RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 KCNE1BA0A087WTH5 132 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 SKP2Q13309 424 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 FFAR1O14842 300 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 ZNF253O75346 499 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 BCL2P10415 239 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 FABP2P12104 132 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 MMP16P51512 607 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 H1FOOQ8IZA3 346 aaPredicted RBP7.82□□□□□ -1.16
COL6A6-201ENST00000358511 GVQW1Q8N7I0 195 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 OR1P1Q8NH06 330 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 TRMT61AQ96FX7 289 aaKnown RBP7.82□□□□□ -1.16
COL6A6-201ENST00000358511 POM121L2Q96KW2 1035 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 MRGPRX4Q96LA9 322 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 CXCL16Q9H2A7 254 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 KCNK15Q9H427 330 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 ISLRO14498 428 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 OGG1O15527 345 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 TIMP1P01033 207 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 ZBTB25P24278 435 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 TMEM52BQ4KMG9 183 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 DEGS2Q6QHC5 323 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 C16orf82Q7Z2V1 217 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 TGIF2LXQ8IUE1 241 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 MORN4Q8NDC4 146 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 OR11G2Q8NGC1 345 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 HHIPQ96QV1 700 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 C5orf49A4QMS7 147 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 FRG2CA6NGY1 282 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 C5orf52A6NGY3 159 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 SIRPB1O00241 398 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 PHOSPHO2Q8TCD6 241 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 TRGC2P03986 189 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 AGFG1P52594 562 aaKnown RBP7.82□□□□□ -1.16
COL6A6-201ENST00000358511 OR1C1Q15619 314 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 WFDC5Q8TCV5 224 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 FGF14Q92915 247 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 ZNF835Q9Y2P0 537 aa7.82□□□□□ -1.16
COL6A6-201ENST00000358511 SCN10AQ9Y5Y9 1956 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 H0YIG0 161 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 ABLIM3O94929 683 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 FGF2P09038 288 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 RPS4Y1P22090 263 aaKnown RBP7.81□□□□□ -1.16
COL6A6-201ENST00000358511 TNFRSF4P43489 277 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 OR3A4PP47883 348 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 Q8IYB0 196 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 LRFN3Q9BTN0 628 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 COL5A3P25940 1745 aaPredicted RBP7.81□□□□□ -1.16
COL6A6-201ENST00000358511 MDH2P40926 338 aaKnown RBP7.81□□□□□ -1.16
COL6A6-201ENST00000358511 PLP1P60201 277 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 FDX2Q6P4F2 183 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 EIF4E3Q8N5X7 224 aaKnown RBP7.81□□□□□ -1.16
COL6A6-201ENST00000358511 FADS6Q8N9I5 356 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 NAT6Q93015 286 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 LINC00615Q96LM1 132 aaPredicted RBP7.81□□□□□ -1.16
COL6A6-201ENST00000358511 NRSN2Q9GZP1 204 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 MED29Q9NX70 200 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 TRIOBPQ9H2D6 2365 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 IRS1P35568 1242 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 SUCLG1P53597 346 aaKnown RBP7.81□□□□□ -1.16
COL6A6-201ENST00000358511 ZNF880Q6PDB4 577 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 NUFIP2Q7Z417 695 aaKnown RBP7.81□□□□□ -1.16
COL6A6-201ENST00000358511 TMEM251Q8N6I4 163 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 ADAT3Q96EY9 351 aaPredicted RBP7.81□□□□□ -1.16
COL6A6-201ENST00000358511 SH2D2AQ9NP31 389 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 LINC01553A4QN01 128 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 CDC42EP2O14613 210 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 RHBDL1O75783 438 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 CER1O95813 267 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 AAMDCQ9H7C9 122 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 GAGE10A6NGK3 116 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 ST8SIA5O15466 376 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 TLNRD1Q9H1K6 362 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 MARCH5Q9NX47 278 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 VSIG4Q9Y279 399 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 BMP5P22003 454 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 KCNAB1Q14722 419 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 LIAT1Q6ZQX7 453 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 TRBV23-1A0A0A0MS06 115 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 SPRY1O43609 319 aaPredicted RBP7.81□□□□□ -1.16
COL6A6-201ENST00000358511 C12orf76Q8N812 135 aaPredicted RBP7.81□□□□□ -1.16
COL6A6-201ENST00000358511 TIMM9Q9Y5J7 89 aa7.81□□□□□ -1.16
COL6A6-201ENST00000358511 HAND1O96004 215 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 APCSP02743 223 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 FUT7Q11130 342 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 OR10G3Q8NGC4 313 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 MED12LQ86YW9 2145 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 LRRC3CA6NJW4 275 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 CD46P15529 392 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 S100A4P26447 101 aaKnown RBP7.8□□□□□ -1.16
COL6A6-201ENST00000358511 CD38P28907 300 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 PXNP49023 591 aaPredicted RBP7.8□□□□□ -1.16
COL6A6-201ENST00000358511 FAM219BQ5XKK7 198 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 FBXL14Q8N1E6 418 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 OR4A4PQ8NGN8 299 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 TBX21Q9UL17 535 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 TRBV5-3A0A0A0MS03 114 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 DNPH1O43598 174 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 CAMPP49913 170 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 C20orf196Q8IYI0 205 aa7.8□□□□□ -1.16
COL6A6-201ENST00000358511 BAHD1Q8TBE0 780 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms