RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 C21orf140B9A014 251 aa12.82□□□□□ -0.36
VIPAS39-202ENST00000343765 LINC01387J3KSC0 135 aa12.82□□□□□ -0.36
VIPAS39-202ENST00000343765 MEOX1P50221 254 aa12.82□□□□□ -0.36
VIPAS39-202ENST00000343765 HERV-K104P61576 105 aa12.82□□□□□ -0.36
VIPAS39-202ENST00000343765 RAB1AP62820 205 aa12.82□□□□□ -0.36
VIPAS39-202ENST00000343765 COLCA1Q6ZS62 124 aa12.82□□□□□ -0.36
VIPAS39-202ENST00000343765 MCEMP1Q8IX19 187 aa12.82□□□□□ -0.36
VIPAS39-202ENST00000343765 HPSE2Q8WWQ2 592 aa12.82□□□□□ -0.36
VIPAS39-202ENST00000343765 LINC00470Q9BZP3 86 aa12.82□□□□□ -0.36
VIPAS39-202ENST00000343765 TAF9BQ9HBM6 251 aa12.82□□□□□ -0.36
VIPAS39-202ENST00000343765 DNAJB11Q9UBS4 358 aa12.82□□□□□ -0.36
VIPAS39-202ENST00000343765 ABCD4O14678 606 aa12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 NME2P22392 152 aa12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 GLP1RP43220 463 aa12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 TMEM187Q14656 261 aa12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 MEX3BQ6ZN04 569 aaKnown RBP12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 NEK7Q8TDX7 302 aa12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 EXTL1Q92935 676 aa12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 ARL11Q969Q4 196 aa12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 REPIN1Q9BWE0 567 aaKnown RBP12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 DEFB127Q9H1M4 99 aa12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 FBXL17Q9UF56 701 aa12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 GLS2Q9UI32 602 aa12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 FAM74A7A6NL05 159 aa12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 ZNF732B4DXR9 585 aa12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 PHF1O43189 567 aaPredicted RBP12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 DEDDO75618 318 aa12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 FAM157CP0CG43 387 aa12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 FAM74A3Q4VXF1 159 aa12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 HES3Q5TGS1 186 aa12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 IL22RA1Q8N6P7 574 aa12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 ADAMTS17Q8TE56 1095 aa12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 ADAT1Q9BUB4 502 aaKnown RBP12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 PCDHB16Q9NRJ7 776 aa12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 TMEM100Q9NV29 134 aa12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 PRSS50Q9UI38 385 aa12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 PQLC2LA1A4F0 135 aa12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 GPR31O00270 319 aa12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 BET1O15155 118 aa12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 IGFBP7Q16270 282 aa12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 HIKESHIQ53FT3 197 aa12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 ZDHHC23Q8IYP9 409 aa12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 TECTBQ96PL2 329 aa12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 GPHA2Q96T91 129 aa12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 TSNAXQ99598 290 aaKnown RBP12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 PRRX2Q99811 253 aa12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 ZNF552Q9H707 407 aaPredicted RBP12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 TREM1Q9NP99 234 aa12.81□□□□□ -0.36
VIPAS39-202ENST00000343765 MBPP02686 304 aaPredicted RBP12.8□□□□□ -0.36
VIPAS39-202ENST00000343765 NRN1LQ496H8 165 aa12.8□□□□□ -0.36
VIPAS39-202ENST00000343765 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.8□□□□□ -0.36
VIPAS39-202ENST00000343765 ZNF488Q96MN9 340 aa12.8□□□□□ -0.36
VIPAS39-202ENST00000343765 PARP12Q9H0J9 701 aaKnown RBP12.8□□□□□ -0.36
VIPAS39-202ENST00000343765 LPAR3Q9UBY5 353 aa12.8□□□□□ -0.36
VIPAS39-202ENST00000343765 TUBD1Q9UJT1 453 aa12.8□□□□□ -0.36
VIPAS39-202ENST00000343765 TMEM218A2RU14 115 aa12.8□□□□□ -0.36
VIPAS39-202ENST00000343765 RAB19A4D1S5 217 aa12.8□□□□□ -0.36
VIPAS39-202ENST00000343765 AGPAT2O15120 278 aa12.8□□□□□ -0.36
VIPAS39-202ENST00000343765 LILRA1O75019 489 aa12.8□□□□□ -0.36
VIPAS39-202ENST00000343765 MED6O75586 246 aa12.8□□□□□ -0.36
VIPAS39-202ENST00000343765 ADCYAP1P18509 176 aa12.8□□□□□ -0.36
VIPAS39-202ENST00000343765 TSC22D1Q15714 1073 aa12.8□□□□□ -0.36
VIPAS39-202ENST00000343765 OR4A4PQ8NGN8 299 aa12.8□□□□□ -0.36
VIPAS39-202ENST00000343765 LHFPL5Q8TAF8 219 aa12.8□□□□□ -0.36
VIPAS39-202ENST00000343765 MOB3AQ96BX8 217 aa12.8□□□□□ -0.36
VIPAS39-202ENST00000343765 BSCL2Q96G97 398 aaPredicted RBP12.8□□□□□ -0.36
VIPAS39-202ENST00000343765 NKX6-2Q9C056 277 aaPredicted RBP12.8□□□□□ -0.36
VIPAS39-202ENST00000343765 RYDENQ9NUL5 291 aaKnown RBP12.8□□□□□ -0.36
VIPAS39-202ENST00000343765 FAM96BQ9Y3D0 163 aa12.8□□□□□ -0.36
VIPAS39-202ENST00000343765 PRR14LQ5THK1 2151 aa12.79□□□□□ -0.36
VIPAS39-202ENST00000343765 SYNGR1O43759 233 aa12.79□□□□□ -0.36
VIPAS39-202ENST00000343765 F12P00748 615 aaPredicted RBP12.79□□□□□ -0.36
VIPAS39-202ENST00000343765 SP1P08047 785 aa12.79□□□□□ -0.36
VIPAS39-202ENST00000343765 TMEM33P57088 247 aa12.79□□□□□ -0.36
VIPAS39-202ENST00000343765 ZNF169Q14929 603 aaPredicted RBP12.79□□□□□ -0.36
VIPAS39-202ENST00000343765 STK11Q15831 433 aa12.79□□□□□ -0.36
VIPAS39-202ENST00000343765 GUCA2BQ16661 112 aa12.79□□□□□ -0.36
VIPAS39-202ENST00000343765 SPATA46Q5T0L3 261 aa12.79□□□□□ -0.36
VIPAS39-202ENST00000343765 OR52M1Q8NGK5 317 aa12.79□□□□□ -0.36
VIPAS39-202ENST00000343765 ERGIC1Q969X5 290 aa12.79□□□□□ -0.36
VIPAS39-202ENST00000343765 APOBEC3DQ96AK3 386 aaPredicted RBP12.79□□□□□ -0.36
VIPAS39-202ENST00000343765 MTCH1Q9NZJ7 389 aa12.79□□□□□ -0.36
VIPAS39-202ENST00000343765 CACNA1GO43497 2377 aa12.79□□□□□ -0.36
VIPAS39-202ENST00000343765 DNASE2O00115 360 aaPredicted RBP12.79□□□□□ -0.36
VIPAS39-202ENST00000343765 PPYP01298 95 aa12.79□□□□□ -0.36
VIPAS39-202ENST00000343765 LPAR6P43657 344 aa12.79□□□□□ -0.36
VIPAS39-202ENST00000343765 ID4P47928 161 aa12.79□□□□□ -0.36
VIPAS39-202ENST00000343765 MST1LQ2TV78 715 aa12.79□□□□□ -0.36
VIPAS39-202ENST00000343765 SPIN3Q5JUX0 258 aa12.79□□□□□ -0.36
VIPAS39-202ENST00000343765 TMEM211Q6ICI0 200 aa12.79□□□□□ -0.36
VIPAS39-202ENST00000343765 UQCC3Q6UW78 93 aa12.79□□□□□ -0.36
VIPAS39-202ENST00000343765 LIAT1Q6ZQX7 453 aa12.79□□□□□ -0.36
VIPAS39-202ENST00000343765 GLYATL2Q8WU03 294 aa12.79□□□□□ -0.36
VIPAS39-202ENST00000343765 SECTM1Q8WVN6 248 aa12.79□□□□□ -0.36
VIPAS39-202ENST00000343765 TP53RKQ96S44 253 aa12.79□□□□□ -0.36
VIPAS39-202ENST00000343765 SVILO95425 2214 aa12.79□□□□□ -0.36
VIPAS39-202ENST00000343765 RPL36A-HNRNPH2H7BZ11 118 aa12.78□□□□□ -0.36
VIPAS39-202ENST00000343765 ATG12O94817 140 aa12.78□□□□□ -0.36
VIPAS39-202ENST00000343765 PLP2Q04941 152 aa12.78□□□□□ -0.36
VIPAS39-202ENST00000343765 TGIF1Q15583 401 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms