RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 HIST1H2AAQ96QV6 131 aa19.16■□□□□ 0.66
NKX2-1-201ENST00000354822 TAF9BQ9HBM6 251 aa19.16■□□□□ 0.66
NKX2-1-201ENST00000354822 MMP26Q9NRE1 261 aa19.16■□□□□ 0.66
NKX2-1-201ENST00000354822 GALR2O43603 387 aaPredicted RBP19.15■□□□□ 0.66
NKX2-1-201ENST00000354822 JTBO76095 146 aa19.15■□□□□ 0.66
NKX2-1-201ENST00000354822 GAPDHP04406 335 aaKnown RBP19.15■□□□□ 0.66
NKX2-1-201ENST00000354822 HAAOP46952 286 aa19.15■□□□□ 0.66
NKX2-1-201ENST00000354822 DEFA5Q01523 94 aa19.15■□□□□ 0.66
NKX2-1-201ENST00000354822 IL34Q6ZMJ4 242 aa19.15■□□□□ 0.66
NKX2-1-201ENST00000354822 FAM185AQ8N0U4 392 aa19.15■□□□□ 0.66
NKX2-1-201ENST00000354822 MDS2Q8NDY4 140 aa19.15■□□□□ 0.66
NKX2-1-201ENST00000354822 POM121L2Q96KW2 1035 aa19.15■□□□□ 0.66
NKX2-1-201ENST00000354822 IL17BQ9UHF5 180 aa19.15■□□□□ 0.66
NKX2-1-201ENST00000354822 TMEM218A2RU14 115 aa19.15■□□□□ 0.66
NKX2-1-201ENST00000354822 ZNF705EA8MWA4 302 aaPredicted RBP19.15■□□□□ 0.66
NKX2-1-201ENST00000354822 E5RGE8 158 aa19.15■□□□□ 0.66
NKX2-1-201ENST00000354822 H7C1Q1 480 aa19.15■□□□□ 0.66
NKX2-1-201ENST00000354822 CD46P15529 392 aa19.15■□□□□ 0.66
NKX2-1-201ENST00000354822 FOXG1P55316 489 aaPredicted RBP19.15■□□□□ 0.66
NKX2-1-201ENST00000354822 PDCD1Q15116 288 aa19.15■□□□□ 0.66
NKX2-1-201ENST00000354822 MPV17LQ2QL34 196 aa19.15■□□□□ 0.66
NKX2-1-201ENST00000354822 EXTL1Q92935 676 aa19.15■□□□□ 0.66
NKX2-1-201ENST00000354822 C18orf12Q96KH6 178 aa19.15■□□□□ 0.66
NKX2-1-201ENST00000354822 FBXO9Q9UK97 447 aaPredicted RBP19.15■□□□□ 0.66
NKX2-1-201ENST00000354822 NSG2Q9Y328 171 aa19.15■□□□□ 0.66
NKX2-1-201ENST00000354822 CCL2P13500 99 aa19.14■□□□□ 0.65
NKX2-1-201ENST00000354822 BCL3P20749 454 aa19.14■□□□□ 0.65
NKX2-1-201ENST00000354822 GPM6AP51674 278 aa19.14■□□□□ 0.65
NKX2-1-201ENST00000354822 SPEM2Q0P670 501 aa19.14■□□□□ 0.65
NKX2-1-201ENST00000354822 DAZAP2Q15038 168 aaPredicted RBP19.14■□□□□ 0.65
NKX2-1-201ENST00000354822 SP6Q3SY56 376 aa19.14■□□□□ 0.65
NKX2-1-201ENST00000354822 LRP3O75074 770 aa19.13■□□□□ 0.65
NKX2-1-201ENST00000354822 PHLDA2Q53GA4 152 aa19.13■□□□□ 0.65
NKX2-1-201ENST00000354822 RPL7L1Q6DKI1 246 aaKnown RBP19.13■□□□□ 0.65
NKX2-1-201ENST00000354822 ZFP62Q8NB50 900 aaPredicted RBP19.13■□□□□ 0.65
NKX2-1-201ENST00000354822 HPSE2Q8WWQ2 592 aa19.13■□□□□ 0.65
NKX2-1-201ENST00000354822 SMIM8Q96KF7 97 aa19.13■□□□□ 0.65
NKX2-1-201ENST00000354822 LSM5Q9Y4Y9 91 aaKnown RBP19.13■□□□□ 0.65
NKX2-1-201ENST00000354822 ZNF732B4DXR9 585 aa19.13■□□□□ 0.65
NKX2-1-201ENST00000354822 TRAPPC2LH3BP13 241 aa19.13■□□□□ 0.65
NKX2-1-201ENST00000354822 PPYP01298 95 aa19.13■□□□□ 0.65
NKX2-1-201ENST00000354822 AADACP22760 399 aa19.13■□□□□ 0.65
NKX2-1-201ENST00000354822 DUSP1P28562 367 aa19.13■□□□□ 0.65
NKX2-1-201ENST00000354822 BOLLQ8N9W6 283 aaKnown RBP19.13■□□□□ 0.65
NKX2-1-201ENST00000354822 GLYATL2Q8WU03 294 aa19.13■□□□□ 0.65
NKX2-1-201ENST00000354822 SLAMF9Q96A28 289 aa19.13■□□□□ 0.65
NKX2-1-201ENST00000354822 MSI2Q96DH6 328 aaKnown RBP19.13■□□□□ 0.65
NKX2-1-201ENST00000354822 PLK3Q9H4B4 646 aa19.13■□□□□ 0.65
NKX2-1-201ENST00000354822 BDP1A6H8Y1 2624 aa19.12■□□□□ 0.65
NKX2-1-201ENST00000354822 ZNF503-AS2A6NEH8 195 aa19.12■□□□□ 0.65
NKX2-1-201ENST00000354822 ATG12O94817 140 aa19.12■□□□□ 0.65
NKX2-1-201ENST00000354822 ZNF205O95201 554 aa19.12■□□□□ 0.65
NKX2-1-201ENST00000354822 SRPXP78539 464 aa19.12■□□□□ 0.65
NKX2-1-201ENST00000354822 NUFIP2Q7Z417 695 aaKnown RBP19.12■□□□□ 0.65
NKX2-1-201ENST00000354822 RCC2Q9P258 522 aaKnown RBP19.12■□□□□ 0.65
NKX2-1-201ENST00000354822 TMED3Q9Y3Q3 217 aa19.12■□□□□ 0.65
NKX2-1-201ENST00000354822 AHCTF1Q8WYP5 2266 aa19.12■□□□□ 0.65
NKX2-1-201ENST00000354822 DIRAS3O95661 229 aa19.12■□□□□ 0.65
NKX2-1-201ENST00000354822 APLNRP35414 380 aa19.12■□□□□ 0.65
NKX2-1-201ENST00000354822 OR2A2Q6IF42 318 aa19.12■□□□□ 0.65
NKX2-1-201ENST00000354822 ATRAIDQ6UW56 229 aa19.12■□□□□ 0.65
NKX2-1-201ENST00000354822 Q6ZPA2 131 aa19.12■□□□□ 0.65
NKX2-1-201ENST00000354822 LYZL2Q7Z4W2 148 aa19.12■□□□□ 0.65
NKX2-1-201ENST00000354822 LINC00596Q86U02 117 aa19.12■□□□□ 0.65
NKX2-1-201ENST00000354822 IL22RA1Q8N6P7 574 aa19.12■□□□□ 0.65
NKX2-1-201ENST00000354822 OR5T2Q8NGG2 359 aa19.12■□□□□ 0.65
NKX2-1-201ENST00000354822 OR5L1Q8NGL2 311 aa19.12■□□□□ 0.65
NKX2-1-201ENST00000354822 Q9N2K0 584 aa19.12■□□□□ 0.65
NKX2-1-201ENST00000354822 MPC1Q9Y5U8 109 aa19.12■□□□□ 0.65
NKX2-1-201ENST00000354822 CD300LBA8K4G0 201 aa19.11■□□□□ 0.65
NKX2-1-201ENST00000354822 NAPSAO96009 420 aa19.11■□□□□ 0.65
NKX2-1-201ENST00000354822 MBPP02686 304 aaPredicted RBP19.11■□□□□ 0.65
NKX2-1-201ENST00000354822 ATF4P18848 351 aaPredicted RBP19.11■□□□□ 0.65
NKX2-1-201ENST00000354822 TMEM33P57088 247 aa19.11■□□□□ 0.65
NKX2-1-201ENST00000354822 BLOC1S1P78537 153 aa19.11■□□□□ 0.65
NKX2-1-201ENST00000354822 PJVKQ0ZLH3 352 aa19.11■□□□□ 0.65
NKX2-1-201ENST00000354822 TRIP6Q15654 476 aaKnown RBP19.11■□□□□ 0.65
NKX2-1-201ENST00000354822 GPR157Q5UAW9 335 aa19.11■□□□□ 0.65
NKX2-1-201ENST00000354822 FAM219AQ8IW50 185 aa19.11■□□□□ 0.65
NKX2-1-201ENST00000354822 NKX6-2Q9C056 277 aaPredicted RBP19.11■□□□□ 0.65
NKX2-1-201ENST00000354822 FGF23Q9GZV9 251 aaPredicted RBP19.11■□□□□ 0.65
NKX2-1-201ENST00000354822 SPACA1Q9HBV2 294 aa19.11■□□□□ 0.65
NKX2-1-201ENST00000354822 GP6Q9HCN6 339 aa19.11■□□□□ 0.65
NKX2-1-201ENST00000354822 SCGB1D2O95969 90 aa19.1■□□□□ 0.65
NKX2-1-201ENST00000354822 NGFP01138 241 aa19.1■□□□□ 0.65
NKX2-1-201ENST00000354822 TK1P04183 234 aa19.1■□□□□ 0.65
NKX2-1-201ENST00000354822 CTXN2P0C2S0 81 aa19.1■□□□□ 0.65
NKX2-1-201ENST00000354822 SVBPQ8N300 66 aa19.1■□□□□ 0.65
NKX2-1-201ENST00000354822 NANOS1Q8WY41 292 aaKnown RBP19.1■□□□□ 0.65
NKX2-1-201ENST00000354822 RIMS4Q9H426 269 aaPredicted RBP19.1■□□□□ 0.65
NKX2-1-201ENST00000354822 MTCH1Q9NZJ7 389 aa19.1■□□□□ 0.65
NKX2-1-201ENST00000354822 AMDHD2Q9Y303 409 aa19.1■□□□□ 0.65
NKX2-1-201ENST00000354822 TNRC6AQ8NDV7 1962 aaKnown RBP19.1■□□□□ 0.65
NKX2-1-201ENST00000354822 FREM1Q5H8C1 2179 aa19.1■□□□□ 0.65
NKX2-1-201ENST00000354822 ANKRD30BLA7E2S9 258 aa19.1■□□□□ 0.65
NKX2-1-201ENST00000354822 MPPED1O15442 326 aa19.1■□□□□ 0.65
NKX2-1-201ENST00000354822 PHF1O43189 567 aaPredicted RBP19.1■□□□□ 0.65
NKX2-1-201ENST00000354822 SULT1A2P50226 295 aa19.1■□□□□ 0.65
NKX2-1-201ENST00000354822 MST1LQ2TV78 715 aa19.1■□□□□ 0.65
NKX2-1-201ENST00000354822 TMEM268Q5VZI3 342 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms