RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 OXA1LQ15070 435 aa17.87■□□□□ 0.45
CDC42BPB-201ENST00000361246 SCARB1Q8WTV0 552 aa17.87■□□□□ 0.45
CDC42BPB-201ENST00000361246 PRSS50Q9UI38 385 aa17.87■□□□□ 0.45
CDC42BPB-201ENST00000361246 LIPT2A6NK58 231 aa17.87■□□□□ 0.45
CDC42BPB-201ENST00000361246 CD40P25942 277 aa17.87■□□□□ 0.45
CDC42BPB-201ENST00000361246 CCL13Q99616 98 aa17.87■□□□□ 0.45
CDC42BPB-201ENST00000361246 CDCA4Q9BXL8 241 aa17.87■□□□□ 0.45
CDC42BPB-201ENST00000361246 GLRX2Q9NS18 164 aa17.87■□□□□ 0.45
CDC42BPB-201ENST00000361246 MBP02144 154 aa17.87■□□□□ 0.45
CDC42BPB-201ENST00000361246 BRWD1Q9NSI6 2320 aa17.86■□□□□ 0.45
CDC42BPB-201ENST00000361246 HIST1H1DP16402 221 aaKnown RBP17.86■□□□□ 0.45
CDC42BPB-201ENST00000361246 NCR3LG1Q68D85 454 aa17.86■□□□□ 0.45
CDC42BPB-201ENST00000361246 CISD1Q9NZ45 108 aaKnown RBP17.86■□□□□ 0.45
CDC42BPB-201ENST00000361246 HOXA4Q00056 320 aaPredicted RBP17.86■□□□□ 0.45
CDC42BPB-201ENST00000361246 CDC20Q12834 499 aa17.86■□□□□ 0.45
CDC42BPB-201ENST00000361246 TMEM88Q6PEY1 159 aa17.86■□□□□ 0.45
CDC42BPB-201ENST00000361246 DGAT2L6Q6ZPD8 337 aa17.86■□□□□ 0.45
CDC42BPB-201ENST00000361246 ATP5J2P56134 94 aa17.86■□□□□ 0.45
CDC42BPB-201ENST00000361246 ANKRD34CP0C6C1 535 aa17.86■□□□□ 0.45
CDC42BPB-201ENST00000361246 SLC38A11Q08AI6 406 aa17.86■□□□□ 0.45
CDC42BPB-201ENST00000361246 MESTQ5EB52 335 aa17.86■□□□□ 0.45
CDC42BPB-201ENST00000361246 ZNF385AQ96PM9 386 aaKnown RBP17.86■□□□□ 0.45
CDC42BPB-201ENST00000361246 THYN1Q9P016 225 aa17.86■□□□□ 0.45
CDC42BPB-201ENST00000361246 SLC17A2O00624 439 aa17.85■□□□□ 0.45
CDC42BPB-201ENST00000361246 LOXL3P58215 753 aa17.85■□□□□ 0.45
CDC42BPB-201ENST00000361246 TMEM229BQ8NBD8 167 aa17.85■□□□□ 0.45
CDC42BPB-201ENST00000361246 OR2H1Q9GZK4 316 aa17.85■□□□□ 0.45
CDC42BPB-201ENST00000361246 ZFPL1O95159 310 aa17.85■□□□□ 0.45
CDC42BPB-201ENST00000361246 SPNP16150 400 aa17.85■□□□□ 0.45
CDC42BPB-201ENST00000361246 PNLIPRP3Q17RR3 467 aa17.85■□□□□ 0.45
CDC42BPB-201ENST00000361246 ETFRF1Q6IPR1 90 aa17.85■□□□□ 0.45
CDC42BPB-201ENST00000361246 MYPOPQ86VE0 399 aaPredicted RBP17.85■□□□□ 0.45
CDC42BPB-201ENST00000361246 C10orf90Q96M02 699 aa17.85■□□□□ 0.45
CDC42BPB-201ENST00000361246 BAK1Q16611 211 aa17.85■□□□□ 0.45
CDC42BPB-201ENST00000361246 FAHD1Q6P587 224 aa17.85■□□□□ 0.45
CDC42BPB-201ENST00000361246 NUBPLQ8TB37 319 aa17.85■□□□□ 0.45
CDC42BPB-201ENST00000361246 IGHV1-45A0A0A0MS14 117 aa17.85■□□□□ 0.45
CDC42BPB-201ENST00000361246 CD160O95971 181 aa17.85■□□□□ 0.45
CDC42BPB-201ENST00000361246 SMIM18P0DKX4 95 aa17.85■□□□□ 0.45
CDC42BPB-201ENST00000361246 CDCP2Q5VXM1 449 aa17.85■□□□□ 0.45
CDC42BPB-201ENST00000361246 NTN4Q9HB63 628 aa17.85■□□□□ 0.45
CDC42BPB-201ENST00000361246 GAR1Q9NY12 217 aaKnown RBP17.85■□□□□ 0.45
CDC42BPB-201ENST00000361246 MYOFQ9NZM1 2061 aa17.85■□□□□ 0.45
CDC42BPB-201ENST00000361246 LAMB2P55268 1798 aa17.85■□□□□ 0.45
CDC42BPB-201ENST00000361246 PMCHP20382 165 aa17.85■□□□□ 0.45
CDC42BPB-201ENST00000361246 CD200P41217 278 aa17.85■□□□□ 0.45
CDC42BPB-201ENST00000361246 TIAL1Q01085 375 aaKnown RBP eCLIP17.85■□□□□ 0.45
CDC42BPB-201ENST00000361246 OR6X1Q8NH79 312 aa17.85■□□□□ 0.45
CDC42BPB-201ENST00000361246 SRRQ9GZT4 340 aa17.85■□□□□ 0.45
CDC42BPB-201ENST00000361246 GIPP09681 153 aaPredicted RBP17.84■□□□□ 0.45
CDC42BPB-201ENST00000361246 FABP4P15090 132 aa17.84■□□□□ 0.45
CDC42BPB-201ENST00000361246 NHLRC1Q6VVB1 395 aa17.84■□□□□ 0.45
CDC42BPB-201ENST00000361246 NUP37Q8NFH4 326 aa17.84■□□□□ 0.45
CDC42BPB-201ENST00000361246 GPR27Q9NS67 375 aa17.84■□□□□ 0.45
CDC42BPB-201ENST00000361246 TMEFF2Q9UIK5 374 aaPredicted RBP17.84■□□□□ 0.45
CDC42BPB-201ENST00000361246 EVX1P49640 407 aa17.84■□□□□ 0.45
CDC42BPB-201ENST00000361246 RNF151Q2KHN1 245 aa17.84■□□□□ 0.45
CDC42BPB-201ENST00000361246 HGDQ93099 445 aa17.84■□□□□ 0.45
CDC42BPB-201ENST00000361246 FGF20Q9NP95 211 aaPredicted RBP17.84■□□□□ 0.45
CDC42BPB-201ENST00000361246 NUFIP2Q7Z417 695 aaKnown RBP17.84■□□□□ 0.45
CDC42BPB-201ENST00000361246 SLC25A45Q8N413 288 aa17.84■□□□□ 0.45
CDC42BPB-201ENST00000361246 GON7Q9BXV9 100 aa17.84■□□□□ 0.45
CDC42BPB-201ENST00000361246 PILRBQ9UKJ0 227 aa17.84■□□□□ 0.45
CDC42BPB-201ENST00000361246 FAM24AA6NFZ4 105 aa17.84■□□□□ 0.45
CDC42BPB-201ENST00000361246 CEBPDP49716 269 aaPredicted RBP17.84■□□□□ 0.45
CDC42BPB-201ENST00000361246 MMDQ15546 238 aa17.84■□□□□ 0.45
CDC42BPB-201ENST00000361246 ASB5Q8WWX0 329 aa17.84■□□□□ 0.45
CDC42BPB-201ENST00000361246 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.84■□□□□ 0.45
CDC42BPB-201ENST00000361246 PIKFYVEQ9Y2I7 2098 aa17.84■□□□□ 0.45
CDC42BPB-201ENST00000361246 NQO2P16083 231 aa17.84■□□□□ 0.45
CDC42BPB-201ENST00000361246 MDH2P40926 338 aaKnown RBP17.84■□□□□ 0.45
CDC42BPB-201ENST00000361246 TBC1D26Q86UD7 250 aa17.84■□□□□ 0.45
CDC42BPB-201ENST00000361246 ITPKCQ96DU7 683 aa17.84■□□□□ 0.45
CDC42BPB-201ENST00000361246 RNF2Q99496 336 aa17.84■□□□□ 0.45
CDC42BPB-201ENST00000361246 FOXJ2Q9P0K8 574 aa17.84■□□□□ 0.45
CDC42BPB-201ENST00000361246 CYB5R3P00387 301 aaPredicted RBP17.83■□□□□ 0.45
CDC42BPB-201ENST00000361246 PSG6Q00889 435 aa17.83■□□□□ 0.45
CDC42BPB-201ENST00000361246 OOEPA6NGQ2 149 aa17.83■□□□□ 0.45
CDC42BPB-201ENST00000361246 NEURL1O76050 574 aa17.83■□□□□ 0.45
CDC42BPB-201ENST00000361246 IGHA1P01876 353 aa17.83■□□□□ 0.45
CDC42BPB-201ENST00000361246 IGHA2P01877 340 aa17.83■□□□□ 0.45
CDC42BPB-201ENST00000361246 PMELP40967 661 aa17.83■□□□□ 0.45
CDC42BPB-201ENST00000361246 ZNF141Q15928 474 aa17.83■□□□□ 0.45
CDC42BPB-201ENST00000361246 FA2HQ7L5A8 372 aa17.83■□□□□ 0.45
CDC42BPB-201ENST00000361246 R3HDM4Q96D70 268 aa17.83■□□□□ 0.45
CDC42BPB-201ENST00000361246 MED30Q96HR3 178 aa17.83■□□□□ 0.45
CDC42BPB-201ENST00000361246 ZNF275Q9NSD4 429 aaPredicted RBP17.83■□□□□ 0.45
CDC42BPB-201ENST00000361246 UQCC1Q9NVA1 299 aa17.83■□□□□ 0.45
CDC42BPB-201ENST00000361246 FKBP11Q9NYL4 201 aa17.83■□□□□ 0.45
CDC42BPB-201ENST00000361246 ACP1P24666 158 aa17.83■□□□□ 0.45
CDC42BPB-201ENST00000361246 SLC25A1P53007 311 aa17.83■□□□□ 0.45
CDC42BPB-201ENST00000361246 PF4V1P10720 104 aa17.83■□□□□ 0.44
CDC42BPB-201ENST00000361246 RNASEKQ6P5S7 137 aaKnown RBP17.83■□□□□ 0.44
CDC42BPB-201ENST00000361246 CYSLTR2Q9NS75 346 aa17.83■□□□□ 0.44
CDC42BPB-201ENST00000361246 SSMEM1Q8WWF3 244 aa17.83■□□□□ 0.44
CDC42BPB-201ENST00000361246 LFNGQ8NES3 379 aa17.83■□□□□ 0.44
CDC42BPB-201ENST00000361246 GMPPAQ96IJ6 420 aaPredicted RBP17.83■□□□□ 0.44
CDC42BPB-201ENST00000361246 NKX6-2Q9C056 277 aaPredicted RBP17.83■□□□□ 0.44
CDC42BPB-201ENST00000361246 VSIG4Q9Y279 399 aa17.83■□□□□ 0.44
CDC42BPB-201ENST00000361246 PDZK1IP1Q13113 114 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms