RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 ZNF679Q8IYX0 411 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 SETD6Q8TBK2 473 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 POM121Q96HA1 1249 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 RITA1Q96K30 269 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 NXT1Q9UKK6 140 aaKnown RBP4.71□□□□□ -1.66
CD47-201ENST00000355354 ZNF175Q9Y473 711 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 TTLL8A6PVC2 850 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 L7N2F9 121 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 EREGO14944 169 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 RRP8O43159 456 aaKnown RBP4.71□□□□□ -1.66
CD47-201ENST00000355354 HLA-DQA2P01906 255 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 HEXBP07686 556 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 OR13C7P0DN81 318 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 SFTPCP11686 197 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 SERPINA2P20848 420 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 PAICSP22234 425 aaKnown RBP4.71□□□□□ -1.66
CD47-201ENST00000355354 RNF4P78317 190 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 PLPPR5Q32ZL2 321 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 ZNF585BQ52M93 769 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 UTP23Q9BRU9 249 aaKnown RBP4.71□□□□□ -1.66
CD47-201ENST00000355354 TMEM138Q9NPI0 162 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 ZNF275Q9NSD4 429 aaPredicted RBP4.71□□□□□ -1.66
CD47-201ENST00000355354 MIOXQ9UGB7 285 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 DNAH6Q9C0G6 4158 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 SH2D7A6NKC9 451 aaPredicted RBP4.71□□□□□ -1.66
CD47-201ENST00000355354 RFPL4AA6NLU0 287 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 RFPL4AL1F8VTS6 287 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 RAB3DO95716 219 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 PGA4P0DJD7 388 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 NDUFB7P17568 137 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 STOMP27105 288 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 B3GALT5-AS1P59052 145 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 STX4Q12846 297 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 KRT33BQ14525 404 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 CCDC92Q53HC0 331 aaPredicted RBP4.71□□□□□ -1.66
CD47-201ENST00000355354 ULK3Q6PHR2 472 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 LINC00696Q6ZRV3 163 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 PPP1R32Q7Z5V6 425 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 FBXL14Q8N1E6 418 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 OR5L1Q8NGL2 311 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 SFT2D1Q8WV19 159 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 RNF138Q8WVD3 245 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 ZNF471Q9BX82 626 aaPredicted RBP4.71□□□□□ -1.66
CD47-201ENST00000355354 TRIM36Q9NQ86 728 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 RPRMQ9NS64 109 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 TAAR3PQ9P1P4 343 aa4.71□□□□□ -1.66
CD47-201ENST00000355354 PURGQ9UJV8 347 aaKnown RBP4.71□□□□□ -1.66
CD47-201ENST00000355354 KIR2DS5A0A0G2JLQ3 304 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 A0A0G2JNG1 304 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 A0A1B0GV90 55 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 TMEM82A0PJX8 343 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.7□□□□□ -1.66
CD47-201ENST00000355354 KIR2DS3K7RE56 304 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 ELLP55199 621 aaPredicted RBP4.7□□□□□ -1.66
CD47-201ENST00000355354 GGTLC2Q14390 218 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 KIR2DS5Q14953 304 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 ARHGAP19Q14CB8 494 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 KISS1Q15726 138 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 MPV17LQ2QL34 196 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 TMEM268Q5VZI3 342 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 HIST2H2BCQ6DN03 193 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 GLIPR1L1Q6UWM5 242 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 GDPGP1Q6ZNW5 385 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 LFNGQ8NES3 379 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 VRK1Q99986 396 aaPredicted RBP4.7□□□□□ -1.66
CD47-201ENST00000355354 DNAJC4Q9NNZ3 241 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 MED17Q9NVC6 651 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 TMED7-TICAM2A0A0A6YYA0 188 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 NKX2-6A6NCS4 301 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 WDPCPO95876 746 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 TNFP01375 233 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 IGKV1-5P01602 117 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 OPN1MWP04001 364 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 TK1P04183 234 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 DBIP07108 87 aaKnown RBP4.7□□□□□ -1.66
CD47-201ENST00000355354 QDPRP09417 244 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 OPN1MW2P0DN77 364 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 OPN1MW3P0DN78 364 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 DHODHQ02127 395 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 ROM1Q03395 351 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 ZNF818PQ6ZRF7 136 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 STEAP2Q8NFT2 490 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 CT55Q8WUE5 264 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 OR6C1Q96RD1 312 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 GPR87Q9BY21 358 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 CACFD1Q9UGQ2 172 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 MRPS33Q9Y291 106 aaKnown RBP4.7□□□□□ -1.66
CD47-201ENST00000355354 PKHD1P08F94 4074 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 TRAV1-2A0A0B4J238 106 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 HKR1P10072 659 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 IL32P24001 234 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 SSBP2P81877 361 aaPredicted RBP4.7□□□□□ -1.66
CD47-201ENST00000355354 FABP9Q0Z7S8 132 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 KIR3DS1Q14943 382 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 C1orf140Q5VVS0 124 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 OR2M3Q8NG83 312 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 STOML3Q8TAV4 291 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 CXorf40BQ96DE9 158 aa4.7□□□□□ -1.66
CD47-201ENST00000355354 GPX7Q96SL4 187 aaPredicted RBP4.7□□□□□ -1.66
CD47-201ENST00000355354 MSL2Q9HCI7 577 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms