RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 PIK3IP1Q96FE7 263 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 ULBP2Q9BZM5 246 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 CSAG2Q9Y5P2 127 aa6.31□□□□□ -1.4
CLCN3-202ENST00000360642 LOC400499M0QZD8 3231 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 C13orf42A0A1B0GVH6 325 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 A0A1B0GW55 424 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 GJE1A6NN92 205 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 KCNAB3O43448 404 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 DUX4L2P0CJ85 424 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 DUX4L3P0CJ86 424 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 DUX4L4P0CJ87 422 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 DUX4L5P0CJ88 424 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 DUX4L6P0CJ89 424 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 DUX4L7P0CJ90 424 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 SELLP14151 372 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 PGAM2P15259 253 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 SERPINA2P20848 420 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 SRD5A2P31213 254 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 STARP49675 285 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 DUSP3P51452 185 aaPredicted RBP6.3□□□□□ -1.4
CLCN3-202ENST00000360642 PPIAP62937 165 aaKnown RBP6.3□□□□□ -1.4
CLCN3-202ENST00000360642 SURF2Q15527 256 aaPredicted RBP6.3□□□□□ -1.4
CLCN3-202ENST00000360642 ANKRD55Q3KP44 614 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 PXDC1Q5TGL8 231 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 GGNQ86UU5 652 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 TMEM17Q86X19 198 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 GPR137CQ8N3F9 429 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 RRNAD1Q96FB5 475 aaKnown RBP6.3□□□□□ -1.4
CLCN3-202ENST00000360642 LOXL4Q96JB6 756 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 CYTL1Q9NRR1 136 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 PLEK2Q9NYT0 353 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 DUX4Q9UBX2 424 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 IGKV1D-8A0A087WSZ0 117 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 A0A0G2JMM0 328 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 A0A1W2PPB8 328 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 A0A1W2PRS3 328 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 ZNF716A6NP11 495 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 MPTX1A8MV57 137 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 KIR3DP1A8MWS1 328 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 TEX22C9J3V5 150 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 SDCBPO00560 298 aaPredicted RBP6.3□□□□□ -1.4
CLCN3-202ENST00000360642 SIGLEC5O15389 551 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 RRP8O43159 456 aaKnown RBP6.3□□□□□ -1.4
CLCN3-202ENST00000360642 FGF16O43320 207 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 CST2P09228 141 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 GLRA1P23415 457 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 ACKR3P25106 362 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 PPIFP30405 207 aaKnown RBP6.3□□□□□ -1.4
CLCN3-202ENST00000360642 FOLR3P41439 243 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 NAAAQ02083 359 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 SIGLEC14Q08ET2 396 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 Q0VFX4 171 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 BTN1A1Q13410 526 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 ARL6IP1Q15041 203 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 RAB35Q15286 201 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 ZNF528Q3MIS6 628 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 NRN1LQ496H8 165 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 RTL6Q6ICC9 239 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 INO80CQ6PI98 192 aaPredicted RBP6.3□□□□□ -1.4
CLCN3-202ENST00000360642 DRAM2Q6UX65 266 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 ZSCAN4Q8NAM6 433 aaPredicted RBP6.3□□□□□ -1.4
CLCN3-202ENST00000360642 CSNK2A3Q8NEV1 391 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 LHFPL5Q8TAF8 219 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 KCNE4Q8WWG9 221 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 PIGTQ969N2 578 aa6.3□□□□□ -1.4
CLCN3-202ENST00000360642 MCTS1Q9ULC4 181 aaKnown RBP6.3□□□□□ -1.4
CLCN3-202ENST00000360642 URB1O60287 2271 aaKnown RBP6.3□□□□□ -1.4
CLCN3-202ENST00000360642 TRIAP1O43715 76 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 ADAP1O75689 374 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 PDGFBP01127 241 aaPredicted RBP6.29□□□□□ -1.4
CLCN3-202ENST00000360642 OR3A2P47893 321 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 PCP4P48539 62 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 SLC9A3R2Q15599 337 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 H3F3CQ6NXT2 135 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 SLC30A7Q8NEW0 376 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 SEMA6DQ8NFY4 1073 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 ROBO4Q8WZ75 1007 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 DCUN1D4Q92564 292 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 EMG1Q92979 244 aaKnown RBP6.29□□□□□ -1.4
CLCN3-202ENST00000360642 ADGRG7Q96K78 797 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 CDX2Q99626 313 aaPredicted RBP6.29□□□□□ -1.4
CLCN3-202ENST00000360642 TMEM100Q9NV29 134 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 TMEM38BQ9NVV0 291 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 SLC39A1Q9NY26 324 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 EHFQ9NZC4 300 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 COL27A1Q8IZC6 1860 aaPredicted RBP6.29□□□□□ -1.4
CLCN3-202ENST00000360642 OR6C6A6NF89 314 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 TRIM77I1YAP6 450 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 SGCEO43556 437 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 SLC25A17O43808 307 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 IGHEP01854 428 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 PRSS54Q6PEW0 395 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 UNQ6126/PRO20091Q6UXV3 157 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 ASCL4Q6XD76 172 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 C6orf201Q7Z4U5 140 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 ZBTB44Q8NCP5 570 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 MAFIPQ8WZ33 124 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 SPSB1Q96BD6 273 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 OR10C1Q96KK4 312 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 CRLF2Q9HC73 371 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms