RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 IL11RAQ14626 422 aa21.19■□□□□ 0.98
CPNE1-202ENST00000352393 LFNGQ8NES3 379 aa21.19■□□□□ 0.98
CPNE1-202ENST00000352393 C20orf24Q9BUV8 137 aa21.19■□□□□ 0.98
CPNE1-202ENST00000352393 OR2H1Q9GZK4 316 aa21.19■□□□□ 0.98
CPNE1-202ENST00000352393 SLC35B3Q9H1N7 401 aa21.19■□□□□ 0.98
CPNE1-202ENST00000352393 SLC7A11Q9UPY5 501 aa21.19■□□□□ 0.98
CPNE1-202ENST00000352393 NCKAP5O14513 1909 aa21.18■□□□□ 0.98
CPNE1-202ENST00000352393 CDS2O95674 445 aa21.18■□□□□ 0.98
CPNE1-202ENST00000352393 PPP1CCP36873 323 aaKnown RBP21.18■□□□□ 0.98
CPNE1-202ENST00000352393 MLF1P58340 268 aa21.18■□□□□ 0.98
CPNE1-202ENST00000352393 PLCXD3Q63HM9 321 aa21.18■□□□□ 0.98
CPNE1-202ENST00000352393 TMEM182Q6ZP80 229 aaPredicted RBP21.18■□□□□ 0.98
CPNE1-202ENST00000352393 GGNQ86UU5 652 aa21.18■□□□□ 0.98
CPNE1-202ENST00000352393 RPS19BP1Q86WX3 136 aaKnown RBP21.18■□□□□ 0.98
CPNE1-202ENST00000352393 A0A1W2PPE3 182 aa21.17■□□□□ 0.98
CPNE1-202ENST00000352393 DAOP14920 347 aa21.17■□□□□ 0.98
CPNE1-202ENST00000352393 SRPXP78539 464 aa21.17■□□□□ 0.98
CPNE1-202ENST00000352393 GNMTQ14749 295 aa21.17■□□□□ 0.98
CPNE1-202ENST00000352393 PDCD1Q15116 288 aa21.17■□□□□ 0.98
CPNE1-202ENST00000352393 ZNF468Q5VIY5 522 aaPredicted RBP21.17■□□□□ 0.98
CPNE1-202ENST00000352393 MEX3BQ6ZN04 569 aaKnown RBP21.17■□□□□ 0.98
CPNE1-202ENST00000352393 MR1Q95460 341 aa21.17■□□□□ 0.98
CPNE1-202ENST00000352393 FBXO7Q9Y3I1 522 aa21.17■□□□□ 0.98
CPNE1-202ENST00000352393 C3orf85A0A1B0GTC6 90 aa21.17■□□□□ 0.98
CPNE1-202ENST00000352393 MPPED1O15442 326 aa21.17■□□□□ 0.98
CPNE1-202ENST00000352393 RAB5AP20339 215 aa21.17■□□□□ 0.98
CPNE1-202ENST00000352393 FUT3P21217 361 aa21.17■□□□□ 0.98
CPNE1-202ENST00000352393 NOVA1P51513 510 aaKnown RBP21.17■□□□□ 0.98
CPNE1-202ENST00000352393 OR1J1Q8NGS3 322 aa21.17■□□□□ 0.98
CPNE1-202ENST00000352393 FGFBP3Q8TAT2 258 aa21.17■□□□□ 0.98
CPNE1-202ENST00000352393 FAM213BQ8TBF2 198 aa21.17■□□□□ 0.98
CPNE1-202ENST00000352393 NAT6Q93015 286 aa21.17■□□□□ 0.98
CPNE1-202ENST00000352393 FOXB1Q99853 325 aa21.17■□□□□ 0.98
CPNE1-202ENST00000352393 FSCN3Q9NQT6 498 aa21.17■□□□□ 0.98
CPNE1-202ENST00000352393 ZNF816-ZNF321PA0A0X1KG74 233 aa21.16■□□□□ 0.98
CPNE1-202ENST00000352393 TRDCB7Z8K6 153 aa21.16■□□□□ 0.98
CPNE1-202ENST00000352393 S100A6P06703 90 aa21.16■□□□□ 0.98
CPNE1-202ENST00000352393 SRD5A2P31213 254 aa21.16■□□□□ 0.98
CPNE1-202ENST00000352393 CXCL12P48061 93 aa21.16■□□□□ 0.98
CPNE1-202ENST00000352393 SULT1A1P50225 295 aa21.16■□□□□ 0.98
CPNE1-202ENST00000352393 TRIM61Q5EBN2 209 aa21.16■□□□□ 0.98
CPNE1-202ENST00000352393 KRBOX4Q5JUW0 171 aa21.16■□□□□ 0.98
CPNE1-202ENST00000352393 ABLIM2Q6H8Q1 611 aa21.16■□□□□ 0.98
CPNE1-202ENST00000352393 RBMS3Q6XE24 437 aaKnown RBP21.16■□□□□ 0.98
CPNE1-202ENST00000352393 AAED1Q7RTV5 226 aa21.16■□□□□ 0.98
CPNE1-202ENST00000352393 FAM185AQ8N0U4 392 aa21.16■□□□□ 0.98
CPNE1-202ENST00000352393 OR2C3Q8N628 320 aa21.16■□□□□ 0.98
CPNE1-202ENST00000352393 LILRB1Q8NHL6 650 aaPredicted RBP21.16■□□□□ 0.98
CPNE1-202ENST00000352393 TECTBQ96PL2 329 aa21.16■□□□□ 0.98
CPNE1-202ENST00000352393 TMEM222Q9H0R3 208 aa21.16■□□□□ 0.98
CPNE1-202ENST00000352393 KCNJ16Q9NPI9 418 aa21.16■□□□□ 0.98
CPNE1-202ENST00000352393 PLSCR2Q9NRY7 297 aa21.16■□□□□ 0.98
CPNE1-202ENST00000352393 SDK2Q58EX2 2172 aa21.16■□□□□ 0.98
CPNE1-202ENST00000352393 A0A0G2JMM0 328 aa21.16■□□□□ 0.98
CPNE1-202ENST00000352393 A0A1W2PPB8 328 aa21.16■□□□□ 0.98
CPNE1-202ENST00000352393 A0A1W2PRS3 328 aa21.16■□□□□ 0.98
CPNE1-202ENST00000352393 NKX2-6A6NCS4 301 aa21.16■□□□□ 0.98
CPNE1-202ENST00000352393 KIR3DP1A8MWS1 328 aa21.16■□□□□ 0.98
CPNE1-202ENST00000352393 LYSMD4Q5XG99 296 aa21.16■□□□□ 0.98
CPNE1-202ENST00000352393 AGBL5Q8NDL9 886 aa21.16■□□□□ 0.98
CPNE1-202ENST00000352393 ZNF442Q9H7R0 627 aa21.16■□□□□ 0.98
CPNE1-202ENST00000352393 METTL1Q9UBP6 276 aaKnown RBP21.16■□□□□ 0.98
CPNE1-202ENST00000352393 WNT16Q9UBV4 365 aa21.16■□□□□ 0.98
CPNE1-202ENST00000352393 TNRC6BQ9UPQ9 1833 aaKnown RBP21.15■□□□□ 0.98
CPNE1-202ENST00000352393 WDR87Q6ZQQ6 2873 aa21.15■□□□□ 0.98
CPNE1-202ENST00000352393 hCG_1809904A0A1W2PP81 198 aa21.15■□□□□ 0.98
CPNE1-202ENST00000352393 A0A1W2PR64 198 aa21.15■□□□□ 0.98
CPNE1-202ENST00000352393 A0A1W2PRV1 198 aa21.15■□□□□ 0.98
CPNE1-202ENST00000352393 MED19A0JLT2 244 aaPredicted RBP21.15■□□□□ 0.98
CPNE1-202ENST00000352393 IGSF23A1L1A6 192 aa21.15■□□□□ 0.98
CPNE1-202ENST00000352393 PITX3O75364 302 aa21.15■□□□□ 0.98
CPNE1-202ENST00000352393 KLK3P07288 261 aaPredicted RBP21.15■□□□□ 0.98
CPNE1-202ENST00000352393 EDN3P14138 238 aa21.15■□□□□ 0.98
CPNE1-202ENST00000352393 CBR1P16152 277 aa21.15■□□□□ 0.98
CPNE1-202ENST00000352393 YRDCQ86U90 279 aaKnown RBP21.15■□□□□ 0.98
CPNE1-202ENST00000352393 CALHM1Q8IU99 346 aa21.15■□□□□ 0.98
CPNE1-202ENST00000352393 KCNE4Q8WWG9 221 aa21.15■□□□□ 0.98
CPNE1-202ENST00000352393 PIGCQ92535 297 aa21.15■□□□□ 0.98
CPNE1-202ENST00000352393 CLDN23Q96B33 292 aa21.15■□□□□ 0.98
CPNE1-202ENST00000352393 MALSU1Q96EH3 234 aa21.15■□□□□ 0.98
CPNE1-202ENST00000352393 ASCL1P50553 236 aa21.14■□□□□ 0.98
CPNE1-202ENST00000352393 CARD18P57730 90 aa21.14■□□□□ 0.98
CPNE1-202ENST00000352393 CLINT1Q14677 625 aa21.14■□□□□ 0.98
CPNE1-202ENST00000352393 CEACAM16Q2WEN9 425 aa21.14■□□□□ 0.98
CPNE1-202ENST00000352393 IGSF11Q5DX21 431 aa21.14■□□□□ 0.98
CPNE1-202ENST00000352393 CDCP2Q5VXM1 449 aa21.14■□□□□ 0.98
CPNE1-202ENST00000352393 SEBOXQ9HB31 216 aaPredicted RBP21.14■□□□□ 0.98
CPNE1-202ENST00000352393 FAM24AA6NFZ4 105 aa21.14■□□□□ 0.97
CPNE1-202ENST00000352393 C9J4A7 227 aa21.14■□□□□ 0.97
CPNE1-202ENST00000352393 ZNF14P17017 642 aaPredicted RBP21.14■□□□□ 0.97
CPNE1-202ENST00000352393 RIPPLY2Q5TAB7 128 aa21.14■□□□□ 0.97
CPNE1-202ENST00000352393 Q6ZS49 121 aa21.14■□□□□ 0.97
CPNE1-202ENST00000352393 ZNF611Q8N823 705 aa21.14■□□□□ 0.97
CPNE1-202ENST00000352393 NANPQ8TBE9 248 aa21.14■□□□□ 0.97
CPNE1-202ENST00000352393 CD300LFQ8TDQ1 290 aa21.14■□□□□ 0.97
CPNE1-202ENST00000352393 POM121Q96HA1 1249 aa21.14■□□□□ 0.97
CPNE1-202ENST00000352393 TMEM56Q96MV1 263 aa21.14■□□□□ 0.97
CPNE1-202ENST00000352393 SMDT1Q9H4I9 107 aa21.14■□□□□ 0.97
CPNE1-202ENST00000352393 P4HTMQ9NXG6 502 aa21.14■□□□□ 0.97
CPNE1-202ENST00000352393 TMEM56-RWDD3S4R434 201 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms