RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 MGPP08493 103 aa13.19□□□□□ -0.3
LMX1B-201ENST00000355497 SLC25A30Q5SVS4 291 aa13.19□□□□□ -0.3
LMX1B-201ENST00000355497 NCMAPQ5T1S8 102 aa13.19□□□□□ -0.3
LMX1B-201ENST00000355497 DEFB123Q8N688 67 aa13.19□□□□□ -0.3
LMX1B-201ENST00000355497 TMEM251Q8N6I4 163 aa13.19□□□□□ -0.3
LMX1B-201ENST00000355497 RAB1BQ9H0U4 201 aa13.19□□□□□ -0.3
LMX1B-201ENST00000355497 PRSS50Q9UI38 385 aa13.19□□□□□ -0.3
LMX1B-201ENST00000355497 HSPB8Q9UJY1 196 aa13.19□□□□□ -0.3
LMX1B-201ENST00000355497 ANKRD12Q6UB98 2062 aa13.19□□□□□ -0.3
LMX1B-201ENST00000355497 A0A087X0M5 115 aa13.19□□□□□ -0.3
LMX1B-201ENST00000355497 A0A1B0GX30 115 aa13.19□□□□□ -0.3
LMX1B-201ENST00000355497 PLPP3O14495 311 aa13.19□□□□□ -0.3
LMX1B-201ENST00000355497 KLK10O43240 276 aa13.19□□□□□ -0.3
LMX1B-201ENST00000355497 POLR2GP62487 172 aaKnown RBP eCLIP13.19□□□□□ -0.3
LMX1B-201ENST00000355497 ADIPOQQ15848 244 aa13.19□□□□□ -0.3
LMX1B-201ENST00000355497 PRICKLE4Q2TBC4 344 aa13.19□□□□□ -0.3
LMX1B-201ENST00000355497 SH2D5Q6ZV89 423 aa13.19□□□□□ -0.3
LMX1B-201ENST00000355497 RHBDL1O75783 438 aa13.19□□□□□ -0.3
LMX1B-201ENST00000355497 IL11RAQ14626 422 aa13.19□□□□□ -0.3
LMX1B-201ENST00000355497 PSG5Q15238 335 aa13.19□□□□□ -0.3
LMX1B-201ENST00000355497 SEZ6L2Q6UXD5 910 aa13.19□□□□□ -0.3
LMX1B-201ENST00000355497 N4BP2Q86UW6 1770 aaPredicted RBP13.19□□□□□ -0.3
LMX1B-201ENST00000355497 ASPDHA6ND91 283 aa13.19□□□□□ -0.3
LMX1B-201ENST00000355497 CCL2P13500 99 aa13.19□□□□□ -0.3
LMX1B-201ENST00000355497 SUCLG1P53597 346 aaKnown RBP13.19□□□□□ -0.3
LMX1B-201ENST00000355497 CA5BP1Q8WTZ4 195 aa13.19□□□□□ -0.3
LMX1B-201ENST00000355497 OOEPA6NGQ2 149 aa13.19□□□□□ -0.3
LMX1B-201ENST00000355497 PRR35P0CG20 571 aa13.19□□□□□ -0.3
LMX1B-201ENST00000355497 MRPS11P82912 194 aaKnown RBP13.19□□□□□ -0.3
LMX1B-201ENST00000355497 TMEM211Q6ICI0 200 aa13.19□□□□□ -0.3
LMX1B-201ENST00000355497 GABRG3Q99928 467 aa13.19□□□□□ -0.3
LMX1B-201ENST00000355497 LPAR5Q9H1C0 372 aa13.19□□□□□ -0.3
LMX1B-201ENST00000355497 C4AP0C0L4 1744 aa13.18□□□□□ -0.3
LMX1B-201ENST00000355497 CXorf51AA0A1B0GTR3 108 aa13.18□□□□□ -0.3
LMX1B-201ENST00000355497 OR4C46A6NHA9 309 aa13.18□□□□□ -0.3
LMX1B-201ENST00000355497 CORTO00230 105 aa13.18□□□□□ -0.3
LMX1B-201ENST00000355497 MVDP53602 400 aa13.18□□□□□ -0.3
LMX1B-201ENST00000355497 GVQW1Q8N7I0 195 aa13.18□□□□□ -0.3
LMX1B-201ENST00000355497 MPC1Q9Y5U8 109 aa13.18□□□□□ -0.3
LMX1B-201ENST00000355497 CDRT15L2A8MXV6 281 aa13.18□□□□□ -0.3
LMX1B-201ENST00000355497 FAM157AC9JC47 383 aa13.18□□□□□ -0.3
LMX1B-201ENST00000355497 SYNGR2O43760 224 aa13.18□□□□□ -0.3
LMX1B-201ENST00000355497 LYZL6O75951 148 aa13.18□□□□□ -0.3
LMX1B-201ENST00000355497 GABRA1P14867 456 aa13.18□□□□□ -0.3
LMX1B-201ENST00000355497 OR10J1P30954 320 aa13.18□□□□□ -0.3
LMX1B-201ENST00000355497 ZNF770Q6IQ21 691 aaPredicted RBP13.18□□□□□ -0.3
LMX1B-201ENST00000355497 OR5AU1Q8NGC0 362 aa13.18□□□□□ -0.3
LMX1B-201ENST00000355497 OR4P4Q8NGL7 312 aa13.18□□□□□ -0.3
LMX1B-201ENST00000355497 FLYWCH2Q96CP2 140 aaKnown RBP13.18□□□□□ -0.3
LMX1B-201ENST00000355497 ELOVL1Q9BW60 279 aa13.18□□□□□ -0.3
LMX1B-201ENST00000355497 GPR27Q9NS67 375 aa13.18□□□□□ -0.3
LMX1B-201ENST00000355497 TNFRSF19Q9NS68 423 aa13.18□□□□□ -0.3
LMX1B-201ENST00000355497 MICAL3Q7RTP6 2002 aa13.18□□□□□ -0.3
LMX1B-201ENST00000355497 COL16A1Q07092 1604 aaPredicted RBP13.18□□□□□ -0.3
LMX1B-201ENST00000355497 A0A1B0GTH9 108 aa13.18□□□□□ -0.3
LMX1B-201ENST00000355497 CDKN2AP42771 156 aaKnown RBP13.18□□□□□ -0.3
LMX1B-201ENST00000355497 ZNF793Q6ZN11 406 aa13.18□□□□□ -0.3
LMX1B-201ENST00000355497 CA10Q9NS85 328 aa13.18□□□□□ -0.3
LMX1B-201ENST00000355497 M0R3E3 92 aa13.18□□□□□ -0.3
LMX1B-201ENST00000355497 C21orf58P58505 322 aa13.18□□□□□ -0.3
LMX1B-201ENST00000355497 MYOZ3Q8TDC0 251 aa13.18□□□□□ -0.3
LMX1B-201ENST00000355497 RAB37Q96AX2 223 aa13.18□□□□□ -0.3
LMX1B-201ENST00000355497 GNG7O60262 68 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 DLK1P80370 383 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 SURF2Q15527 256 aaPredicted RBP13.17□□□□□ -0.3
LMX1B-201ENST00000355497 LINC01565O15544 149 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 IGHV3-13P01766 116 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 IGHV3-7P01780 117 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 SELENOPP49908 381 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 EIF3IQ13347 325 aaKnown RBP13.17□□□□□ -0.3
LMX1B-201ENST00000355497 BPIFA4PQ86YQ2 179 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 SPNS2Q8IVW8 549 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 TP53I13Q8NBR0 393 aaPredicted RBP13.17□□□□□ -0.3
LMX1B-201ENST00000355497 FGF14Q92915 247 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 RAB1CQ92928 201 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 TRAV38-1A0A0B4J264 116 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 SMPD2O60906 423 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 ARG1P05089 322 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 COL8A1P27658 744 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 CD300LDQ6UXZ3 194 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 DPPA3Q6W0C5 159 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 LINC00052Q96N35 136 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 MARVELD1Q9BSK0 173 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 VAX2Q9UIW0 290 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 AMDHD2Q9Y303 409 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 PDE6DO43924 150 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 SRSF10O75494 262 aaKnown RBP13.17□□□□□ -0.3
LMX1B-201ENST00000355497 BRS3P32247 399 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 CCR2P41597 374 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 ZNF343Q6P1L6 599 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 OR10A7Q8NGE5 316 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 OR8B3Q8NGG8 313 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 ASB10Q8WXI3 467 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 OR8B2Q96RD0 313 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 RASL11BQ9BPW5 248 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 ZFP64Q9NPA5 681 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 MFSD2BA6NFX1 497 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 J3KRW8 73 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 APCSP02743 223 aa13.17□□□□□ -0.3
LMX1B-201ENST00000355497 GABRG2P18507 467 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms