RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 NPAS1Q99742 590 aa14.23□□□□□ -0.13
COL18A1-203ENST00000359759 EXOGQ9Y2C4 368 aaKnown RBP14.23□□□□□ -0.13
COL18A1-203ENST00000359759 M0R3E3 92 aa14.23□□□□□ -0.13
COL18A1-203ENST00000359759 GSTZ1O43708 216 aaPredicted RBP14.23□□□□□ -0.13
COL18A1-203ENST00000359759 DLX1P56177 255 aa14.23□□□□□ -0.13
COL18A1-203ENST00000359759 HFEQ30201 348 aa14.23□□□□□ -0.13
COL18A1-203ENST00000359759 RNASE1P07998 156 aaKnown RBP14.23□□□□□ -0.13
COL18A1-203ENST00000359759 FZD5Q13467 585 aa14.23□□□□□ -0.13
COL18A1-203ENST00000359759 ATP6V1FQ16864 119 aa14.23□□□□□ -0.13
COL18A1-203ENST00000359759 OR52L2PQ8NGH6 319 aa14.23□□□□□ -0.13
COL18A1-203ENST00000359759 MAFAQ8NHW3 353 aaPredicted RBP14.23□□□□□ -0.13
COL18A1-203ENST00000359759 TM4SF19Q96DZ7 209 aa14.23□□□□□ -0.13
COL18A1-203ENST00000359759 TBX15Q96SF7 602 aa14.23□□□□□ -0.13
COL18A1-203ENST00000359759 KIF13AQ9H1H9 1805 aa14.23□□□□□ -0.13
COL18A1-203ENST00000359759 SRSF10O75494 262 aaKnown RBP14.23□□□□□ -0.13
COL18A1-203ENST00000359759 APCSP02743 223 aa14.23□□□□□ -0.13
COL18A1-203ENST00000359759 METAP1P53582 386 aa14.23□□□□□ -0.13
COL18A1-203ENST00000359759 PIK3IP1Q96FE7 263 aa14.23□□□□□ -0.13
COL18A1-203ENST00000359759 LRRC61Q9BV99 259 aa14.23□□□□□ -0.13
COL18A1-203ENST00000359759 KCNAB3O43448 404 aa14.23□□□□□ -0.13
COL18A1-203ENST00000359759 B4GALNT1Q00973 533 aa14.23□□□□□ -0.13
COL18A1-203ENST00000359759 IP6K3Q96PC2 410 aa14.23□□□□□ -0.13
COL18A1-203ENST00000359759 SLC17A5Q9NRA2 495 aa14.23□□□□□ -0.13
COL18A1-203ENST00000359759 IGHV3-21A0A0B4J1V1 117 aa14.22□□□□□ -0.13
COL18A1-203ENST00000359759 ANKRD20A5PA0PJZ0 165 aa14.22□□□□□ -0.13
COL18A1-203ENST00000359759 SCGB1A1P11684 91 aa14.22□□□□□ -0.13
COL18A1-203ENST00000359759 MDH2P40926 338 aaKnown RBP14.22□□□□□ -0.13
COL18A1-203ENST00000359759 CDKN2AP42771 156 aaKnown RBP14.22□□□□□ -0.13
COL18A1-203ENST00000359759 NMUP48645 174 aa14.22□□□□□ -0.13
COL18A1-203ENST00000359759 OR1L1Q8NH94 360 aa14.22□□□□□ -0.13
COL18A1-203ENST00000359759 HLA-GP17693 338 aa14.22□□□□□ -0.13
COL18A1-203ENST00000359759 C21orf58P58505 322 aa14.22□□□□□ -0.13
COL18A1-203ENST00000359759 BPIFA4PQ86YQ2 179 aa14.22□□□□□ -0.13
COL18A1-203ENST00000359759 TP53RKQ96S44 253 aa14.22□□□□□ -0.13
COL18A1-203ENST00000359759 ATG101Q9BSB4 218 aa14.22□□□□□ -0.13
COL18A1-203ENST00000359759 AUP1Q9Y679 476 aa14.22□□□□□ -0.13
COL18A1-203ENST00000359759 MT-CO3P00414 261 aa14.22□□□□□ -0.13
COL18A1-203ENST00000359759 WNT5AP41221 380 aa14.22□□□□□ -0.13
COL18A1-203ENST00000359759 WNT3P56703 355 aa14.22□□□□□ -0.13
COL18A1-203ENST00000359759 FAM53BQ14153 422 aa14.22□□□□□ -0.13
COL18A1-203ENST00000359759 SIGLEC1Q9BZZ2 1709 aa14.22□□□□□ -0.13
COL18A1-203ENST00000359759 MKRN2OSH3BPM6 223 aa14.22□□□□□ -0.13
COL18A1-203ENST00000359759 CHST1O43916 411 aa14.22□□□□□ -0.13
COL18A1-203ENST00000359759 PRRX1P54821 245 aa14.22□□□□□ -0.13
COL18A1-203ENST00000359759 SUMO3P55854 103 aaPredicted RBP14.22□□□□□ -0.13
COL18A1-203ENST00000359759 SSX8Q7RTT4 187 aa14.22□□□□□ -0.13
COL18A1-203ENST00000359759 BCL7CQ8WUZ0 217 aaPredicted RBP14.22□□□□□ -0.13
COL18A1-203ENST00000359759 SLC25A1P53007 311 aa14.22□□□□□ -0.13
COL18A1-203ENST00000359759 LRRC75AQ8NAA5 344 aa14.22□□□□□ -0.13
COL18A1-203ENST00000359759 SLC26A1Q9H2B4 701 aa14.22□□□□□ -0.13
COL18A1-203ENST00000359759 IL20Q9NYY1 176 aa14.22□□□□□ -0.13
COL18A1-203ENST00000359759 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.21□□□□□ -0.13
COL18A1-203ENST00000359759 A0A1W2PPC4 97 aa14.21□□□□□ -0.13
COL18A1-203ENST00000359759 A6NDN8 102 aa14.21□□□□□ -0.13
COL18A1-203ENST00000359759 SRP14P37108 136 aaKnown RBP14.21□□□□□ -0.13
COL18A1-203ENST00000359759 PRSS41Q7RTY9 318 aa14.21□□□□□ -0.13
COL18A1-203ENST00000359759 R3HDM4Q96D70 268 aa14.21□□□□□ -0.13
COL18A1-203ENST00000359759 FXYD1O00168 92 aa14.21□□□□□ -0.13
COL18A1-203ENST00000359759 OR10J1P30954 320 aa14.21□□□□□ -0.13
COL18A1-203ENST00000359759 CCR5P51681 352 aa14.21□□□□□ -0.13
COL18A1-203ENST00000359759 FAM109BQ6ICB4 259 aaPredicted RBP14.21□□□□□ -0.13
COL18A1-203ENST00000359759 OR1K1Q8NGR3 316 aa14.21□□□□□ -0.13
COL18A1-203ENST00000359759 MYOZ3Q8TDC0 251 aa14.21□□□□□ -0.13
COL18A1-203ENST00000359759 STAG3L2P0CL84 134 aa14.21□□□□□ -0.13
COL18A1-203ENST00000359759 MDKP21741 143 aaPredicted RBP14.21□□□□□ -0.13
COL18A1-203ENST00000359759 DNAJB12Q9NXW2 375 aaKnown RBP14.21□□□□□ -0.13
COL18A1-203ENST00000359759 MIOXQ9UGB7 285 aa14.21□□□□□ -0.13
COL18A1-203ENST00000359759 IFITM10A6NMD0 228 aa14.21□□□□□ -0.13
COL18A1-203ENST00000359759 COL8A1P27658 744 aa14.21□□□□□ -0.13
COL18A1-203ENST00000359759 COL19A1Q14993 1142 aa14.21□□□□□ -0.13
COL18A1-203ENST00000359759 ADAD2Q8NCV1 583 aaKnown RBP14.21□□□□□ -0.13
COL18A1-203ENST00000359759 OR10AC1Q8NH08 325 aa14.21□□□□□ -0.13
COL18A1-203ENST00000359759 MVB12AQ96EY5 273 aa14.21□□□□□ -0.13
COL18A1-203ENST00000359759 C4orf45Q96LM5 186 aa14.21□□□□□ -0.13
COL18A1-203ENST00000359759 ZNF426Q9BUY5 554 aa14.21□□□□□ -0.13
COL18A1-203ENST00000359759 TSPAN12O95859 305 aa14.21□□□□□ -0.14
COL18A1-203ENST00000359759 GALNSP34059 522 aa14.21□□□□□ -0.14
COL18A1-203ENST00000359759 CCR2P41597 374 aa14.21□□□□□ -0.14
COL18A1-203ENST00000359759 TAS2R60P59551 318 aa14.21□□□□□ -0.14
COL18A1-203ENST00000359759 ADAT3Q96EY9 351 aaPredicted RBP14.21□□□□□ -0.14
COL18A1-203ENST00000359759 WDR13Q9H1Z4 485 aa14.21□□□□□ -0.14
COL18A1-203ENST00000359759 ASCL3Q9NQ33 180 aa14.21□□□□□ -0.14
COL18A1-203ENST00000359759 GPR27Q9NS67 375 aa14.21□□□□□ -0.14
COL18A1-203ENST00000359759 OR4A8P0C604 315 aa14.2□□□□□ -0.14
COL18A1-203ENST00000359759 FAM157CP0CG43 387 aa14.2□□□□□ -0.14
COL18A1-203ENST00000359759 OR4A47Q6IF82 309 aa14.2□□□□□ -0.14
COL18A1-203ENST00000359759 OR2A5Q96R48 311 aa14.2□□□□□ -0.14
COL18A1-203ENST00000359759 PCED1AQ9H1Q7 454 aa14.2□□□□□ -0.14
COL18A1-203ENST00000359759 ZNF275Q9NSD4 429 aaPredicted RBP14.2□□□□□ -0.14
COL18A1-203ENST00000359759 CDK2AP1O14519 115 aa14.2□□□□□ -0.14
COL18A1-203ENST00000359759 LANCL1O43813 399 aa14.2□□□□□ -0.14
COL18A1-203ENST00000359759 ZNF793Q6ZN11 406 aa14.2□□□□□ -0.14
COL18A1-203ENST00000359759 MOGAT1Q96PD6 335 aa14.2□□□□□ -0.14
COL18A1-203ENST00000359759 HSPB8Q9UJY1 196 aa14.2□□□□□ -0.14
COL18A1-203ENST00000359759 PAGE4O60829 102 aa14.2□□□□□ -0.14
COL18A1-203ENST00000359759 BVESQ8NE79 360 aa14.2□□□□□ -0.14
COL18A1-203ENST00000359759 AMMECR1Q9Y4X0 333 aaPredicted RBP14.2□□□□□ -0.14
COL18A1-203ENST00000359759 SNURFLB1AK76 121 aa14.2□□□□□ -0.14
COL18A1-203ENST00000359759 TMPRSS2O15393 492 aa14.2□□□□□ -0.14
COL18A1-203ENST00000359759 KLK10O43240 276 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms