RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 PRR14Q9BWN1 585 aa17.3■□□□□ 0.36
HDAC4-201ENST00000345617 RBM38Q9H0Z9 239 aaKnown RBP17.3■□□□□ 0.36
HDAC4-201ENST00000345617 IL2RAP01589 272 aa17.3■□□□□ 0.36
HDAC4-201ENST00000345617 MICBQ29980 383 aa17.3■□□□□ 0.36
HDAC4-201ENST00000345617 MELTFP08582 738 aa17.3■□□□□ 0.36
HDAC4-201ENST00000345617 SUCLG1P53597 346 aaKnown RBP17.3■□□□□ 0.36
HDAC4-201ENST00000345617 NT5CQ8TCD5 201 aa17.3■□□□□ 0.36
HDAC4-201ENST00000345617 RER1O15258 196 aa17.3■□□□□ 0.36
HDAC4-201ENST00000345617 ONECUT2O95948 504 aa17.3■□□□□ 0.36
HDAC4-201ENST00000345617 CTSDP07339 412 aaPredicted RBP17.3■□□□□ 0.36
HDAC4-201ENST00000345617 POU2F2P09086 479 aa17.3■□□□□ 0.36
HDAC4-201ENST00000345617 GAGE10A6NGK3 116 aa17.29■□□□□ 0.36
HDAC4-201ENST00000345617 F5H697 171 aa17.29■□□□□ 0.36
HDAC4-201ENST00000345617 SLC25A42Q86VD7 318 aa17.29■□□□□ 0.36
HDAC4-201ENST00000345617 ST6GAL2Q96JF0 529 aa17.29■□□□□ 0.36
HDAC4-201ENST00000345617 B4GALT1P15291 398 aa17.29■□□□□ 0.36
HDAC4-201ENST00000345617 NTHL1P78549 312 aa17.29■□□□□ 0.36
HDAC4-201ENST00000345617 OR2J1Q9GZK6 312 aa17.29■□□□□ 0.36
HDAC4-201ENST00000345617 VDAC1P21796 283 aa17.29■□□□□ 0.36
HDAC4-201ENST00000345617 Q56UQ5 140 aa17.29■□□□□ 0.36
HDAC4-201ENST00000345617 ACSM6Q6P461 480 aa17.29■□□□□ 0.36
HDAC4-201ENST00000345617 SSX8Q7RTT4 187 aa17.29■□□□□ 0.36
HDAC4-201ENST00000345617 H1FOOQ8IZA3 346 aaPredicted RBP17.29■□□□□ 0.36
HDAC4-201ENST00000345617 ZNF707Q96C28 371 aaPredicted RBP17.29■□□□□ 0.36
HDAC4-201ENST00000345617 LIPGQ9Y5X9 500 aa17.29■□□□□ 0.36
HDAC4-201ENST00000345617 UPK1AO00322 258 aa17.29■□□□□ 0.36
HDAC4-201ENST00000345617 PRRG2O14669 202 aa17.29■□□□□ 0.36
HDAC4-201ENST00000345617 TNFSF11O14788 317 aa17.29■□□□□ 0.36
HDAC4-201ENST00000345617 PITX3O75364 302 aa17.29■□□□□ 0.36
HDAC4-201ENST00000345617 PRRX1P54821 245 aa17.29■□□□□ 0.36
HDAC4-201ENST00000345617 JAG1P78504 1218 aa17.29■□□□□ 0.36
HDAC4-201ENST00000345617 GMLQ99445 158 aa17.29■□□□□ 0.36
HDAC4-201ENST00000345617 CD27P26842 260 aa17.29■□□□□ 0.36
HDAC4-201ENST00000345617 CAMPP49913 170 aa17.29■□□□□ 0.36
HDAC4-201ENST00000345617 DYNLT3P51808 116 aa17.29■□□□□ 0.36
HDAC4-201ENST00000345617 SPACA9Q96E40 222 aaPredicted RBP17.29■□□□□ 0.36
HDAC4-201ENST00000345617 CRHP06850 196 aa17.29■□□□□ 0.36
HDAC4-201ENST00000345617 WDR74Q6RFH5 385 aaPredicted RBP17.29■□□□□ 0.36
HDAC4-201ENST00000345617 BADQ92934 168 aa17.29■□□□□ 0.36
HDAC4-201ENST00000345617 PCMT1P22061 227 aa17.28■□□□□ 0.36
HDAC4-201ENST00000345617 RGS7BPQ6MZT1 257 aaPredicted RBP17.28■□□□□ 0.36
HDAC4-201ENST00000345617 C6orf15Q6UXA7 325 aaPredicted RBP17.28■□□□□ 0.36
HDAC4-201ENST00000345617 VN1R1Q9GZP7 353 aa17.28■□□□□ 0.36
HDAC4-201ENST00000345617 THAP10Q9P2Z0 257 aaPredicted RBP17.28■□□□□ 0.36
HDAC4-201ENST00000345617 NEU3Q9UQ49 428 aa17.28■□□□□ 0.36
HDAC4-201ENST00000345617 TRBV9A0A0B4J1U6 114 aa17.28■□□□□ 0.36
HDAC4-201ENST00000345617 A0A1B0GU03 582 aa17.28■□□□□ 0.36
HDAC4-201ENST00000345617 RBP4P02753 201 aa17.28■□□□□ 0.36
HDAC4-201ENST00000345617 ACAA2P42765 397 aaKnown RBP17.28■□□□□ 0.36
HDAC4-201ENST00000345617 SLC37A2Q8TED4 501 aa17.28■□□□□ 0.36
HDAC4-201ENST00000345617 TOX2Q96NM4 488 aa17.28■□□□□ 0.36
HDAC4-201ENST00000345617 SRD5A3Q9H8P0 318 aa17.28■□□□□ 0.36
HDAC4-201ENST00000345617 OR6C3Q9NZP0 311 aa17.28■□□□□ 0.36
HDAC4-201ENST00000345617 CEACAM3P40198 252 aa17.28■□□□□ 0.36
HDAC4-201ENST00000345617 SERF2P84101 59 aa17.28■□□□□ 0.36
HDAC4-201ENST00000345617 PRDX4Q13162 271 aa17.28■□□□□ 0.36
HDAC4-201ENST00000345617 SLC25A30Q5SVS4 291 aa17.28■□□□□ 0.36
HDAC4-201ENST00000345617 NKAIN2Q5VXU1 208 aa17.28■□□□□ 0.36
HDAC4-201ENST00000345617 SLC35E4Q6ICL7 350 aa17.28■□□□□ 0.36
HDAC4-201ENST00000345617 LMX1BO60663 402 aa17.28■□□□□ 0.36
HDAC4-201ENST00000345617 PDCD6O75340 191 aa17.28■□□□□ 0.36
HDAC4-201ENST00000345617 PTPRDP23468 1912 aa17.28■□□□□ 0.36
HDAC4-201ENST00000345617 TCF21O43680 179 aa17.28■□□□□ 0.36
HDAC4-201ENST00000345617 CDS2O95674 445 aa17.28■□□□□ 0.36
HDAC4-201ENST00000345617 TMEFF2Q9UIK5 374 aaPredicted RBP17.28■□□□□ 0.36
HDAC4-201ENST00000345617 FXYD1O00168 92 aa17.28■□□□□ 0.36
HDAC4-201ENST00000345617 RPL34P49207 117 aaKnown RBP17.28■□□□□ 0.36
HDAC4-201ENST00000345617 PYCR3Q53H96 274 aa17.28■□□□□ 0.36
HDAC4-201ENST00000345617 THOC3Q96J01 351 aaKnown RBP17.28■□□□□ 0.36
HDAC4-201ENST00000345617 MRPL13Q9BYD1 178 aaKnown RBP17.28■□□□□ 0.36
HDAC4-201ENST00000345617 RAB32Q13637 225 aa17.28■□□□□ 0.36
HDAC4-201ENST00000345617 FAM27D1Q5T7N8 215 aa17.28■□□□□ 0.36
HDAC4-201ENST00000345617 PKDREJQ9NTG1 2253 aa17.28■□□□□ 0.36
HDAC4-201ENST00000345617 FGF17O60258 216 aa17.27■□□□□ 0.36
HDAC4-201ENST00000345617 HPXP02790 462 aa17.27■□□□□ 0.36
HDAC4-201ENST00000345617 MRGPREQ86SM8 312 aa17.27■□□□□ 0.36
HDAC4-201ENST00000345617 MOGAT1Q96PD6 335 aa17.27■□□□□ 0.36
HDAC4-201ENST00000345617 RSRP1Q9BUV0 290 aa17.27■□□□□ 0.36
HDAC4-201ENST00000345617 SIGLEC7Q9Y286 467 aa17.27■□□□□ 0.36
HDAC4-201ENST00000345617 HRO43593 1189 aa17.27■□□□□ 0.36
HDAC4-201ENST00000345617 H3BQ15 152 aa17.27■□□□□ 0.36
HDAC4-201ENST00000345617 RAB9AP51151 201 aa17.27■□□□□ 0.36
HDAC4-201ENST00000345617 MBNL1Q9NR56 388 aaKnown RBP17.27■□□□□ 0.36
HDAC4-201ENST00000345617 STARD10Q9Y365 291 aa17.27■□□□□ 0.36
HDAC4-201ENST00000345617 SERTM1A2A2V5 107 aa17.27■□□□□ 0.35
HDAC4-201ENST00000345617 TRDCB7Z8K6 153 aa17.27■□□□□ 0.35
HDAC4-201ENST00000345617 TMPRSS11DO60235 418 aa17.27■□□□□ 0.35
HDAC4-201ENST00000345617 FAM219AQ8IW50 185 aa17.27■□□□□ 0.35
HDAC4-201ENST00000345617 RAB37Q96AX2 223 aa17.27■□□□□ 0.35
HDAC4-201ENST00000345617 MEGF10Q96KG7 1140 aa17.27■□□□□ 0.35
HDAC4-201ENST00000345617 MMP25Q9NPA2 562 aa17.27■□□□□ 0.35
HDAC4-201ENST00000345617 STRCP1A6NGW2 1772 aa17.27■□□□□ 0.35
HDAC4-201ENST00000345617 GPR3P46089 330 aa17.26■□□□□ 0.35
HDAC4-201ENST00000345617 C5orf17Q8NAS9 161 aa17.26■□□□□ 0.35
HDAC4-201ENST00000345617 WDR34Q96EX3 536 aa17.26■□□□□ 0.35
HDAC4-201ENST00000345617 PDFQ9HBH1 243 aa17.26■□□□□ 0.35
HDAC4-201ENST00000345617 PRDM7Q9NQW5 492 aa17.26■□□□□ 0.35
HDAC4-201ENST00000345617 ABLIM3O94929 683 aa17.26■□□□□ 0.35
HDAC4-201ENST00000345617 FBXL14Q8N1E6 418 aa17.26■□□□□ 0.35
HDAC4-201ENST00000345617 MYOZ1Q9NP98 299 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms