RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 COMPP49747 757 aaPredicted RBP5.89□□□□□ -1.47
VPS13A-201ENST00000355766 GZMKP49863 264 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 FUT6P51993 359 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 RAG2P55895 527 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 FAM3AP98173 230 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 SPOCK1Q08629 439 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 ZMYND11Q15326 602 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 KISS1Q15726 138 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 TAB1Q15750 504 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 TIMM23BQ5SRD1 257 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 NCMAPQ5T1S8 102 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 ASCL4Q6XD76 172 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 MRPL21Q7Z2W9 205 aaKnown RBP5.89□□□□□ -1.47
VPS13A-201ENST00000355766 ZNF584Q8IVC4 421 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 CMTM4Q8IZR5 234 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 ZNF525Q8N782 197 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 POC5Q8NA72 575 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 DUSP18Q8NEJ0 188 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 PXT1Q8NFP0 134 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 STEAP2Q8NFT2 490 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 OR4M2Q8NGB6 313 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 OR52N4Q8NGI2 321 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 OR51A2Q8NGJ7 313 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 OR5H6Q8NGV6 325 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 CHAC2Q8WUX2 184 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 FCAMRQ8WWV6 532 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 YIPF5Q969M3 257 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 CREB3L1Q96BA8 519 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 THAP7Q9BT49 309 aaPredicted RBP5.89□□□□□ -1.47
VPS13A-201ENST00000355766 URM1Q9BTM9 101 aaKnown RBP5.89□□□□□ -1.47
VPS13A-201ENST00000355766 EIF3KQ9UBQ5 218 aaKnown RBP5.89□□□□□ -1.47
VPS13A-201ENST00000355766 SLC7A11Q9UPY5 501 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 MPC1Q9Y5U8 109 aa5.89□□□□□ -1.47
VPS13A-201ENST00000355766 IGKV1-9A0A0C4DH69 117 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 C5orf49A4QMS7 147 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 SERPINE3A8MV23 424 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 GMDSO60547 372 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 LPLP06858 475 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 MELTFP08582 738 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 HCKP08631 526 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 CSF1P09603 554 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 TRAPPC2P0DI81 140 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 TRAPPC2BP0DI82 140 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 USF1P22415 310 aaPredicted RBP5.88□□□□□ -1.47
VPS13A-201ENST00000355766 CPT2P23786 658 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 CDK2P24941 298 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 SLC6A1P30531 599 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 PMELP40967 661 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 PTGFRP43088 359 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 MAGEB1P43366 347 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 RBP2P50120 134 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 TAS2R20P59543 309 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 ZNF92Q03936 586 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 GK2Q14410 553 aaPredicted RBP5.88□□□□□ -1.47
VPS13A-201ENST00000355766 P2RY14Q15391 338 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 BAK1Q16611 211 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 PNLIPRP3Q17RR3 467 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 C2orf76Q3KRA6 126 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 HIKESHIQ53FT3 197 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 NHLRC3Q5JS37 347 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 OLFML2AQ68BL7 652 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 AWAT2Q6E213 333 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 BHLHA15Q7RTS1 189 aaPredicted RBP5.88□□□□□ -1.47
VPS13A-201ENST00000355766 LINC00596Q86U02 117 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 MDP1Q86V88 176 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 TOMM5Q8N4H5 51 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 Q8NFD4 153 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 OR51D1Q8NGF3 324 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 OR56B1Q8NGI3 324 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 OR4D6Q8NGJ1 314 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 FGFBP3Q8TAT2 258 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 ENKURQ8TC29 256 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 C10orf105Q8TEF2 133 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 HTRA1Q92743 480 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 FAM46BQ96A09 425 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 C1orf147Q96MC9 270 aaPredicted RBP5.88□□□□□ -1.47
VPS13A-201ENST00000355766 ABHD1Q96SE0 405 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 TM2D1Q9BX74 207 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 TMEM59Q9BXS4 323 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 CACNG6Q9BXT2 260 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 BCL2L14Q9BZR8 327 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 CDH20Q9HBT6 801 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 MRPS28Q9Y2Q9 187 aaKnown RBP5.88□□□□□ -1.47
VPS13A-201ENST00000355766 TRRAPQ9Y4A5 3859 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 ROS1P08922 2347 aa5.88□□□□□ -1.47
VPS13A-201ENST00000355766 A0A0A6YYJ9 748 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 A0A1B0GWJ7 208 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 ANKRD30BLA7E2S9 258 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 H7C417 338 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 RAB27BO00194 218 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 LYRM1O43325 122 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 RAD51DO75771 328 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 NRASP01111 189 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 IL32P24001 234 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 ACKR3P25106 362 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 MPZP25189 248 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 RAD52P43351 418 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 CBX5P45973 191 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 ATP1B3P54709 279 aa5.87□□□□□ -1.47
VPS13A-201ENST00000355766 CLDN12P56749 244 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms