RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 TEX36Q5VZQ5 186 aa16.87■□□□□ 0.29
SIGMAR1-202ENST00000353468 Q8N402 240 aa16.87■□□□□ 0.29
SIGMAR1-202ENST00000353468 CYYR1Q96J86 154 aa16.87■□□□□ 0.29
SIGMAR1-202ENST00000353468 SPACA1Q9HBV2 294 aa16.87■□□□□ 0.29
SIGMAR1-202ENST00000353468 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.87■□□□□ 0.29
SIGMAR1-202ENST00000353468 RCC2Q9P258 522 aaKnown RBP16.87■□□□□ 0.29
SIGMAR1-202ENST00000353468 PLEKHA6Q9Y2H5 1048 aa16.87■□□□□ 0.29
SIGMAR1-202ENST00000353468 USP9YO00507 2555 aaPredicted RBP16.86■□□□□ 0.29
SIGMAR1-202ENST00000353468 PPIAL4EA0A075B759 164 aa16.86■□□□□ 0.29
SIGMAR1-202ENST00000353468 OOEPA6NGQ2 149 aa16.86■□□□□ 0.29
SIGMAR1-202ENST00000353468 PPIAL4DF5H284 164 aa16.86■□□□□ 0.29
SIGMAR1-202ENST00000353468 NDUFS7O75251 213 aa16.86■□□□□ 0.29
SIGMAR1-202ENST00000353468 F12P00748 615 aaPredicted RBP16.86■□□□□ 0.29
SIGMAR1-202ENST00000353468 PPIAL4FP0DN26 164 aa16.86■□□□□ 0.29
SIGMAR1-202ENST00000353468 DAOP14920 347 aa16.86■□□□□ 0.29
SIGMAR1-202ENST00000353468 MUC1P15941 1255 aaPredicted RBP16.86■□□□□ 0.29
SIGMAR1-202ENST00000353468 CEBPDP49716 269 aaPredicted RBP16.86■□□□□ 0.29
SIGMAR1-202ENST00000353468 MRPS10P82664 201 aaKnown RBP16.86■□□□□ 0.29
SIGMAR1-202ENST00000353468 BRICD5Q6PL45 260 aa16.86■□□□□ 0.29
SIGMAR1-202ENST00000353468 DEFB108BQ8NET1 73 aa16.86■□□□□ 0.29
SIGMAR1-202ENST00000353468 FAAP24Q9BTP7 215 aa16.86■□□□□ 0.29
SIGMAR1-202ENST00000353468 LIME1Q9H400 295 aa16.86■□□□□ 0.29
SIGMAR1-202ENST00000353468 CXorf56Q9H5V9 222 aa16.86■□□□□ 0.29
SIGMAR1-202ENST00000353468 SEBOXQ9HB31 216 aaPredicted RBP16.86■□□□□ 0.29
SIGMAR1-202ENST00000353468 PPIAL4AQ9Y536 164 aa16.86■□□□□ 0.29
SIGMAR1-202ENST00000353468 TENM4Q6N022 2769 aa16.86■□□□□ 0.29
SIGMAR1-202ENST00000353468 LRBAP50851 2863 aa16.86■□□□□ 0.29
SIGMAR1-202ENST00000353468 TRAV24A0A0B4J272 114 aa16.85■□□□□ 0.29
SIGMAR1-202ENST00000353468 GABARAPH6UMI1 98 aa16.85■□□□□ 0.29
SIGMAR1-202ENST00000353468 LGALS8O00214 317 aa16.85■□□□□ 0.29
SIGMAR1-202ENST00000353468 RP2O75695 350 aa16.85■□□□□ 0.29
SIGMAR1-202ENST00000353468 PRDX2P32119 198 aa16.85■□□□□ 0.29
SIGMAR1-202ENST00000353468 PRSS3P35030 304 aa16.85■□□□□ 0.29
SIGMAR1-202ENST00000353468 EFNA4P52798 201 aa16.85■□□□□ 0.29
SIGMAR1-202ENST00000353468 PNLIPRP3Q17RR3 467 aa16.85■□□□□ 0.29
SIGMAR1-202ENST00000353468 OLFML2AQ68BL7 652 aa16.85■□□□□ 0.29
SIGMAR1-202ENST00000353468 ZNF787Q6DD87 383 aa16.85■□□□□ 0.29
SIGMAR1-202ENST00000353468 CD177Q8N6Q3 437 aa16.85■□□□□ 0.29
SIGMAR1-202ENST00000353468 ST8SIA4Q92187 359 aa16.85■□□□□ 0.29
SIGMAR1-202ENST00000353468 BORCS5Q969J3 196 aa16.85■□□□□ 0.29
SIGMAR1-202ENST00000353468 SULT4A1Q9BR01 284 aa16.85■□□□□ 0.29
SIGMAR1-202ENST00000353468 CCDC32Q9BV29 185 aa16.85■□□□□ 0.29
SIGMAR1-202ENST00000353468 USF3Q68DE3 2245 aa16.85■□□□□ 0.29
SIGMAR1-202ENST00000353468 HELZ2Q9BYK8 2649 aaKnown RBP16.85■□□□□ 0.29
SIGMAR1-202ENST00000353468 DCHS2Q6V1P9 2916 aa16.85■□□□□ 0.29
SIGMAR1-202ENST00000353468 IGKV1D-17A0A075B6S4 117 aa16.85■□□□□ 0.29
SIGMAR1-202ENST00000353468 TRAV38-1A0A0B4J264 116 aa16.85■□□□□ 0.29
SIGMAR1-202ENST00000353468 MEIOCA2RUB1 952 aa16.85■□□□□ 0.29
SIGMAR1-202ENST00000353468 SERPINE3A8MV23 424 aa16.85■□□□□ 0.29
SIGMAR1-202ENST00000353468 SIRPB1O00241 398 aa16.85■□□□□ 0.29
SIGMAR1-202ENST00000353468 LMO1P25800 156 aa16.85■□□□□ 0.29
SIGMAR1-202ENST00000353468 DGCR2P98153 550 aa16.85■□□□□ 0.29
SIGMAR1-202ENST00000353468 BAK1Q16611 211 aa16.85■□□□□ 0.29
SIGMAR1-202ENST00000353468 RNASE12Q5GAN4 147 aaKnown RBP16.85■□□□□ 0.29
SIGMAR1-202ENST00000353468 HACD4Q5VWC8 232 aa16.85■□□□□ 0.29
SIGMAR1-202ENST00000353468 HIST2H2BCQ6DN03 193 aa16.85■□□□□ 0.29
SIGMAR1-202ENST00000353468 OR8H2Q8N162 312 aa16.85■□□□□ 0.29
SIGMAR1-202ENST00000353468 SUMF2Q8NBJ7 301 aa16.85■□□□□ 0.29
SIGMAR1-202ENST00000353468 ANGPTL6Q8NI99 470 aa16.85■□□□□ 0.29
SIGMAR1-202ENST00000353468 SMIM4Q8WVI0 70 aa16.85■□□□□ 0.29
SIGMAR1-202ENST00000353468 UBE2QL1A1L167 161 aa16.84■□□□□ 0.29
SIGMAR1-202ENST00000353468 MCRIP1C9JLW8 97 aa16.84■□□□□ 0.29
SIGMAR1-202ENST00000353468 SULT1C2O00338 296 aa16.84■□□□□ 0.29
SIGMAR1-202ENST00000353468 SLC33A1O00400 549 aaPredicted RBP16.84■□□□□ 0.29
SIGMAR1-202ENST00000353468 GSTZ1O43708 216 aaPredicted RBP16.84■□□□□ 0.29
SIGMAR1-202ENST00000353468 TFF1P04155 84 aa16.84■□□□□ 0.29
SIGMAR1-202ENST00000353468 GLAP06280 429 aa16.84■□□□□ 0.29
SIGMAR1-202ENST00000353468 GABRA2P47869 451 aa16.84■□□□□ 0.29
SIGMAR1-202ENST00000353468 GUCA2AQ02747 115 aa16.84■□□□□ 0.29
SIGMAR1-202ENST00000353468 ARFRP1Q13795 201 aa16.84■□□□□ 0.29
SIGMAR1-202ENST00000353468 STUMQ69YW2 141 aa16.84■□□□□ 0.29
SIGMAR1-202ENST00000353468 OR52I2Q8NH67 350 aa16.84■□□□□ 0.29
SIGMAR1-202ENST00000353468 FCAMRQ8WWV6 532 aa16.84■□□□□ 0.29
SIGMAR1-202ENST00000353468 NRGNQ92686 78 aa16.84■□□□□ 0.29
SIGMAR1-202ENST00000353468 THAP7Q9BT49 309 aaPredicted RBP16.84■□□□□ 0.29
SIGMAR1-202ENST00000353468 DPCDQ9BVM2 203 aaPredicted RBP16.84■□□□□ 0.29
SIGMAR1-202ENST00000353468 AKAP6Q13023 2319 aa16.83■□□□□ 0.29
SIGMAR1-202ENST00000353468 HSPB6O14558 160 aa16.83■□□□□ 0.28
SIGMAR1-202ENST00000353468 CSF3P09919 207 aa16.83■□□□□ 0.28
SIGMAR1-202ENST00000353468 GNG2P59768 71 aa16.83■□□□□ 0.28
SIGMAR1-202ENST00000353468 COL10A1Q03692 680 aa16.83■□□□□ 0.28
SIGMAR1-202ENST00000353468 DNM1P46Q6ZS02 220 aa16.83■□□□□ 0.28
SIGMAR1-202ENST00000353468 BPIFB2Q8N4F0 458 aa16.83■□□□□ 0.28
SIGMAR1-202ENST00000353468 GPX8Q8TED1 209 aa16.83■□□□□ 0.28
SIGMAR1-202ENST00000353468 NUDCD2Q8WVJ2 157 aa16.83■□□□□ 0.28
SIGMAR1-202ENST00000353468 SCPEP1Q9HB40 452 aa16.83■□□□□ 0.28
SIGMAR1-202ENST00000353468 METRNQ9UJH8 293 aa16.83■□□□□ 0.28
SIGMAR1-202ENST00000353468 ZNF222Q9UK12 451 aa16.83■□□□□ 0.28
SIGMAR1-202ENST00000353468 UTP20O75691 2785 aaKnown RBP16.82■□□□□ 0.28
SIGMAR1-202ENST00000353468 CA11O75493 328 aa16.82■□□□□ 0.28
SIGMAR1-202ENST00000353468 GYPAP02724 150 aa16.82■□□□□ 0.28
SIGMAR1-202ENST00000353468 CD3GP09693 182 aa16.82■□□□□ 0.28
SIGMAR1-202ENST00000353468 AMY2BP19961 511 aa16.82■□□□□ 0.28
SIGMAR1-202ENST00000353468 RBM39Q14498 530 aaKnown RBP16.82■□□□□ 0.28
SIGMAR1-202ENST00000353468 PAN3Q58A45 887 aaKnown RBP16.82■□□□□ 0.28
SIGMAR1-202ENST00000353468 PEG10Q86TG7 708 aaKnown RBP16.82■□□□□ 0.28
SIGMAR1-202ENST00000353468 NEK7Q8TDX7 302 aa16.82■□□□□ 0.28
SIGMAR1-202ENST00000353468 CHODLQ9H9P2 273 aa16.82■□□□□ 0.28
SIGMAR1-202ENST00000353468 ABCB10Q9NRK6 738 aa16.82■□□□□ 0.28
SIGMAR1-202ENST00000353468 AK3Q9UIJ7 227 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms