RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 CSTAP01040 98 aa7.12□□□□□ -1.27
ATG4A-201ENST00000343524 ZNF93P35789 620 aaPredicted RBP7.12□□□□□ -1.27
ATG4A-201ENST00000343524 ABCA11PQ4W5N1 156 aa7.12□□□□□ -1.27
ATG4A-201ENST00000343524 MORN2Q502X0 79 aa7.12□□□□□ -1.27
ATG4A-201ENST00000343524 RNFT1Q5M7Z0 435 aa7.12□□□□□ -1.27
ATG4A-201ENST00000343524 DNM1P34Q6PK57 102 aa7.12□□□□□ -1.27
ATG4A-201ENST00000343524 CLEC2AQ6UVW9 174 aa7.12□□□□□ -1.27
ATG4A-201ENST00000343524 COX15Q7KZN9 410 aa7.12□□□□□ -1.27
ATG4A-201ENST00000343524 C16orf82Q7Z2V1 217 aa7.12□□□□□ -1.27
ATG4A-201ENST00000343524 CENPVQ7Z7K6 275 aaPredicted RBP7.12□□□□□ -1.27
ATG4A-201ENST00000343524 CCDC71LQ8N9Z2 235 aa7.12□□□□□ -1.27
ATG4A-201ENST00000343524 ZNF248Q8NDW4 579 aa7.12□□□□□ -1.27
ATG4A-201ENST00000343524 OR51G1Q8NGK1 321 aa7.12□□□□□ -1.27
ATG4A-201ENST00000343524 C8orf44Q96CB5 159 aa7.12□□□□□ -1.27
ATG4A-201ENST00000343524 SMIM12Q96EX1 92 aa7.12□□□□□ -1.27
ATG4A-201ENST00000343524 CIB3Q96Q77 187 aaPredicted RBP7.12□□□□□ -1.27
ATG4A-201ENST00000343524 AMELYQ99218 206 aa7.12□□□□□ -1.27
ATG4A-201ENST00000343524 ZNF552Q9H707 407 aaPredicted RBP7.12□□□□□ -1.27
ATG4A-201ENST00000343524 MOB1AQ9H8S9 216 aa7.12□□□□□ -1.27
ATG4A-201ENST00000343524 LYRM4Q9HD34 91 aa7.12□□□□□ -1.27
ATG4A-201ENST00000343524 DECR2Q9NUI1 292 aa7.12□□□□□ -1.27
ATG4A-201ENST00000343524 TMEM106BQ9NUM4 274 aa7.12□□□□□ -1.27
ATG4A-201ENST00000343524 FBXO34Q9NWN3 711 aa7.12□□□□□ -1.27
ATG4A-201ENST00000343524 OR6C3Q9NZP0 311 aa7.12□□□□□ -1.27
ATG4A-201ENST00000343524 B3GAT1Q9P2W7 334 aa7.12□□□□□ -1.27
ATG4A-201ENST00000343524 HSPB7Q9UBY9 170 aa7.12□□□□□ -1.27
ATG4A-201ENST00000343524 FUT9Q9Y231 359 aa7.12□□□□□ -1.27
ATG4A-201ENST00000343524 MRPS28Q9Y2Q9 187 aaKnown RBP7.12□□□□□ -1.27
ATG4A-201ENST00000343524 GCN1Q92616 2671 aaKnown RBP7.12□□□□□ -1.27
ATG4A-201ENST00000343524 PIGBOS1A0A0B4J2F0 54 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 FAM166BA8MTA8 275 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 ZNF878C9JN71 531 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 HPNP05981 417 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 OR5G3P0C626 314 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 ZNF20P17024 532 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 BMP5P22003 454 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 OR1D2P34982 312 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 RPL19P84098 196 aaKnown RBP7.11□□□□□ -1.27
ATG4A-201ENST00000343524 RPL18Q07020 188 aaKnown RBP7.11□□□□□ -1.27
ATG4A-201ENST00000343524 TMEM41BQ5BJD5 291 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 ZNF880Q6PDB4 577 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 MRGPRGQ86SM5 289 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 LINC01551Q86U37 167 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 UBALD2Q8IYN6 164 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 SMRP1Q8NCR6 262 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 OR4C5Q8NGB2 326 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 OR2T10Q8NGZ9 312 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 CMTM2Q8TAZ6 248 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 SDSLQ96GA7 329 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 VPS25Q9BRG1 176 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 ABHD6Q9BV23 337 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 MAGT1Q9H0U3 335 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 GNG13Q9P2W3 67 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 UQCR10Q9UDW1 63 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 B9D1Q9UPM9 204 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 SLC7A11Q9UPY5 501 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 EMC9Q9Y3B6 208 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 INSL6Q9Y581 213 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 OTOGLQ3ZCN5 2332 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 TET1Q8NFU7 2136 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 ZFYVE26Q68DK2 2539 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 IGKV1D-42A0A075B6H8 117 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 A6NCN8 305 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 SERINC4A6NH21 518 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 F6UZH7 168 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 H7C1C5 153 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 CYR61O00622 381 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 XRCC2O43543 280 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 WDR1O75083 606 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 SEMA4FO95754 770 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 MPIG6BO95866 241 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 H2BFMP0C1H6 154 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 SLC11A1P49279 550 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 LCN6P62502 163 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 ZNF92Q03936 586 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 ADIRFQ15847 76 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 PRICKLE4Q2TBC4 344 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 BSXQ3C1V8 233 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 FAM78AQ5JUQ0 283 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 ADAMTSL4Q6UY14 1074 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 PARS2Q7L3T8 475 aaKnown RBP7.11□□□□□ -1.27
ATG4A-201ENST00000343524 CMTM8Q8IZV2 173 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 KLHDC1Q8N7A1 406 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 C18orf12Q96KH6 178 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 GABRG3Q99928 467 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 OR10A2Q9H208 303 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 G6PC2Q9NQR9 355 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 PRSS50Q9UI38 385 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 HSF4Q9ULV5 492 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 SLC45A2Q9UMX9 530 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 DAPP1Q9UN19 280 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 PTRH2Q9Y3E5 179 aaKnown RBP7.11□□□□□ -1.27
ATG4A-201ENST00000343524 WIPI2Q9Y4P8 454 aa7.11□□□□□ -1.27
ATG4A-201ENST00000343524 PRSS37A4D1T9 235 aa7.1□□□□□ -1.27
ATG4A-201ENST00000343524 TMEM250H0YL14 139 aa7.1□□□□□ -1.27
ATG4A-201ENST00000343524 CCL25O15444 150 aa7.1□□□□□ -1.27
ATG4A-201ENST00000343524 LINC01565O15544 149 aa7.1□□□□□ -1.27
ATG4A-201ENST00000343524 KBTBD11O94819 623 aa7.1□□□□□ -1.27
ATG4A-201ENST00000343524 HLA-HP01893 362 aa7.1□□□□□ -1.27
ATG4A-201ENST00000343524 PRNPP04156 253 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms