RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 FHITP49789 147 aa15.33■□□□□ 0.04
RTN4-204ENST00000357732 RBMS3Q6XE24 437 aaKnown RBP15.33■□□□□ 0.04
RTN4-204ENST00000357732 ISOC2Q96AB3 205 aa15.33■□□□□ 0.04
RTN4-204ENST00000357732 YPEL4Q96NS1 127 aa15.33■□□□□ 0.04
RTN4-204ENST00000357732 KIAA1456Q9P272 454 aa15.33■□□□□ 0.04
RTN4-204ENST00000357732 DKKL1Q9UK85 242 aa15.33■□□□□ 0.04
RTN4-204ENST00000357732 FBXO7Q9Y3I1 522 aa15.33■□□□□ 0.04
RTN4-204ENST00000357732 CLEC18AA5D8T8 446 aa15.33■□□□□ 0.04
RTN4-204ENST00000357732 ZIC3O60481 467 aa15.33■□□□□ 0.04
RTN4-204ENST00000357732 FUT3P21217 361 aa15.33■□□□□ 0.04
RTN4-204ENST00000357732 RBM11P57052 281 aaKnown RBP15.33■□□□□ 0.04
RTN4-204ENST00000357732 BAXQ07812 192 aa15.33■□□□□ 0.04
RTN4-204ENST00000357732 CLEC9AQ6UXN8 241 aa15.33■□□□□ 0.04
RTN4-204ENST00000357732 TMEM182Q6ZP80 229 aaPredicted RBP15.33■□□□□ 0.04
RTN4-204ENST00000357732 FAM24BQ8N5W8 94 aa15.33■□□□□ 0.04
RTN4-204ENST00000357732 CLEC18CQ8NCF0 446 aa15.33■□□□□ 0.04
RTN4-204ENST00000357732 OR2AE1Q8NHA4 323 aa15.33■□□□□ 0.04
RTN4-204ENST00000357732 FAM213BQ8TBF2 198 aa15.33■□□□□ 0.04
RTN4-204ENST00000357732 GNPNAT1Q96EK6 184 aaPredicted RBP15.33■□□□□ 0.04
RTN4-204ENST00000357732 UCN2Q96RP3 112 aa15.33■□□□□ 0.04
RTN4-204ENST00000357732 AKIRIN1Q9H9L7 192 aaPredicted RBP15.33■□□□□ 0.04
RTN4-204ENST00000357732 NIT2Q9NQR4 276 aa15.33■□□□□ 0.04
RTN4-204ENST00000357732 TMEM38BQ9NVV0 291 aa15.33■□□□□ 0.04
RTN4-204ENST00000357732 CABIN1Q9Y6J0 2220 aa15.32■□□□□ 0.04
RTN4-204ENST00000357732 IGHV5-10-1A0A0J9YXX1 117 aa15.32■□□□□ 0.04
RTN4-204ENST00000357732 A0A1W2PQM1 296 aa15.32■□□□□ 0.04
RTN4-204ENST00000357732 PPYP01298 95 aa15.32■□□□□ 0.04
RTN4-204ENST00000357732 LCATP04180 440 aa15.32■□□□□ 0.04
RTN4-204ENST00000357732 OR8U8P0C7N1 319 aa15.32■□□□□ 0.04
RTN4-204ENST00000357732 NKX2-1P43699 371 aaPredicted RBP15.32■□□□□ 0.04
RTN4-204ENST00000357732 RAC3P60763 192 aa15.32■□□□□ 0.04
RTN4-204ENST00000357732 PCBD1P61457 104 aa15.32■□□□□ 0.04
RTN4-204ENST00000357732 TSPO2Q5TGU0 170 aa15.32■□□□□ 0.04
RTN4-204ENST00000357732 DPPA3Q6W0C5 159 aa15.32■□□□□ 0.04
RTN4-204ENST00000357732 SLC16A13Q7RTY0 426 aa15.32■□□□□ 0.04
RTN4-204ENST00000357732 WDR5BQ86VZ2 330 aa15.32■□□□□ 0.04
RTN4-204ENST00000357732 Q8NFD4 153 aa15.32■□□□□ 0.04
RTN4-204ENST00000357732 PAPOLGQ9BWT3 736 aaKnown RBP15.32■□□□□ 0.04
RTN4-204ENST00000357732 SH2D2AQ9NP31 389 aa15.32■□□□□ 0.04
RTN4-204ENST00000357732 LYRM2Q9NU23 88 aaPredicted RBP15.32■□□□□ 0.04
RTN4-204ENST00000357732 MYO7BQ6PIF6 2116 aa15.32■□□□□ 0.04
RTN4-204ENST00000357732 IGKV1-12A0A0C4DH73 117 aa15.32■□□□□ 0.04
RTN4-204ENST00000357732 hCG_38984A0A1B0GV85 526 aa15.32■□□□□ 0.04
RTN4-204ENST00000357732 IGKV1D-12P01611 117 aa15.32■□□□□ 0.04
RTN4-204ENST00000357732 CCL7P80098 99 aa15.32■□□□□ 0.04
RTN4-204ENST00000357732 HEPN1Q6WQI6 88 aa15.32■□□□□ 0.04
RTN4-204ENST00000357732 M1APQ8TC57 530 aa15.32■□□□□ 0.04
RTN4-204ENST00000357732 IGHV3-15A0A0B4J1V0 119 aa15.31■□□□□ 0.04
RTN4-204ENST00000357732 hCG_1809904A0A1W2PP81 198 aa15.31■□□□□ 0.04
RTN4-204ENST00000357732 A0A1W2PPE3 182 aa15.31■□□□□ 0.04
RTN4-204ENST00000357732 A0A1W2PR64 198 aa15.31■□□□□ 0.04
RTN4-204ENST00000357732 A0A1W2PRV1 198 aa15.31■□□□□ 0.04
RTN4-204ENST00000357732 RBFOX3A6NFN3 312 aa15.31■□□□□ 0.04
RTN4-204ENST00000357732 ZNF732B4DXR9 585 aa15.31■□□□□ 0.04
RTN4-204ENST00000357732 CBR3O75828 277 aa15.31■□□□□ 0.04
RTN4-204ENST00000357732 AADACP22760 399 aa15.31■□□□□ 0.04
RTN4-204ENST00000357732 RPS23P62266 143 aaKnown RBP15.31■□□□□ 0.04
RTN4-204ENST00000357732 PIGYQ3MUY2 71 aa15.31■□□□□ 0.04
RTN4-204ENST00000357732 ADAM5Q6NVV9 412 aa15.31■□□□□ 0.04
RTN4-204ENST00000357732 TP53RKQ96S44 253 aa15.31■□□□□ 0.04
RTN4-204ENST00000357732 C20orf24Q9BUV8 137 aa15.31■□□□□ 0.04
RTN4-204ENST00000357732 ZNF700Q9H0M5 742 aa15.31■□□□□ 0.04
RTN4-204ENST00000357732 IGHV1-45A0A0A0MS14 117 aa15.31■□□□□ 0.04
RTN4-204ENST00000357732 ZNF816-ZNF321PA0A0X1KG74 233 aa15.31■□□□□ 0.04
RTN4-204ENST00000357732 CXorf65A6NEN9 183 aa15.31■□□□□ 0.04
RTN4-204ENST00000357732 C1QL1O75973 258 aa15.31■□□□□ 0.04
RTN4-204ENST00000357732 OR2C1O95371 312 aa15.31■□□□□ 0.04
RTN4-204ENST00000357732 PPP1CCP36873 323 aaKnown RBP15.31■□□□□ 0.04
RTN4-204ENST00000357732 RGS19P49795 217 aa15.31■□□□□ 0.04
RTN4-204ENST00000357732 FOXO1Q12778 655 aa15.31■□□□□ 0.04
RTN4-204ENST00000357732 RIPPLY2Q5TAB7 128 aa15.31■□□□□ 0.04
RTN4-204ENST00000357732 DPPA2Q7Z7J5 298 aa15.31■□□□□ 0.04
RTN4-204ENST00000357732 OR2G3Q8NGZ4 309 aa15.31■□□□□ 0.04
RTN4-204ENST00000357732 KIAA1549Q9HCM3 1950 aa15.3■□□□□ 0.04
RTN4-204ENST00000357732 A0A0J9YW62 118 aa15.3■□□□□ 0.04
RTN4-204ENST00000357732 LINC00587B1AMM8 73 aa15.3■□□□□ 0.04
RTN4-204ENST00000357732 CBR1P16152 277 aa15.3■□□□□ 0.04
RTN4-204ENST00000357732 ATP6V0CP27449 155 aa15.3■□□□□ 0.04
RTN4-204ENST00000357732 SSR4P51571 173 aa15.3■□□□□ 0.04
RTN4-204ENST00000357732 ZNF774Q6NX45 483 aa15.3■□□□□ 0.04
RTN4-204ENST00000357732 KCNE4Q8WWG9 221 aa15.3■□□□□ 0.04
RTN4-204ENST00000357732 RBMXL1Q96E39 390 aaKnown RBP15.3■□□□□ 0.04
RTN4-204ENST00000357732 IMMP1LQ96LU5 166 aa15.3■□□□□ 0.04
RTN4-204ENST00000357732 CCDC74BQ96LY2 380 aa15.3■□□□□ 0.04
RTN4-204ENST00000357732 PROK2Q9HC23 129 aa15.3■□□□□ 0.04
RTN4-204ENST00000357732 A0A1W2PPE2 198 aa15.29■□□□□ 0.04
RTN4-204ENST00000357732 HSPB1P04792 205 aaKnown RBP15.29■□□□□ 0.04
RTN4-204ENST00000357732 CCL3P10147 92 aa15.29■□□□□ 0.04
RTN4-204ENST00000357732 FGF5P12034 268 aa15.29■□□□□ 0.04
RTN4-204ENST00000357732 CEACAM1P13688 526 aa15.29■□□□□ 0.04
RTN4-204ENST00000357732 RAB2AP61019 212 aa15.29■□□□□ 0.04
RTN4-204ENST00000357732 OR8G1Q15617 311 aa15.29■□□□□ 0.04
RTN4-204ENST00000357732 SP5Q6BEB4 398 aaPredicted RBP15.29■□□□□ 0.04
RTN4-204ENST00000357732 ZNF695Q8IW36 515 aa15.29■□□□□ 0.04
RTN4-204ENST00000357732 OR11L1Q8NGX0 322 aa15.29■□□□□ 0.04
RTN4-204ENST00000357732 IL22RA2Q969J5 263 aa15.29■□□□□ 0.04
RTN4-204ENST00000357732 SIRT7Q9NRC8 400 aa15.29■□□□□ 0.04
RTN4-204ENST00000357732 RPL36A-HNRNPH2H7BZ11 118 aa15.29■□□□□ 0.04
RTN4-204ENST00000357732 LINC01387J3KSC0 135 aa15.29■□□□□ 0.04
RTN4-204ENST00000357732 CELA2AP08217 269 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms