RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 SIAH2O43255 324 aa15.98■□□□□ 0.15
SMC4-201ENST00000344722 SEMA7AO75326 666 aa15.98■□□□□ 0.15
SMC4-201ENST00000344722 SRP14P37108 136 aaKnown RBP15.98■□□□□ 0.15
SMC4-201ENST00000344722 MLF2Q15773 248 aaPredicted RBP15.98■□□□□ 0.15
SMC4-201ENST00000344722 TMEM255AQ5JRV8 349 aa15.98■□□□□ 0.15
SMC4-201ENST00000344722 DDA1Q9BW61 102 aa15.98■□□□□ 0.15
SMC4-201ENST00000344722 OCIAD1Q9NX40 245 aa15.98■□□□□ 0.15
SMC4-201ENST00000344722 ZGLP1P0C6A0 271 aa15.98■□□□□ 0.15
SMC4-201ENST00000344722 FSTP19883 344 aa15.98■□□□□ 0.15
SMC4-201ENST00000344722 INSM1Q01101 510 aaPredicted RBP15.98■□□□□ 0.15
SMC4-201ENST00000344722 NHLH1Q02575 133 aa15.98■□□□□ 0.15
SMC4-201ENST00000344722 ACY3Q96HD9 319 aa15.98■□□□□ 0.15
SMC4-201ENST00000344722 FOXB1Q99853 325 aa15.98■□□□□ 0.15
SMC4-201ENST00000344722 CDK5RAP2Q96SN8 1893 aa15.98■□□□□ 0.15
SMC4-201ENST00000344722 A0A1W2PPC1 479 aa15.98■□□□□ 0.15
SMC4-201ENST00000344722 DNASE2O00115 360 aaPredicted RBP15.98■□□□□ 0.15
SMC4-201ENST00000344722 CEACAM6P40199 344 aa15.98■□□□□ 0.15
SMC4-201ENST00000344722 MMP16P51512 607 aa15.98■□□□□ 0.15
SMC4-201ENST00000344722 DCAF12Q5T6F0 453 aa15.98■□□□□ 0.15
SMC4-201ENST00000344722 VHLLQ6RSH7 139 aa15.98■□□□□ 0.15
SMC4-201ENST00000344722 DOK5Q9P104 306 aa15.98■□□□□ 0.15
SMC4-201ENST00000344722 LAMTOR5O43504 91 aa15.98■□□□□ 0.15
SMC4-201ENST00000344722 CXCL13O43927 109 aa15.98■□□□□ 0.15
SMC4-201ENST00000344722 CCR2P41597 374 aa15.98■□□□□ 0.15
SMC4-201ENST00000344722 CBLN3Q6UW01 205 aa15.98■□□□□ 0.15
SMC4-201ENST00000344722 RFLNBQ8N5W9 214 aa15.98■□□□□ 0.15
SMC4-201ENST00000344722 KCNE5Q9UJ90 142 aa15.98■□□□□ 0.15
SMC4-201ENST00000344722 MRPS18BQ9Y676 258 aaKnown RBP15.98■□□□□ 0.15
SMC4-201ENST00000344722 TRIP11Q15643 1979 aa15.98■□□□□ 0.15
SMC4-201ENST00000344722 CER1O95813 267 aa15.97■□□□□ 0.15
SMC4-201ENST00000344722 PGA4P0DJD7 388 aa15.97■□□□□ 0.15
SMC4-201ENST00000344722 PGA5P0DJD9 388 aa15.97■□□□□ 0.15
SMC4-201ENST00000344722 COX14Q96I36 57 aa15.97■□□□□ 0.15
SMC4-201ENST00000344722 POM121L2Q96KW2 1035 aa15.97■□□□□ 0.15
SMC4-201ENST00000344722 PCED1AQ9H1Q7 454 aa15.97■□□□□ 0.15
SMC4-201ENST00000344722 WDR13Q9H1Z4 485 aa15.97■□□□□ 0.15
SMC4-201ENST00000344722 A0A096LPE4 126 aa15.97■□□□□ 0.15
SMC4-201ENST00000344722 A0A1W2PPZ6 126 aa15.97■□□□□ 0.15
SMC4-201ENST00000344722 CD8AP01732 235 aa15.97■□□□□ 0.15
SMC4-201ENST00000344722 EIF4EBP2Q13542 120 aaPredicted RBP15.97■□□□□ 0.15
SMC4-201ENST00000344722 ZNF738Q8NE65 137 aa15.97■□□□□ 0.15
SMC4-201ENST00000344722 MRPL30Q8TCC3 161 aaKnown RBP15.97■□□□□ 0.15
SMC4-201ENST00000344722 PRSS27Q9BQR3 290 aa15.97■□□□□ 0.15
SMC4-201ENST00000344722 CBR3O75828 277 aa15.97■□□□□ 0.15
SMC4-201ENST00000344722 KIR3DL2P43630 455 aa15.97■□□□□ 0.15
SMC4-201ENST00000344722 RRADP55042 308 aa15.97■□□□□ 0.15
SMC4-201ENST00000344722 TAS2R60P59551 318 aa15.97■□□□□ 0.15
SMC4-201ENST00000344722 PRSS41Q7RTY9 318 aa15.97■□□□□ 0.15
SMC4-201ENST00000344722 LRRC3BQ96PB8 259 aa15.97■□□□□ 0.15
SMC4-201ENST00000344722 WDR61Q9GZS3 305 aaKnown RBP15.97■□□□□ 0.15
SMC4-201ENST00000344722 NKX2-6A6NCS4 301 aa15.97■□□□□ 0.15
SMC4-201ENST00000344722 HKR1P10072 659 aa15.97■□□□□ 0.15
SMC4-201ENST00000344722 CCR5P51681 352 aa15.97■□□□□ 0.15
SMC4-201ENST00000344722 RPS16P62249 146 aaKnown RBP15.97■□□□□ 0.15
SMC4-201ENST00000344722 ELSPBP1Q96BH3 223 aa15.97■□□□□ 0.15
SMC4-201ENST00000344722 DYNLRB1Q9NP97 96 aa15.97■□□□□ 0.15
SMC4-201ENST00000344722 TMEM97Q5BJF2 176 aa15.96■□□□□ 0.15
SMC4-201ENST00000344722 EIF4E3Q8N5X7 224 aaKnown RBP15.96■□□□□ 0.15
SMC4-201ENST00000344722 OR10G3Q8NGC4 313 aa15.96■□□□□ 0.15
SMC4-201ENST00000344722 GINS3Q9BRX5 216 aa15.96■□□□□ 0.15
SMC4-201ENST00000344722 MBD1Q9UIS9 605 aaPredicted RBP15.96■□□□□ 0.15
SMC4-201ENST00000344722 ZMIZ1Q9ULJ6 1067 aa15.96■□□□□ 0.15
SMC4-201ENST00000344722 ATAD5Q96QE3 1844 aa15.96■□□□□ 0.15
SMC4-201ENST00000344722 DIRC3C9JPN6 131 aa15.96■□□□□ 0.15
SMC4-201ENST00000344722 PPYP01298 95 aa15.96■□□□□ 0.15
SMC4-201ENST00000344722 GNG3P63215 75 aa15.96■□□□□ 0.15
SMC4-201ENST00000344722 CEACAM16Q2WEN9 425 aa15.96■□□□□ 0.15
SMC4-201ENST00000344722 C11orf42Q8N5U0 333 aa15.96■□□□□ 0.15
SMC4-201ENST00000344722 KLRC4-KLRK1H3BQV0 150 aa15.96■□□□□ 0.15
SMC4-201ENST00000344722 PRF1P14222 555 aa15.96■□□□□ 0.15
SMC4-201ENST00000344722 PSG6Q00889 435 aa15.96■□□□□ 0.15
SMC4-201ENST00000344722 FAM219AQ8IW50 185 aa15.96■□□□□ 0.15
SMC4-201ENST00000344722 MFRPQ9BY79 579 aa15.96■□□□□ 0.15
SMC4-201ENST00000344722 GPR61Q9BZJ8 451 aa15.96■□□□□ 0.15
SMC4-201ENST00000344722 GPR132Q9UNW8 380 aa15.96■□□□□ 0.15
SMC4-201ENST00000344722 MRPS2Q9Y399 296 aaKnown RBP15.96■□□□□ 0.15
SMC4-201ENST00000344722 LRRC30A6NM36 301 aa15.95■□□□□ 0.14
SMC4-201ENST00000344722 BMPR1BO00238 502 aa15.95■□□□□ 0.14
SMC4-201ENST00000344722 RPS4Y1P22090 263 aaKnown RBP15.95■□□□□ 0.14
SMC4-201ENST00000344722 VWA1Q6PCB0 445 aa15.95■□□□□ 0.14
SMC4-201ENST00000344722 TAAR3PQ9P1P4 343 aa15.95■□□□□ 0.14
SMC4-201ENST00000344722 SMCHD1A6NHR9 2005 aa15.95■□□□□ 0.14
SMC4-201ENST00000344722 CTXND1A0A1B0GTU2 59 aa15.95■□□□□ 0.14
SMC4-201ENST00000344722 ZNF207O43670 478 aaKnown RBP15.95■□□□□ 0.14
SMC4-201ENST00000344722 CIDEAO60543 219 aa15.95■□□□□ 0.14
SMC4-201ENST00000344722 GLI3P10071 1580 aa15.95■□□□□ 0.14
SMC4-201ENST00000344722 COL16A1Q07092 1604 aaPredicted RBP15.95■□□□□ 0.14
SMC4-201ENST00000344722 DSCR4P56555 118 aaPredicted RBP15.95■□□□□ 0.14
SMC4-201ENST00000344722 DHRS11Q6UWP2 260 aa15.95■□□□□ 0.14
SMC4-201ENST00000344722 UNQ9370/PRO34162Q6UXP9 181 aa15.95■□□□□ 0.14
SMC4-201ENST00000344722 ETV3LQ6ZN32 361 aa15.95■□□□□ 0.14
SMC4-201ENST00000344722 NDFIP1Q9BT67 221 aa15.95■□□□□ 0.14
SMC4-201ENST00000344722 KCNMB2Q9Y691 235 aa15.95■□□□□ 0.14
SMC4-201ENST00000344722 NUP214P35658 2090 aaPredicted RBP15.95■□□□□ 0.14
SMC4-201ENST00000344722 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.95■□□□□ 0.14
SMC4-201ENST00000344722 KMT5CQ86Y97 462 aa15.95■□□□□ 0.14
SMC4-201ENST00000344722 H1FXQ92522 213 aaKnown RBP15.95■□□□□ 0.14
SMC4-201ENST00000344722 VSTM2LQ96N03 204 aa15.95■□□□□ 0.14
SMC4-201ENST00000344722 UBE2ZQ9H832 354 aaPredicted RBP15.95■□□□□ 0.14
SMC4-201ENST00000344722 TMEM167BQ9NRX6 74 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms