9 406 aa11.27□□□□□ -0.61
VAMP4-202ENST00000367740 AMMECR1Q9Y4X0 333 aaPredicted RBP11.27□□□□□ -0.61
VAMP4-202ENST00000367740 NCBP2LA6PVI3 153 aaKnown RBP11.26□□□□□ -0.61
VAMP4-202ENST00000367740 C12orf77C9JDV5 145 aa11.26□□□□□ -0.61
VAMP4-202ENST00000367740 GSC2O15499 205 aa11.26□□□□□ -0.61
VAMP4-202ENST00000367740 DEDDO75618 318 aa11.26□□□□□ -0.61
VAMP4-202ENST00000367740 GADD45GO95257 159 aa11.26□□□□□ -0.61
VAMP4-202ENST00000367740 KIR3DL2P43630 455 aa11.26□□□□□ -0.61
VAMP4-202ENST00000367740 LIPEQ05469 1076 aa11.26□□□□□ -0.61
VAMP4-202ENST00000367740 KLF10Q13118 480 aa11.26□□□□□ -0.61
VAMP4-202ENST00000367740 EBI3Q14213 229 aa11.26□□□□□ -0.61
VAMP4-202ENST00000367740 CLVS2Q5SYC1 327 aa11.26□□□□□ -0.61
VAMP4-202ENST00000367740 SLX4IPQ5VYV7 408 aa11.26□□□□□ -0.61
VAMP4-202ENST00000367740 RPL13AP3Q6NVV1 102 aa11.26□□□□□ -0.61
VAMP4-202ENST00000367740 OR8H3Q8N146 312 aa11.26□□□□□ -0.61
VAMP4-202ENST00000367740 OR9G1Q8NH87 305 aa11.26□□□□□ -0.61
VAMP4-202ENST00000367740 OTOSQ8NHW6 89 aa11.26□□□□□ -0.61
VAMP4-202ENST00000367740 GNPDA2Q8TDQ7 276 aa11.26□□□□□ -0.61
VAMP4-202ENST00000367740 THEM6Q8WUY1 208 aa11.26□□□□□ -0.61
VAMP4-202ENST00000367740 FAM162AQ96A26 154 aa11.26□□□□□ -0.61
VAMP4-202ENST00000367740 SLAMF9Q96A28 289 aa11.26□□□□□ -0.61
VAMP4-202ENST00000367740 TLCD1Q96CP7 247 aa11.26□□□□□ -0.61
VAMP4-202ENST00000367740 TEAD3Q99594 435 aa11.26□□□□□ -0.61
VAMP4-202ENST00000367740 ST6GALNAC5Q9BVH7 336 aa11.26□□□□□ -0.61
VAMP4-202ENST00000367740 OR51J1Q9H342 316 aa11.26□□□□□ -0.61
VAMP4-202ENST00000367740 MED20Q9H944 212 aa11.26□□□□□ -0.61
VAMP4-202ENST00000367740 SEBOXQ9HB31 216 aaPredicted RBP11.26□□□□□ -0.61
VAMP4-202ENST00000367740 FAM206AQ9NX38 181 aa11.26□□□□□ -0.61
VAMP4-202ENST00000367740 TAS2R1Q9NYW7 299 aa11.26□□□□□ -0.61
VAMP4-202ENST00000367740 DNAH6Q9C0G6 4158 aa11.25□□□□□ -0.61
VAMP4-202ENST00000367740 FAT2Q9NYQ8 4349 aa11.25□□□□□ -0.61
VAMP4-202ENST00000367740 GSTA4O15217 222 aa11.25□□□□□ -0.61
VAMP4-202ENST00000367740 DHRS3O75911 302 aa11.25□□□□□ -0.61
VAMP4-202ENST00000367740 INMTO95050 263 aa11.25□□□□□ -0.61
VAMP4-202ENST00000367740 NCK1P16333 377 aa11.25□□□□□ -0.61
VAMP4-202ENST00000367740 FSTP19883 344 aa11.25□□□□□ -0.61
VAMP4-202ENST00000367740 PTGFRP43088 359 aa11.25□□□□□ -0.61
VAMP4-202ENST00000367740 RAB7AP51149 207 aa11.25□□□□□ -0.61
VAMP4-202ENST00000367740 KPNB1Q14974 876 aaKnown RBP11.25□□□□□ -0.61
VAMP4-202ENST00000367740 LCE2CQ5TA81 110 aa11.25□□□□□ -0.61
VAMP4-202ENST00000367740 OR4D6Q8NGJ1 314 aa11.25□□□□□ -0.61
VAMP4-202ENST00000367740 EAF1Q96JC9 268 aaPredicted RBP11.25□□□□□ -0.61
VAMP4-202ENST00000367740 CADM1Q9BY67 442 aaKnown RBP11.25□□□□□ -0.61
VAMP4-202ENST00000367740 PARD6BQ9BYG5 372 aa11.25□□□□□ -0.61
VAMP4-202ENST00000367740 GID8Q9NWU2 228 aa11.25□□□□□ -0.61
VAMP4-202ENST00000367740 IL20Q9NYY1 176 aa11.25□□□□□ -0.61
VAMP4-202ENST00000367740 ZNF580Q9UK33 172 aa11.25□□□□□ -0.61
VAMP4-202ENST00000367740 FAM183AA6NL82 134 aa11.24□□□□□ -0.61
VAMP4-202ENST00000367740 DLGAP1O14490 977 aa11.24□□□□□ -0.61
VAMP4-202ENST00000367740 SELENOFO60613 162 aa11.24□□□□□ -0.61
VAMP4-202ENST00000367740 IGLV1-51P01701 117 aa11.24□□□□□ -0.61
VAMP4-202ENST00000367740 IGHV3-7P01780 117 aa11.24□□□□□ -0.61
VAMP4-202ENST00000367740 IGF1P05019 195 aa11.24□□□□□ -0.61
VAMP4-202ENST00000367740 DUSP1P28562 367 aa11.24□□□□□ -0.61
VAMP4-202ENST00000367740 IFNGR2P38484 337 aa11.24□□□□□ -0.61
VAMP4-202ENST00000367740 GLIPR1P48060 266 aa11.24□□□□□ -0.61
VAMP4-202ENST00000367740 NUDT2P50583 147 aa11.24□□□□□ -0.61
VAMP4-202ENST00000367740 ZP1P60852 638 aa11.24□□□□□ -0.61
VAMP4-202ENST00000367740 MADCAM1Q13477 382 aa11.24□□□□□ -0.61
VAMP4-202ENST00000367740 C17orf58Q2M2W7 97 aa11.24□□□□□ -0.61
VAMP4-202ENST00000367740 SLC15A3Q8IY34 581 aa11.24□□□□□ -0.61
VAMP4-202ENST00000367740 EMG1Q92979 244 aaKnown RBP11.24□□□□□ -0.61
VAMP4-202ENST00000367740 KIRREL1Q96J84 757 aa11.24□□□□□ -0.61
VAMP4-202ENST00000367740 OR4C12Q96R67 309 aa11.24□□□□□ -0.61
VAMP4-202ENST00000367740 ACTR3BQ9P1U1 418 aa11.24□□□□□ -0.61
VAMP4-202ENST00000367740 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.24□□□□□ -0.61
VAMP4-202ENST00000367740 LINC01619G3V211 115 aa11.23□□□□□ -0.61
VAMP4-202ENST00000367740 J3QR06 171 aa11.23□□□□□ -0.61
VAMP4-202ENST00000367740 NME4O00746 187 aa11.23□□□□□ -0.61
VAMP4-202ENST00000367740 MPZL2O60487 215 aa11.23□□□□□ -0.61
VAMP4-202ENST00000367740 BRI3O95415 125 aa11.23□□□□□ -0.61
VAMP4-202ENST00000367740 H2AFXP16104 143 aaPredicted RBP11.23□□□□□ -0.61
VAMP4-202ENST00000367740 NFYBP25208 207 aa11.23□□□□□ -0.61
VAMP4-202ENST00000367740 PPIFP30405 207 aaKnown RBP11.23□□□□□ -0.61
VAMP4-202ENST00000367740 SMIM11AP58511 58 aa11.23□□□□□ -0.61
VAMP4-202ENST00000367740 PITPNAQ00169 270 aa11.23□□□□□ -0.61
VAMP4-202ENST00000367740 TMEM65Q6PI78 240 aa11.23□□□□□ -0.61
VAMP4-202ENST00000367740 IZUMO1Q8IYV9 350 aa11.23□□□□□ -0.61
VAMP4-202ENST00000367740 PGAM4Q8N0Y7 254 aa11.23□□□□□ -0.61
VAMP4-202ENST00000367740 RP9Q8TA86 221 aaKnown RBP11.23□□□□□ -0.61
VAMP4-202ENST00000367740 LEAP2Q969E1 77 aa11.23□□□□□ -0.61
VAMP4-202ENST00000367740 PBOV1Q9GZY1 135 aa11.23□□□□□ -0.61
VAMP4-202ENST00000367740 PLSCR3Q9NRY6 295 aa11.23□□□□□ -0.61
VAMP4-202ENST00000367740 GLS2Q9UI32 602 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms