RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 BCL3P20749 454 aa15.9■□□□□ 0.14
COL18A1-202ENST00000355480 SSX1Q16384 188 aa15.9■□□□□ 0.14
COL18A1-202ENST00000355480 COMMD1Q8N668 190 aa15.9■□□□□ 0.14
COL18A1-202ENST00000355480 SLIRPQ9GZT3 109 aaKnown RBP15.9■□□□□ 0.14
COL18A1-202ENST00000355480 FABP4P15090 132 aa15.9■□□□□ 0.14
COL18A1-202ENST00000355480 ZNF561Q8N587 486 aa15.9■□□□□ 0.14
COL18A1-202ENST00000355480 OR2C3Q8N628 320 aa15.9■□□□□ 0.14
COL18A1-202ENST00000355480 R3HDM4Q96D70 268 aa15.9■□□□□ 0.14
COL18A1-202ENST00000355480 ABHD14AQ9BUJ0 271 aa15.9■□□□□ 0.14
COL18A1-202ENST00000355480 RPS4XP62701 263 aaKnown RBP15.9■□□□□ 0.14
COL18A1-202ENST00000355480 PTPMT1Q8WUK0 201 aaPredicted RBP15.9■□□□□ 0.14
COL18A1-202ENST00000355480 KCNK15Q9H427 330 aa15.9■□□□□ 0.14
COL18A1-202ENST00000355480 TRDCB7Z8K6 153 aa15.9■□□□□ 0.14
COL18A1-202ENST00000355480 MMP7P09237 267 aaPredicted RBP15.9■□□□□ 0.14
COL18A1-202ENST00000355480 COL19A1Q14993 1142 aa15.9■□□□□ 0.14
COL18A1-202ENST00000355480 OR10AC1Q8NH08 325 aa15.9■□□□□ 0.14
COL18A1-202ENST00000355480 NAT8BQ9UHF3 227 aa15.9■□□□□ 0.14
COL18A1-202ENST00000355480 WSB1Q9Y6I7 421 aa15.9■□□□□ 0.14
COL18A1-202ENST00000355480 ST3GAL2Q16842 350 aa15.89■□□□□ 0.13
COL18A1-202ENST00000355480 RNF151Q2KHN1 245 aa15.89■□□□□ 0.13
COL18A1-202ENST00000355480 RNASEKQ6P5S7 137 aaKnown RBP15.89■□□□□ 0.13
COL18A1-202ENST00000355480 GPR35Q9HC97 309 aa15.89■□□□□ 0.13
COL18A1-202ENST00000355480 SH2D2AQ9NP31 389 aa15.89■□□□□ 0.13
COL18A1-202ENST00000355480 C1RLQ9NZP8 487 aa15.89■□□□□ 0.13
COL18A1-202ENST00000355480 CDK5RAP2Q96SN8 1893 aa15.89■□□□□ 0.13
COL18A1-202ENST00000355480 OR2H1Q9GZK4 316 aa15.89■□□□□ 0.13
COL18A1-202ENST00000355480 HEXA-AS1Q9H8Q6 139 aa15.89■□□□□ 0.13
COL18A1-202ENST00000355480 DOCK1Q14185 1865 aa15.89■□□□□ 0.13
COL18A1-202ENST00000355480 IL13RA2Q14627 380 aa15.89■□□□□ 0.13
COL18A1-202ENST00000355480 AANATQ16613 207 aa15.89■□□□□ 0.13
COL18A1-202ENST00000355480 ZNF441Q8N8Z8 693 aa15.89■□□□□ 0.13
COL18A1-202ENST00000355480 OR10G4Q8NGN3 311 aa15.89■□□□□ 0.13
COL18A1-202ENST00000355480 OR10G9Q8NGN4 311 aa15.89■□□□□ 0.13
COL18A1-202ENST00000355480 OR10G7Q8NGN6 311 aa15.89■□□□□ 0.13
COL18A1-202ENST00000355480 OR5R1Q8NH85 324 aa15.89■□□□□ 0.13
COL18A1-202ENST00000355480 UCN2Q96RP3 112 aa15.89■□□□□ 0.13
COL18A1-202ENST00000355480 TEX261Q6UWH6 196 aa15.89■□□□□ 0.13
COL18A1-202ENST00000355480 MS4A5Q9H3V2 200 aa15.89■□□□□ 0.13
COL18A1-202ENST00000355480 KCNMB2Q9Y691 235 aa15.89■□□□□ 0.13
COL18A1-202ENST00000355480 U3KQ87 197 aa15.89■□□□□ 0.13
COL18A1-202ENST00000355480 C16orf97H3BN30 126 aa15.89■□□□□ 0.13
COL18A1-202ENST00000355480 ZNF737O75373 536 aa15.89■□□□□ 0.13
COL18A1-202ENST00000355480 PNLIPP16233 465 aa15.89■□□□□ 0.13
COL18A1-202ENST00000355480 MRM1Q6IN84 353 aaKnown RBP15.89■□□□□ 0.13
COL18A1-202ENST00000355480 KLHDC1Q8N7A1 406 aa15.89■□□□□ 0.13
COL18A1-202ENST00000355480 ZNF665Q9H7R5 613 aa15.89■□□□□ 0.13
COL18A1-202ENST00000355480 TIAL1Q01085 375 aaKnown RBP eCLIP15.88■□□□□ 0.132e-6■■■□□ 16
COL18A1-202ENST00000355480 STARD10Q9Y365 291 aa15.88■□□□□ 0.13
COL18A1-202ENST00000355480 CD200P41217 278 aa15.88■□□□□ 0.13
COL18A1-202ENST00000355480 XAF1Q6GPH4 301 aa15.88■□□□□ 0.13
COL18A1-202ENST00000355480 TBC1D26Q86UD7 250 aa15.88■□□□□ 0.13
COL18A1-202ENST00000355480 SLC52A3Q9NQ40 469 aa15.88■□□□□ 0.13
COL18A1-202ENST00000355480 GEMIN2O14893 280 aaKnown RBP15.88■□□□□ 0.13
COL18A1-202ENST00000355480 GNG7O60262 68 aa15.88■□□□□ 0.13
COL18A1-202ENST00000355480 ASCL5Q7RTU5 278 aa15.88■□□□□ 0.13
COL18A1-202ENST00000355480 GATCO43716 136 aaKnown RBP15.88■□□□□ 0.13
COL18A1-202ENST00000355480 CA10Q9NS85 328 aa15.88■□□□□ 0.13
COL18A1-202ENST00000355480 MED19A0JLT2 244 aaPredicted RBP15.87■□□□□ 0.13
COL18A1-202ENST00000355480 SFTPCP11686 197 aa15.87■□□□□ 0.13
COL18A1-202ENST00000355480 GALR1P47211 349 aa15.87■□□□□ 0.13
COL18A1-202ENST00000355480 MVDP53602 400 aa15.87■□□□□ 0.13
COL18A1-202ENST00000355480 TMEM241Q24JQ0 296 aa15.87■□□□□ 0.13
COL18A1-202ENST00000355480 HTR1DP28221 377 aa15.87■□□□□ 0.13
COL18A1-202ENST00000355480 PMELP40967 661 aa15.87■□□□□ 0.13
COL18A1-202ENST00000355480 SPICQ8N5J4 248 aa15.87■□□□□ 0.13
COL18A1-202ENST00000355480 TMUB1Q9BVT8 246 aa15.87■□□□□ 0.13
COL18A1-202ENST00000355480 WDR54Q9H977 334 aa15.87■□□□□ 0.13
COL18A1-202ENST00000355480 LPAR2Q9HBW0 351 aa15.87■□□□□ 0.13
COL18A1-202ENST00000355480 LIFP15018 202 aa15.87■□□□□ 0.13
COL18A1-202ENST00000355480 SLC6A1P30531 599 aa15.87■□□□□ 0.13
COL18A1-202ENST00000355480 C21orf58P58505 322 aa15.87■□□□□ 0.13
COL18A1-202ENST00000355480 ATP6V1FQ16864 119 aa15.87■□□□□ 0.13
COL18A1-202ENST00000355480 UBE2L3P68036 154 aaKnown RBP15.87■□□□□ 0.13
COL18A1-202ENST00000355480 OR2M3Q8NG83 312 aa15.87■□□□□ 0.13
COL18A1-202ENST00000355480 SLC25A40Q8TBP6 338 aa15.87■□□□□ 0.13
COL18A1-202ENST00000355480 ZNF764Q96H86 408 aaPredicted RBP15.87■□□□□ 0.13
COL18A1-202ENST00000355480 TCRBV16S1A1N1A0A5B0 115 aa15.87■□□□□ 0.13
COL18A1-202ENST00000355480 HOXC8P31273 242 aa15.87■□□□□ 0.13
COL18A1-202ENST00000355480 UCNP55089 124 aa15.87■□□□□ 0.13
COL18A1-202ENST00000355480 VAMP3Q15836 100 aa15.87■□□□□ 0.13
COL18A1-202ENST00000355480 TGIF2LYQ8IUE0 185 aa15.87■□□□□ 0.13
COL18A1-202ENST00000355480 TMEM171Q8WVE6 324 aa15.87■□□□□ 0.13
COL18A1-202ENST00000355480 MPC2O95563 127 aa15.86■□□□□ 0.13
COL18A1-202ENST00000355480 ZBTB37Q5TC79 503 aa15.86■□□□□ 0.13
COL18A1-202ENST00000355480 C19orf35Q6ZS72 473 aa15.86■□□□□ 0.13
COL18A1-202ENST00000355480 PRSS3P2Q8NHM4 247 aa15.86■□□□□ 0.13
COL18A1-202ENST00000355480 MMP26Q9NRE1 261 aa15.86■□□□□ 0.13
COL18A1-202ENST00000355480 ANXA10Q9UJ72 324 aa15.86■□□□□ 0.13
COL18A1-202ENST00000355480 NEURL1O76050 574 aa15.86■□□□□ 0.13
COL18A1-202ENST00000355480 SCGB1C2P0DMR2 95 aa15.86■□□□□ 0.13
COL18A1-202ENST00000355480 ZNF66Q6ZN08 573 aa15.86■□□□□ 0.13
COL18A1-202ENST00000355480 TMEM37Q8WXS4 190 aa15.86■□□□□ 0.13
COL18A1-202ENST00000355480 WDFY2Q96P53 400 aa15.86■□□□□ 0.13
COL18A1-202ENST00000355480 GZMHP20718 246 aa15.86■□□□□ 0.13
COL18A1-202ENST00000355480 PDPNQ86YL7 162 aa15.86■□□□□ 0.13
COL18A1-202ENST00000355480 LILRB1Q8NHL6 650 aaPredicted RBP15.86■□□□□ 0.13
COL18A1-202ENST00000355480 INSIG2Q9Y5U4 225 aa15.86■□□□□ 0.13
COL18A1-202ENST00000355480 PAPPAQ13219 1627 aa15.86■□□□□ 0.13
COL18A1-202ENST00000355480 FGF8P55075 233 aaPredicted RBP15.86■□□□□ 0.13
COL18A1-202ENST00000355480 SPCS3P61009 180 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms