RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 ZNF69Q9UC07 566 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 ZNF230Q9UIE0 474 aaPredicted RBP7.91□□□□□ -1.14
ATG4A-202ENST00000345734 U3KQ87 197 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 CD300LBA8K4G0 201 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 VSTM5A8MXK1 200 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 FABP7O15540 132 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 PSPNO60542 156 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 TNFSF13O75888 250 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 TOXO94900 526 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 CSTBP04080 98 aaKnown RBP7.91□□□□□ -1.14
ATG4A-202ENST00000345734 IL5P05113 134 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 SFTPBP07988 381 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 FAM189A2Q15884 450 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 TAF9Q16594 264 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 RNASE10Q5GAN6 216 aaKnown RBP7.91□□□□□ -1.14
ATG4A-202ENST00000345734 OR2A2Q6IF42 318 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 ZNF610Q8N9Z0 462 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 OR51F2Q8NH61 342 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 MAFIPQ8WZ33 124 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 GTF3AQ92664 365 aaKnown RBP7.91□□□□□ -1.14
ATG4A-202ENST00000345734 MRGPRFQ96AM1 343 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 STARD4Q96DR4 205 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 CPNE2Q96FN4 548 aaPredicted RBP7.91□□□□□ -1.14
ATG4A-202ENST00000345734 OPN3Q9H1Y3 402 aaPredicted RBP7.91□□□□□ -1.14
ATG4A-202ENST00000345734 OR51M1Q9H341 326 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 GSN-AS1Q9NRJ2 163 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 ANAPC10Q9UM13 185 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 ATP23Q9Y6H3 246 aa7.91□□□□□ -1.14
ATG4A-202ENST00000345734 TLN1Q9Y490 2541 aaKnown RBP7.91□□□□□ -1.14
ATG4A-202ENST00000345734 MEIKINA0A087WXM9 373 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 RPS10-NUDT3A0A1W2PQS6 291 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 FAM90A27PA6NNH2 459 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 DISC1C4P0D8 188 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 MKRN2OSH3BPM6 223 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 AGFG2O95081 481 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 CST4P01036 141 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 COX5AP20674 150 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 GPM6AP51674 278 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 CXADRP78310 365 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 MEF2DQ14814 521 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 IGFBP7Q16270 282 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 MICBQ29980 383 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 TBC1D28Q2M2D7 210 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 PIGYQ3MUY2 71 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 ZNF626Q68DY1 528 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 OR2T2Q6IF00 324 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 C3P1Q6ZMU1 363 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 C17orf107Q6ZR85 190 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 SLC25A26Q70HW3 274 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 CXorf67Q86X51 503 aaPredicted RBP7.9□□□□□ -1.14
ATG4A-202ENST00000345734 WFDC3Q8IUB2 231 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 ZDHHC23Q8IYP9 409 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 FBXL14Q8N1E6 418 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 ZNF611Q8N823 705 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 WDR31Q8NA23 367 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 OR4K15Q8NH41 348 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 TECTBQ96PL2 329 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 ST6GALNAC5Q9BVH7 336 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.9□□□□□ -1.14
ATG4A-202ENST00000345734 PLSCR4Q9NRQ2 329 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 SLC23A1Q9UHI7 598 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 KIF25Q9UIL4 384 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 SCP2D1Q9UJQ7 156 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 VSIG4Q9Y279 399 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 TP53TG5Q9Y2B4 290 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 HSPB11Q9Y547 144 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 PCNX1Q96RV3 2341 aa7.9□□□□□ -1.14
ATG4A-202ENST00000345734 MBD3L4A6NDZ8 208 aaPredicted RBP7.9□□□□□ -1.15
ATG4A-202ENST00000345734 MBD3L3A6NE82 208 aaPredicted RBP7.9□□□□□ -1.15
ATG4A-202ENST00000345734 MBD3L5A6NJ08 208 aaPredicted RBP7.9□□□□□ -1.15
ATG4A-202ENST00000345734 MPTX1A8MV57 137 aa7.9□□□□□ -1.15
ATG4A-202ENST00000345734 GEMIN2O14893 280 aaKnown RBP7.9□□□□□ -1.15
ATG4A-202ENST00000345734 CREBL2O60519 120 aaPredicted RBP7.9□□□□□ -1.15
ATG4A-202ENST00000345734 CGAP01215 116 aa7.9□□□□□ -1.15
ATG4A-202ENST00000345734 ANXA3P12429 323 aa7.9□□□□□ -1.15
ATG4A-202ENST00000345734 NPBWR2P48146 333 aa7.9□□□□□ -1.15
ATG4A-202ENST00000345734 UBE2MP61081 183 aaKnown RBP7.9□□□□□ -1.15
ATG4A-202ENST00000345734 ERVS71-1P61550 626 aa7.9□□□□□ -1.15
ATG4A-202ENST00000345734 TSPAN5P62079 268 aa7.9□□□□□ -1.15
ATG4A-202ENST00000345734 ATPAF1Q5TC12 328 aaPredicted RBP7.9□□□□□ -1.15
ATG4A-202ENST00000345734 LAMTOR1Q6IAA8 161 aa7.9□□□□□ -1.15
ATG4A-202ENST00000345734 RPUSD3Q6P087 351 aaKnown RBP7.9□□□□□ -1.15
ATG4A-202ENST00000345734 TMED4Q7Z7H5 227 aa7.9□□□□□ -1.15
ATG4A-202ENST00000345734 OR8H3Q8N146 312 aa7.9□□□□□ -1.15
ATG4A-202ENST00000345734 CSNK2A3Q8NEV1 391 aa7.9□□□□□ -1.15
ATG4A-202ENST00000345734 PXT1Q8NFP0 134 aa7.9□□□□□ -1.15
ATG4A-202ENST00000345734 MBD3L2Q8NHZ7 208 aaPredicted RBP7.9□□□□□ -1.15
ATG4A-202ENST00000345734 EXTL1Q92935 676 aa7.9□□□□□ -1.15
ATG4A-202ENST00000345734 HDHD3Q9BSH5 251 aaPredicted RBP7.9□□□□□ -1.15
ATG4A-202ENST00000345734 GPN1Q9HCN4 374 aaPredicted RBP7.9□□□□□ -1.15
ATG4A-202ENST00000345734 CA10Q9NS85 328 aa7.9□□□□□ -1.15
ATG4A-202ENST00000345734 PLEKHJ1Q9NW61 149 aa7.9□□□□□ -1.15
ATG4A-202ENST00000345734 PLEKHA6Q9Y2H5 1048 aa7.9□□□□□ -1.15
ATG4A-202ENST00000345734 FAM215AQ9Y5M1 114 aa7.9□□□□□ -1.15
ATG4A-202ENST00000345734 CADP27708 2225 aa7.89□□□□□ -1.15
ATG4A-202ENST00000345734 SNRPGP15A8MWD9 76 aa7.89□□□□□ -1.15
ATG4A-202ENST00000345734 ZNF732B4DXR9 585 aa7.89□□□□□ -1.15
ATG4A-202ENST00000345734 H7C2Y5 167 aa7.89□□□□□ -1.15
ATG4A-202ENST00000345734 MSTNO14793 375 aa7.89□□□□□ -1.15
ATG4A-202ENST00000345734 SMPD2O60906 423 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms