RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 MRPS15P82914 257 aaKnown RBP13.15□□□□□ -0.3
CTSA-202ENST00000354880 HOXA4Q00056 320 aaPredicted RBP13.15□□□□□ -0.3
CTSA-202ENST00000354880 SMIM21Q3B7S5 101 aa13.15□□□□□ -0.3
CTSA-202ENST00000354880 GCSAMQ8N6F7 178 aa13.15□□□□□ -0.3
CTSA-202ENST00000354880 OCSTAMPQ9BR26 566 aa13.15□□□□□ -0.3
CTSA-202ENST00000354880 SAP30LQ9HAJ7 183 aa13.15□□□□□ -0.3
CTSA-202ENST00000354880 RASL12Q9NYN1 266 aa13.15□□□□□ -0.3
CTSA-202ENST00000354880 ZNF107Q9UII5 783 aaPredicted RBP13.15□□□□□ -0.3
CTSA-202ENST00000354880 AK3Q9UIJ7 227 aa13.15□□□□□ -0.3
CTSA-202ENST00000354880 PPP1R3CQ9UQK1 317 aa13.15□□□□□ -0.3
CTSA-202ENST00000354880 UBE2QL1A1L167 161 aa13.14□□□□□ -0.31
CTSA-202ENST00000354880 SH2D1BO14796 132 aa13.14□□□□□ -0.31
CTSA-202ENST00000354880 DEGS1O15121 323 aa13.14□□□□□ -0.31
CTSA-202ENST00000354880 ZNF44P15621 663 aa13.14□□□□□ -0.31
CTSA-202ENST00000354880 TAS2R19P59542 299 aa13.14□□□□□ -0.31
CTSA-202ENST00000354880 SRSF1Q07955 248 aaKnown RBP eCLIP13.14□□□□□ -0.31
CTSA-202ENST00000354880 Q6P435 159 aa13.14□□□□□ -0.31
CTSA-202ENST00000354880 ENKURQ8TC29 256 aa13.14□□□□□ -0.31
CTSA-202ENST00000354880 Q8TCH9 128 aa13.14□□□□□ -0.31
CTSA-202ENST00000354880 CMSS1Q9BQ75 279 aaKnown RBP13.14□□□□□ -0.31
CTSA-202ENST00000354880 HRASLSQ9HDD0 168 aa13.14□□□□□ -0.31
CTSA-202ENST00000354880 FAIMQ9NVQ4 179 aa13.14□□□□□ -0.31
CTSA-202ENST00000354880 RNF7Q9UBF6 113 aa13.14□□□□□ -0.31
CTSA-202ENST00000354880 GLS2Q9UI32 602 aa13.14□□□□□ -0.31
CTSA-202ENST00000354880 PLEKHA6Q9Y2H5 1048 aa13.14□□□□□ -0.31
CTSA-202ENST00000354880 FAM240BA0A1B0GVZ2 78 aa13.13□□□□□ -0.31
CTSA-202ENST00000354880 A6NNC1 897 aa13.13□□□□□ -0.31
CTSA-202ENST00000354880 MCRIP1C9JLW8 97 aa13.13□□□□□ -0.31
CTSA-202ENST00000354880 HS3ST1O14792 307 aa13.13□□□□□ -0.31
CTSA-202ENST00000354880 OR2H2O95918 312 aa13.13□□□□□ -0.31
CTSA-202ENST00000354880 KNG1P01042 644 aa13.13□□□□□ -0.31
CTSA-202ENST00000354880 LHBP01229 141 aa13.13□□□□□ -0.31
CTSA-202ENST00000354880 MT-ND4P03905 459 aa13.13□□□□□ -0.31
CTSA-202ENST00000354880 RBMXP38159 391 aaKnown RBP13.13□□□□□ -0.31
CTSA-202ENST00000354880 TMEM229BQ8NBD8 167 aa13.13□□□□□ -0.31
CTSA-202ENST00000354880 SUMF2Q8NBJ7 301 aa13.13□□□□□ -0.31
CTSA-202ENST00000354880 OR11L1Q8NGX0 322 aa13.13□□□□□ -0.31
CTSA-202ENST00000354880 OR14J1Q9UGF5 321 aa13.13□□□□□ -0.31
CTSA-202ENST00000354880 ANAPC10Q9UM13 185 aa13.13□□□□□ -0.31
CTSA-202ENST00000354880 NPTNQ9Y639 398 aa13.13□□□□□ -0.31
CTSA-202ENST00000354880 DYSFO75923 2080 aa13.13□□□□□ -0.31
CTSA-202ENST00000354880 LRRK2Q5S007 2527 aa13.13□□□□□ -0.31
CTSA-202ENST00000354880 TRAV24A0A0B4J272 114 aa13.13□□□□□ -0.31
CTSA-202ENST00000354880 A0A1W2PPR1 153 aa13.13□□□□□ -0.31
CTSA-202ENST00000354880 NAP1L6A6NFF2 107 aa13.13□□□□□ -0.31
CTSA-202ENST00000354880 CD3DP04234 171 aa13.13□□□□□ -0.31
CTSA-202ENST00000354880 GLAP06280 429 aa13.13□□□□□ -0.31
CTSA-202ENST00000354880 AKAIN1P0CW23 69 aa13.13□□□□□ -0.31
CTSA-202ENST00000354880 SPNP16150 400 aa13.13□□□□□ -0.31
CTSA-202ENST00000354880 EGR1P18146 543 aa13.13□□□□□ -0.31
CTSA-202ENST00000354880 BTCP35070 178 aa13.13□□□□□ -0.31
CTSA-202ENST00000354880 FAUP35544 74 aaKnown RBP13.13□□□□□ -0.31
CTSA-202ENST00000354880 STEAP1BQ6NZ63 245 aa13.13□□□□□ -0.31
CTSA-202ENST00000354880 CCBE1Q6UXH8 406 aaPredicted RBP13.13□□□□□ -0.31
CTSA-202ENST00000354880 Q6ZNX1 250 aa13.13□□□□□ -0.31
CTSA-202ENST00000354880 FAM90A1Q86YD7 464 aa13.13□□□□□ -0.31
CTSA-202ENST00000354880 OR4S1Q8NGB4 309 aa13.13□□□□□ -0.31
CTSA-202ENST00000354880 DYRK2Q92630 601 aa13.13□□□□□ -0.31
CTSA-202ENST00000354880 RDH5Q92781 318 aa13.13□□□□□ -0.31
CTSA-202ENST00000354880 HDHD3Q9BSH5 251 aaPredicted RBP13.13□□□□□ -0.31
CTSA-202ENST00000354880 DNAJB11Q9UBS4 358 aa13.13□□□□□ -0.31
CTSA-202ENST00000354880 A0A1B0GVG6 124 aa13.12□□□□□ -0.31
CTSA-202ENST00000354880 ZNF736B4DX44 427 aaPredicted RBP13.12□□□□□ -0.31
CTSA-202ENST00000354880 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.12□□□□□ -0.31
CTSA-202ENST00000354880 HSPB6O14558 160 aa13.12□□□□□ -0.31
CTSA-202ENST00000354880 HAND1O96004 215 aa13.12□□□□□ -0.31
CTSA-202ENST00000354880 IRF2P14316 349 aa13.12□□□□□ -0.31
CTSA-202ENST00000354880 NAT1P18440 290 aa13.12□□□□□ -0.31
CTSA-202ENST00000354880 HLA-DMAP28067 261 aa13.12□□□□□ -0.31
CTSA-202ENST00000354880 SLC6A1P30531 599 aa13.12□□□□□ -0.31
CTSA-202ENST00000354880 RBM39Q14498 530 aaKnown RBP13.12□□□□□ -0.31
CTSA-202ENST00000354880 AGAP6Q5VW22 663 aa13.12□□□□□ -0.31
CTSA-202ENST00000354880 OR52W1Q6IF63 320 aa13.12□□□□□ -0.31
CTSA-202ENST00000354880 FAAP20Q6NZ36 180 aa13.12□□□□□ -0.31
CTSA-202ENST00000354880 BOLLQ8N9W6 283 aaKnown RBP13.12□□□□□ -0.31
CTSA-202ENST00000354880 OR4C16Q8NGL9 310 aa13.12□□□□□ -0.31
CTSA-202ENST00000354880 NEK7Q8TDX7 302 aa13.12□□□□□ -0.31
CTSA-202ENST00000354880 HPS1Q92902 700 aa13.12□□□□□ -0.31
CTSA-202ENST00000354880 ST6GALNAC5Q9BVH7 336 aa13.12□□□□□ -0.31
CTSA-202ENST00000354880 DPCDQ9BVM2 203 aaPredicted RBP13.12□□□□□ -0.31
CTSA-202ENST00000354880 CBLN4Q9NTU7 201 aa13.12□□□□□ -0.31
CTSA-202ENST00000354880 ZNF701Q9NV72 531 aaPredicted RBP13.12□□□□□ -0.31
CTSA-202ENST00000354880 MCUBQ9NWR8 336 aa13.12□□□□□ -0.31
CTSA-202ENST00000354880 TREM2Q9NZC2 230 aa13.12□□□□□ -0.31
CTSA-202ENST00000354880 ZNF230Q9UIE0 474 aaPredicted RBP13.12□□□□□ -0.31
CTSA-202ENST00000354880 FBXO9Q9UK97 447 aaPredicted RBP13.12□□□□□ -0.31
CTSA-202ENST00000354880 RFPL4AA6NLU0 287 aa13.11□□□□□ -0.31
CTSA-202ENST00000354880 RFPL4AL1F8VTS6 287 aa13.11□□□□□ -0.31
CTSA-202ENST00000354880 SIRPB1O00241 398 aa13.11□□□□□ -0.31
CTSA-202ENST00000354880 SLC33A1O00400 549 aaPredicted RBP13.11□□□□□ -0.31
CTSA-202ENST00000354880 GOSR1O95249 250 aa13.11□□□□□ -0.31
CTSA-202ENST00000354880 DTYMKP23919 212 aa13.11□□□□□ -0.31
CTSA-202ENST00000354880 PPOXP50336 477 aa13.11□□□□□ -0.31
CTSA-202ENST00000354880 HOGA1Q86XE5 327 aa13.11□□□□□ -0.31
CTSA-202ENST00000354880 BPIFB2Q8N4F0 458 aa13.11□□□□□ -0.31
CTSA-202ENST00000354880 DUSP18Q8NEJ0 188 aa13.11□□□□□ -0.31
CTSA-202ENST00000354880 OR4D10Q8NGI6 311 aa13.11□□□□□ -0.31
CTSA-202ENST00000354880 SNAPC3Q92966 411 aa13.11□□□□□ -0.31
CTSA-202ENST00000354880 C12orf4Q9NQ89 552 aa13.11□□□□□ -0.31
CTSA-202ENST00000354880 NLKQ9UBE8 527 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms