RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 NXF2Q9GZY0 626 aaKnown RBP1.14□□□□□ -2.23
BRCA1-202ENST00000354071 SDHAF3Q9NRP4 125 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 CA10Q9NS85 328 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 TREX1Q9NSU2 369 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 EMC3Q9P0I2 261 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 RBM12B-AS1Q9P1G2 102 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 UVRAGQ9P2Y5 699 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 SHPKQ9UHJ6 478 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 CD84Q9UIB8 345 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 RAB23Q9ULC3 237 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 FARSAQ9Y285 508 aaKnown RBP1.14□□□□□ -2.23
BRCA1-202ENST00000354071 SIGLEC9Q9Y336 463 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.14□□□□□ -2.23
BRCA1-202ENST00000354071 NCOA2Q15596 1464 aa1.14□□□□□ -2.23
BRCA1-202ENST00000354071 IGKV6-21A0A0C4DH24 114 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 RBFOX3A6NFN3 312 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 GJE1A6NN92 205 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 H0Y9J4 135 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 PANO1I0J062 215 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 M0R1B8 84 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 GNGT2O14610 69 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 ATP5HO75947 161 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 GAS8-AS1O95177 125 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 TLX1NBP0CAT3 122 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 LIMS3P0CW19 117 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 LIMS4P0CW20 117 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 PET100P0DJ07 73 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 SERPINB1P30740 379 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 SERPINB10P48595 397 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 DEFA1P59665 94 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 DEFA3P59666 94 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 RPL23P62829 140 aaKnown RBP1.13□□□□□ -2.23
BRCA1-202ENST00000354071 RPL18AQ02543 176 aaKnown RBP1.13□□□□□ -2.23
BRCA1-202ENST00000354071 N4BP2L1Q5TBK1 243 aaPredicted RBP1.13□□□□□ -2.23
BRCA1-202ENST00000354071 KCTD16Q68DU8 428 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 CLEC6AQ6EIG7 209 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 COX15Q7KZN9 410 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 CRLF3Q8IUI8 442 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 CA13Q8N1Q1 262 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 LINC00337Q8N6G1 96 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 WDSUB1Q8N9V3 476 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 CCDC54Q8NEL0 328 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 OR6Q1Q8NGQ2 317 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 OR2K2Q8NGT1 345 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 OR6K2Q8NGY2 324 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 C17orf50Q8WW18 174 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 FMC1Q96HJ9 113 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 KCNS1Q96KK3 526 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 CNBD2Q96M20 576 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 Q96MT0 163 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 PDCD1LG2Q9BQ51 273 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 TMEM27Q9HBJ8 222 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 GID8Q9NWU2 228 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 VNN3Q9NY84 501 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF226Q9NYT6 803 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF282Q9UDV7 671 aaPredicted RBP1.13□□□□□ -2.23
BRCA1-202ENST00000354071 PRELID1Q9Y255 219 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 SIGLEC7Q9Y286 467 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 A0A1B0GUL6 1792 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 ADAMTS13Q76LX8 1427 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 SCAPERQ9BY12 1400 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 F8VZ95 297 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 H3BNH8 94 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 GOLGA8MH3BSY2 632 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 PLPP3O14495 311 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 SLC31A2O15432 143 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 FGF16O43320 207 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF861PO60384 105 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 SERF1AO75920 110 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF19P17023 458 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 RGS6P49758 472 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 PPOXP50336 477 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 P2RY4P51582 365 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 AKR1D1P51857 326 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 MYL5Q02045 173 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 SMARCB1Q12824 385 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 MAPRE2Q15555 327 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 NDUFA5Q16718 116 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 CEACAM16Q2WEN9 425 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 CASC10Q5T4H9 136 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 LCE1EQ5T753 118 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 USP50Q70EL3 339 aaPredicted RBP1.13□□□□□ -2.23
BRCA1-202ENST00000354071 STX12Q86Y82 276 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 UBL4BQ8N7F7 174 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 CCNYL1Q8N7R7 359 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 OR1N2Q8NGR9 330 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 ZFP90Q8TF47 636 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 OR2M2Q96R28 347 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 SERPINI1Q99574 410 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 SLC25A2Q9BXI2 301 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 FGF23Q9GZV9 251 aaPredicted RBP1.13□□□□□ -2.23
BRCA1-202ENST00000354071 ASCL3Q9NQ33 180 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 FGFR1OP2Q9NVK5 253 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 TRMT112Q9UI30 125 aaKnown RBP1.13□□□□□ -2.23
BRCA1-202ENST00000354071 ABCC6O95255 1503 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 A6NDX4 124 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 H7C2Y5 167 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 SS18L1O75177 396 aaPredicted RBP1.13□□□□□ -2.23
BRCA1-202ENST00000354071 IGLV2-8P01709 118 aa1.13□□□□□ -2.23
BRCA1-202ENST00000354071 BGLAPP02818 100 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms