RNA–Protein interactions for RNA: ENST00000366872.9

CAPN8-201, Transcript of calpain 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN8, Length 2,427 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-201ENST00000366872 C3orf85A0A1B0GTC6 90 aa11.07□□□□□ -0.64
CAPN8-201ENST00000366872 FAM230AA0A1W2PPH8 454 aa11.07□□□□□ -0.64
CAPN8-201ENST00000366872 SRP19P09132 144 aaKnown RBP11.07□□□□□ -0.64
CAPN8-201ENST00000366872 TCN2P20062 427 aa11.07□□□□□ -0.64
CAPN8-201ENST00000366872 KLK2P20151 261 aa11.07□□□□□ -0.64
CAPN8-201ENST00000366872 PPP1CCP36873 323 aaKnown RBP11.07□□□□□ -0.64
CAPN8-201ENST00000366872 RBM11P57052 281 aaKnown RBP11.07□□□□□ -0.64
CAPN8-201ENST00000366872 MALLQ13021 153 aa11.07□□□□□ -0.64
CAPN8-201ENST00000366872 RNPS1Q15287 305 aaKnown RBP11.07□□□□□ -0.64
CAPN8-201ENST00000366872 SP6Q3SY56 376 aa11.07□□□□□ -0.64
CAPN8-201ENST00000366872 FAM209BQ5JX69 171 aa11.07□□□□□ -0.64
CAPN8-201ENST00000366872 SLC35E3Q7Z769 313 aa11.07□□□□□ -0.64
CAPN8-201ENST00000366872 WDR5BQ86VZ2 330 aa11.07□□□□□ -0.64
CAPN8-201ENST00000366872 SLC35G3Q8N808 338 aa11.07□□□□□ -0.64
CAPN8-201ENST00000366872 ZNF385AQ96PM9 386 aaKnown RBP11.07□□□□□ -0.64
CAPN8-201ENST00000366872 TNRC6AQ8NDV7 1962 aaKnown RBP11.07□□□□□ -0.64
CAPN8-201ENST00000366872 hCG_38984A0A1B0GV85 526 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 A0A1W2PPE2 198 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 XRCC2O43543 280 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 F10P00742 488 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 NRASP01111 189 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 PPYP01298 95 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 SLC25A6P12236 298 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 LIFP15018 202 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 FUT3P21217 361 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 ATP6V0CP27449 155 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 OPRM1P35372 400 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 NKX2-1P43699 371 aaPredicted RBP11.06□□□□□ -0.64
CAPN8-201ENST00000366872 FHITP49789 147 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 RRADP55042 308 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 RAB2AP61019 212 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 RAC1P63000 192 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 ADAM5Q6NVV9 412 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 ZNF574Q6ZN55 896 aaPredicted RBP11.06□□□□□ -0.64
CAPN8-201ENST00000366872 TMEM182Q6ZP80 229 aaPredicted RBP11.06□□□□□ -0.64
CAPN8-201ENST00000366872 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.06□□□□□ -0.64
CAPN8-201ENST00000366872 SAXO1Q8IYX7 474 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 DEFB119Q8N690 84 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 FAM213BQ8TBF2 198 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 CD300LFQ8TDQ1 290 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 SPSB4Q96A44 273 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 PAPOLGQ9BWT3 736 aaKnown RBP11.06□□□□□ -0.64
CAPN8-201ENST00000366872 TOLLIPQ9H0E2 274 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 OPA3Q9H6K4 179 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 FBXO7Q9Y3I1 522 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 ZNF729A6NN14 1252 aaPredicted RBP11.06□□□□□ -0.64
CAPN8-201ENST00000366872 RPL36A-HNRNPH2H7BZ11 118 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 PHF1O43189 567 aaPredicted RBP11.06□□□□□ -0.64
CAPN8-201ENST00000366872 NQO2P16083 231 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 ID3Q02535 119 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 AKIRIN2Q53H80 203 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 KHDC3LQ587J8 217 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 HSD17B11Q8NBQ5 300 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 OR2G3Q8NGZ4 309 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 RBM24Q9BX46 236 aaKnown RBP11.06□□□□□ -0.64
CAPN8-201ENST00000366872 TMEM38BQ9NVV0 291 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 TMEM242Q9NWH2 141 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 SLC7A11Q9UPY5 501 aa11.06□□□□□ -0.64
CAPN8-201ENST00000366872 IGKV1-12A0A0C4DH73 117 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 HSD17B6O14756 317 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 GEMIN2O14893 280 aaKnown RBP11.05□□□□□ -0.64
CAPN8-201ENST00000366872 ZIC3O60481 467 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 TIAF1O95411 115 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 IGKV1D-12P01611 117 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 OPN1LWP04000 364 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 DBHP09172 617 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 CBR1P16152 277 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 AADACP22760 399 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 CLDN15P56746 228 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 FOXL2P58012 376 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 PCOLCEQ15113 449 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 NRN1LQ496H8 165 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 RIPPLY2Q5TAB7 128 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 DPPA2Q7Z7J5 298 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 OR5L1Q8NGL2 311 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 EDARADDQ8WWZ3 215 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 GTF3AQ92664 365 aaKnown RBP11.05□□□□□ -0.64
CAPN8-201ENST00000366872 OR6C1Q96RD1 312 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 TP53RKQ96S44 253 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 PARP12Q9H0J9 701 aaKnown RBP11.05□□□□□ -0.64
CAPN8-201ENST00000366872 SHANK1Q9Y566 2161 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 GON4LQ3T8J9 2241 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 IGSF23A1L1A6 192 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 SPRY1O43609 319 aaPredicted RBP11.05□□□□□ -0.64
CAPN8-201ENST00000366872 ANGPTL7O43827 346 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 NDUFS6O75380 124 aaKnown RBP11.05□□□□□ -0.64
CAPN8-201ENST00000366872 C1QL1O75973 258 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 ARG1P05089 322 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 CTXN2P0C2S0 81 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 UCP1P25874 307 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 PCBD1P61457 104 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 IL24Q13007 206 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 PHLDA2Q53GA4 152 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 NMSQ5H8A3 153 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 SELENOHQ8IZQ5 122 aaKnown RBP11.05□□□□□ -0.64
CAPN8-201ENST00000366872 TMEM252Q8N6L7 170 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 PARPBPQ9NWS1 579 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 TREM2Q9NZC2 230 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 ST3GAL6Q9Y274 331 aa11.05□□□□□ -0.64
CAPN8-201ENST00000366872 ELOA3CA0A087WX78 387 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms