RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 IL13RA1P78552 427 aa17.01■□□□□ 0.31
RTN1-202ENST00000342503 BAMBIQ13145 260 aa17.01■□□□□ 0.31
RTN1-202ENST00000342503 MPPED2Q15777 294 aa17.01■□□□□ 0.31
RTN1-202ENST00000342503 C11orf88Q6PI97 169 aa17.01■□□□□ 0.31
RTN1-202ENST00000342503 ASCC1Q8N9N2 400 aaKnown RBP17.01■□□□□ 0.31
RTN1-202ENST00000342503 TMEM185AQ8NFB2 350 aa17.01■□□□□ 0.31
RTN1-202ENST00000342503 TMEM230Q96A57 120 aa17.01■□□□□ 0.31
RTN1-202ENST00000342503 RTBDNQ9BSG5 229 aaPredicted RBP17.01■□□□□ 0.31
RTN1-202ENST00000342503 PIGMQ9H3S5 423 aa17.01■□□□□ 0.31
RTN1-202ENST00000342503 CHMP1AQ9HD42 196 aaPredicted RBP17.01■□□□□ 0.31
RTN1-202ENST00000342503 SH3BGRL2Q9UJC5 107 aa17.01■□□□□ 0.31
RTN1-202ENST00000342503 CEP295Q9C0D2 2601 aa17.01■□□□□ 0.31
RTN1-202ENST00000342503 ZGRF1Q86YA3 2104 aa17.01■□□□□ 0.31
RTN1-202ENST00000342503 HEATR1Q9H583 2144 aaKnown RBP17.01■□□□□ 0.31
RTN1-202ENST00000342503 TPD52L2O43399 206 aaKnown RBP17.01■□□□□ 0.31
RTN1-202ENST00000342503 OR5H8P0DN80 308 aa17.01■□□□□ 0.31
RTN1-202ENST00000342503 PI3P19957 117 aa17.01■□□□□ 0.31
RTN1-202ENST00000342503 VAMP1P23763 118 aa17.01■□□□□ 0.31
RTN1-202ENST00000342503 GCH1P30793 250 aa17.01■□□□□ 0.31
RTN1-202ENST00000342503 DHODHQ02127 395 aa17.01■□□□□ 0.31
RTN1-202ENST00000342503 FAM27E3Q08E93 113 aa17.01■□□□□ 0.31
RTN1-202ENST00000342503 ZNF154Q13106 437 aa17.01■□□□□ 0.31
RTN1-202ENST00000342503 IL13RA2Q14627 380 aa17.01■□□□□ 0.31
RTN1-202ENST00000342503 MBNL2Q5VZF2 373 aaKnown RBP17.01■□□□□ 0.31
RTN1-202ENST00000342503 NCCRP1Q6ZVX7 275 aaPredicted RBP17.01■□□□□ 0.31
RTN1-202ENST00000342503 C1orf174Q8IYL3 243 aa17.01■□□□□ 0.31
RTN1-202ENST00000342503 MITD1Q8WV92 249 aa17.01■□□□□ 0.31
RTN1-202ENST00000342503 MUCL1Q96DR8 90 aa17.01■□□□□ 0.31
RTN1-202ENST00000342503 SLA2Q9H6Q3 261 aa17.01■□□□□ 0.31
RTN1-202ENST00000342503 IGHV3-64DA0A0J9YX35 117 aa17■□□□□ 0.31
RTN1-202ENST00000342503 TMEM210A6NLX4 147 aa17■□□□□ 0.31
RTN1-202ENST00000342503 GRPP07492 148 aa17■□□□□ 0.31
RTN1-202ENST00000342503 C3orf36Q3SXR2 165 aa17■□□□□ 0.31
RTN1-202ENST00000342503 LY6G6FQ5SQ64 297 aa17■□□□□ 0.31
RTN1-202ENST00000342503 ZNF660Q6AZW8 331 aaPredicted RBP17■□□□□ 0.31
RTN1-202ENST00000342503 CASTOR1Q8WTX7 329 aa17■□□□□ 0.31
RTN1-202ENST00000342503 RHOFQ9HBH0 211 aa17■□□□□ 0.31
RTN1-202ENST00000342503 OPN4Q9UHM6 478 aa17■□□□□ 0.31
RTN1-202ENST00000342503 POLDIP2Q9Y2S7 368 aa17■□□□□ 0.31
RTN1-202ENST00000342503 PTPRQQ9UMZ3 2332 aa17■□□□□ 0.31
RTN1-202ENST00000342503 ATMQ13315 3056 aa16.99■□□□□ 0.31
RTN1-202ENST00000342503 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.99■□□□□ 0.31
RTN1-202ENST00000342503 MCRIP1C9JLW8 97 aa16.99■□□□□ 0.31
RTN1-202ENST00000342503 HSPB6O14558 160 aa16.99■□□□□ 0.31
RTN1-202ENST00000342503 CDIPTO14735 213 aa16.99■□□□□ 0.31
RTN1-202ENST00000342503 PGAM2P15259 253 aa16.99■□□□□ 0.31
RTN1-202ENST00000342503 GLRA1P23415 457 aa16.99■□□□□ 0.31
RTN1-202ENST00000342503 TMEM128Q5BJH2 165 aa16.99■□□□□ 0.31
RTN1-202ENST00000342503 LIN54Q6MZP7 749 aa16.99■□□□□ 0.31
RTN1-202ENST00000342503 Q6ZR03 302 aa16.99■□□□□ 0.31
RTN1-202ENST00000342503 SUMF2Q8NBJ7 301 aa16.99■□□□□ 0.31
RTN1-202ENST00000342503 PHB2Q99623 299 aa16.99■□□□□ 0.31
RTN1-202ENST00000342503 LIME1Q9H400 295 aa16.99■□□□□ 0.31
RTN1-202ENST00000342503 ERVK11-1P61568 191 aa16.99■□□□□ 0.31
RTN1-202ENST00000342503 SURF2Q15527 256 aaPredicted RBP16.99■□□□□ 0.31
RTN1-202ENST00000342503 MRGPRGQ86SM5 289 aa16.99■□□□□ 0.31
RTN1-202ENST00000342503 OR5M8Q8NGP6 311 aa16.99■□□□□ 0.31
RTN1-202ENST00000342503 GON7Q9BXV9 100 aa16.99■□□□□ 0.31
RTN1-202ENST00000342503 CXXC4Q9H2H0 198 aa16.99■□□□□ 0.31
RTN1-202ENST00000342503 SPACA1Q9HBV2 294 aa16.99■□□□□ 0.31
RTN1-202ENST00000342503 DSPP15924 2871 aaKnown RBP16.98■□□□□ 0.31
RTN1-202ENST00000342503 TRAV24A0A0B4J272 114 aa16.98■□□□□ 0.31
RTN1-202ENST00000342503 HS3ST1O14792 307 aa16.98■□□□□ 0.31
RTN1-202ENST00000342503 DUS4LO95620 317 aaKnown RBP16.98■□□□□ 0.31
RTN1-202ENST00000342503 NAPSAO96009 420 aa16.98■□□□□ 0.31
RTN1-202ENST00000342503 PGA5P0DJD9 388 aa16.98■□□□□ 0.31
RTN1-202ENST00000342503 ECI1P42126 302 aa16.98■□□□□ 0.31
RTN1-202ENST00000342503 LGALSLQ3ZCW2 172 aaPredicted RBP16.98■□□□□ 0.31
RTN1-202ENST00000342503 RGS7BPQ6MZT1 257 aaPredicted RBP16.98■□□□□ 0.31
RTN1-202ENST00000342503 DHRS11Q6UWP2 260 aa16.98■□□□□ 0.31
RTN1-202ENST00000342503 Q8IYB0 196 aa16.98■□□□□ 0.31
RTN1-202ENST00000342503 NEK7Q8TDX7 302 aa16.98■□□□□ 0.31
RTN1-202ENST00000342503 TMPRSS13Q9BYE2 586 aa16.98■□□□□ 0.31
RTN1-202ENST00000342503 TUBD1Q9UJT1 453 aa16.98■□□□□ 0.31
RTN1-202ENST00000342503 SFT2D2O95562 160 aa16.97■□□□□ 0.31
RTN1-202ENST00000342503 PPP3CBP16298 524 aa16.97■□□□□ 0.31
RTN1-202ENST00000342503 MSMPQ1L6U9 139 aa16.97■□□□□ 0.31
RTN1-202ENST00000342503 Q6P435 159 aa16.97■□□□□ 0.31
RTN1-202ENST00000342503 ASB13Q8WXK3 278 aa16.97■□□□□ 0.31
RTN1-202ENST00000342503 NRIP2Q9BQI9 281 aa16.97■□□□□ 0.31
RTN1-202ENST00000342503 WDR13Q9H1Z4 485 aa16.97■□□□□ 0.31
RTN1-202ENST00000342503 IFT22Q9H7X7 185 aa16.97■□□□□ 0.31
RTN1-202ENST00000342503 MSL2Q9HCI7 577 aa16.97■□□□□ 0.31
RTN1-202ENST00000342503 Q9N2K0 584 aa16.97■□□□□ 0.31
RTN1-202ENST00000342503 SLC23A1Q9UHI7 598 aa16.97■□□□□ 0.31
RTN1-202ENST00000342503 C14orf166Q9Y224 244 aaKnown RBP16.97■□□□□ 0.31
RTN1-202ENST00000342503 CCSO14618 274 aa16.96■□□□□ 0.31
RTN1-202ENST00000342503 DEGS1O15121 323 aa16.96■□□□□ 0.31
RTN1-202ENST00000342503 ZNF205O95201 554 aa16.96■□□□□ 0.31
RTN1-202ENST00000342503 CRYAAP02489 173 aa16.96■□□□□ 0.31
RTN1-202ENST00000342503 GMFBP60983 142 aa16.96■□□□□ 0.31
RTN1-202ENST00000342503 RBPJQ06330 500 aa16.96■□□□□ 0.31
RTN1-202ENST00000342503 Q6ZS49 121 aa16.96■□□□□ 0.31
RTN1-202ENST00000342503 C22orf34Q6ZV56 151 aa16.96■□□□□ 0.31
RTN1-202ENST00000342503 KCTD9Q7L273 389 aa16.96■□□□□ 0.31
RTN1-202ENST00000342503 C11orf53Q8IXP5 236 aa16.96■□□□□ 0.31
RTN1-202ENST00000342503 RDH5Q92781 318 aa16.96■□□□□ 0.31
RTN1-202ENST00000342503 DPCDQ9BVM2 203 aaPredicted RBP16.96■□□□□ 0.31
RTN1-202ENST00000342503 ATP6V1G1O75348 118 aa16.96■□□□□ 0.3
RTN1-202ENST00000342503 RGS11O94810 467 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms