RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 FOXRED2Q8IWF2 684 aa13.21□□□□□ -0.29
TRA2B-202ENST00000342294 ENTHD1Q8IYW4 607 aa13.21□□□□□ -0.29
TRA2B-202ENST00000342294 OR56B4Q8NH76 319 aa13.21□□□□□ -0.29
TRA2B-202ENST00000342294 EMG1Q92979 244 aaKnown RBP13.21□□□□□ -0.29
TRA2B-202ENST00000342294 EDA2RQ9HAV5 297 aa13.21□□□□□ -0.29
TRA2B-202ENST00000342294 PCDHB16Q9NRJ7 776 aa13.21□□□□□ -0.29
TRA2B-202ENST00000342294 SIRT4Q9Y6E7 314 aaPredicted RBP13.21□□□□□ -0.29
TRA2B-202ENST00000342294 SORL1Q92673 2214 aa13.2□□□□□ -0.3
TRA2B-202ENST00000342294 CSMD3Q7Z407 3707 aa13.2□□□□□ -0.3
TRA2B-202ENST00000342294 A0A1W2PPI3 338 aa13.2□□□□□ -0.3
TRA2B-202ENST00000342294 INMTO95050 263 aa13.2□□□□□ -0.3
TRA2B-202ENST00000342294 LY86O95711 162 aa13.2□□□□□ -0.3
TRA2B-202ENST00000342294 INSL3P51460 131 aa13.2□□□□□ -0.3
TRA2B-202ENST00000342294 RIDAP52758 137 aaKnown RBP13.2□□□□□ -0.3
TRA2B-202ENST00000342294 FOXE3Q13461 319 aa13.2□□□□□ -0.3
TRA2B-202ENST00000342294 UBE2V2Q15819 145 aa13.2□□□□□ -0.3
TRA2B-202ENST00000342294 CMTM5Q96DZ9 223 aa13.2□□□□□ -0.3
TRA2B-202ENST00000342294 ZMAT4Q9H898 229 aa13.2□□□□□ -0.3
TRA2B-202ENST00000342294 COPS3Q9UNS2 423 aa13.2□□□□□ -0.3
TRA2B-202ENST00000342294 H3BN98 237 aa13.19□□□□□ -0.3
TRA2B-202ENST00000342294 ENTPD6O75354 484 aa13.19□□□□□ -0.3
TRA2B-202ENST00000342294 TMEM11P17152 192 aa13.19□□□□□ -0.3
TRA2B-202ENST00000342294 CCL1P22362 96 aa13.19□□□□□ -0.3
TRA2B-202ENST00000342294 GLIPR1P48060 266 aa13.19□□□□□ -0.3
TRA2B-202ENST00000342294 NPBWR2P48146 333 aa13.19□□□□□ -0.3
TRA2B-202ENST00000342294 CDC42P60953 191 aa13.19□□□□□ -0.3
TRA2B-202ENST00000342294 RBM39Q14498 530 aaKnown RBP13.19□□□□□ -0.3
TRA2B-202ENST00000342294 GINS1Q14691 196 aa13.19□□□□□ -0.3
TRA2B-202ENST00000342294 CXorf66Q5JRM2 361 aaPredicted RBP13.19□□□□□ -0.3
TRA2B-202ENST00000342294 Q8IYB0 196 aa13.19□□□□□ -0.3
TRA2B-202ENST00000342294 ASB17Q8WXJ9 295 aa13.19□□□□□ -0.3
TRA2B-202ENST00000342294 TOMM40LQ969M1 308 aa13.19□□□□□ -0.3
TRA2B-202ENST00000342294 RPEQ96AT9 228 aa13.19□□□□□ -0.3
TRA2B-202ENST00000342294 MOB1AQ9H8S9 216 aa13.19□□□□□ -0.3
TRA2B-202ENST00000342294 RBFOX1Q9NWB1 397 aaKnown RBP13.19□□□□□ -0.3
TRA2B-202ENST00000342294 GLS2Q9UI32 602 aa13.19□□□□□ -0.3
TRA2B-202ENST00000342294 SAMHD1Q9Y3Z3 626 aaKnown RBP13.19□□□□□ -0.3
TRA2B-202ENST00000342294 STARD9Q9P2P6 4700 aa13.19□□□□□ -0.3
TRA2B-202ENST00000342294 TRBV2A0A0J9YWF9 115 aa13.18□□□□□ -0.3
TRA2B-202ENST00000342294 LOC110117498-PIK3R3F6TDL0 507 aa13.18□□□□□ -0.3
TRA2B-202ENST00000342294 AP4M1O00189 453 aa13.18□□□□□ -0.3
TRA2B-202ENST00000342294 ELANEP08246 267 aa13.18□□□□□ -0.3
TRA2B-202ENST00000342294 HCKP08631 526 aa13.18□□□□□ -0.3
TRA2B-202ENST00000342294 PRDX6P30041 224 aa13.18□□□□□ -0.3
TRA2B-202ENST00000342294 RPS7P62081 194 aaKnown RBP13.18□□□□□ -0.3
TRA2B-202ENST00000342294 GPR50Q13585 617 aa13.18□□□□□ -0.3
TRA2B-202ENST00000342294 HES1Q14469 280 aa13.18□□□□□ -0.3
TRA2B-202ENST00000342294 HNF4GQ14541 408 aa13.18□□□□□ -0.3
TRA2B-202ENST00000342294 KPNB1Q14974 876 aaKnown RBP13.18□□□□□ -0.3
TRA2B-202ENST00000342294 C17orf58Q2M2W7 97 aa13.18□□□□□ -0.3
TRA2B-202ENST00000342294 FAM58AQ8N1B3 248 aa13.18□□□□□ -0.3
TRA2B-202ENST00000342294 OR10G2Q8NGC3 310 aa13.18□□□□□ -0.3
TRA2B-202ENST00000342294 OR4D6Q8NGJ1 314 aa13.18□□□□□ -0.3
TRA2B-202ENST00000342294 OR9G1Q8NH87 305 aa13.18□□□□□ -0.3
TRA2B-202ENST00000342294 C4orf3Q8WVX3 66 aa13.18□□□□□ -0.3
TRA2B-202ENST00000342294 FEVQ99581 238 aa13.18□□□□□ -0.3
TRA2B-202ENST00000342294 TM2D3Q9BRN9 247 aa13.18□□□□□ -0.3
TRA2B-202ENST00000342294 TTTY10Q9BZA0 68 aa13.18□□□□□ -0.3
TRA2B-202ENST00000342294 REEP1Q9H902 201 aa13.18□□□□□ -0.3
TRA2B-202ENST00000342294 OR52A1Q9UKL2 312 aa13.18□□□□□ -0.3
TRA2B-202ENST00000342294 KIAA2026Q5HYC2 2103 aa13.18□□□□□ -0.3
TRA2B-202ENST00000342294 HMGN1P05114 100 aa13.17□□□□□ -0.3
TRA2B-202ENST00000342294 GPR12P47775 334 aa13.17□□□□□ -0.3
TRA2B-202ENST00000342294 FUT6P51993 359 aa13.17□□□□□ -0.3
TRA2B-202ENST00000342294 AESQ08117 197 aa13.17□□□□□ -0.3
TRA2B-202ENST00000342294 APOFQ13790 326 aa13.17□□□□□ -0.3
TRA2B-202ENST00000342294 EBI3Q14213 229 aa13.17□□□□□ -0.3
TRA2B-202ENST00000342294 DIAPH2-AS1Q14236 149 aa13.17□□□□□ -0.3
TRA2B-202ENST00000342294 SPIN3Q5JUX0 258 aa13.17□□□□□ -0.3
TRA2B-202ENST00000342294 BCL2L15Q5TBC7 163 aa13.17□□□□□ -0.3
TRA2B-202ENST00000342294 OR2T5Q6IEZ7 315 aa13.17□□□□□ -0.3
TRA2B-202ENST00000342294 OR2T29Q8NH02 315 aa13.17□□□□□ -0.3
TRA2B-202ENST00000342294 GON7Q9BXV9 100 aa13.17□□□□□ -0.3
TRA2B-202ENST00000342294 IKZF2Q9UKS7 526 aa13.17□□□□□ -0.3
TRA2B-202ENST00000342294 GTF2A1LQ9UNN4 478 aa13.17□□□□□ -0.3
TRA2B-202ENST00000342294 TMEM14AQ9Y6G1 99 aa13.17□□□□□ -0.3
TRA2B-202ENST00000342294 R4GMQ9 66 aa13.17□□□□□ -0.3
TRA2B-202ENST00000342294 ODAMA1E959 279 aa13.16□□□□□ -0.3
TRA2B-202ENST00000342294 FUOMA2VDF0 154 aa13.16□□□□□ -0.3
TRA2B-202ENST00000342294 CCDC182A6NF36 153 aa13.16□□□□□ -0.3
TRA2B-202ENST00000342294 SIRPB1O00241 398 aa13.16□□□□□ -0.3
TRA2B-202ENST00000342294 MRPL3P09001 348 aaKnown RBP13.16□□□□□ -0.3
TRA2B-202ENST00000342294 CGB3P0DN86 165 aa13.16□□□□□ -0.3
TRA2B-202ENST00000342294 CGB7P0DN87 165 aa13.16□□□□□ -0.3
TRA2B-202ENST00000342294 CALCBP10092 127 aa13.16□□□□□ -0.3
TRA2B-202ENST00000342294 BCL3P20749 454 aa13.16□□□□□ -0.3
TRA2B-202ENST00000342294 PTGFRP43088 359 aa13.16□□□□□ -0.3
TRA2B-202ENST00000342294 VEGFCP49767 419 aa13.16□□□□□ -0.3
TRA2B-202ENST00000342294 CDK5Q00535 292 aa13.16□□□□□ -0.3
TRA2B-202ENST00000342294 CFHR3Q02985 330 aa13.16□□□□□ -0.3
TRA2B-202ENST00000342294 ASPHD1Q5U4P2 390 aa13.16□□□□□ -0.3
TRA2B-202ENST00000342294 ISOC1Q96CN7 298 aa13.16□□□□□ -0.3
TRA2B-202ENST00000342294 KIRREL1Q96J84 757 aa13.16□□□□□ -0.3
TRA2B-202ENST00000342294 APOL4Q9BPW4 351 aa13.16□□□□□ -0.3
TRA2B-202ENST00000342294 ABCG5Q9H222 651 aa13.16□□□□□ -0.3
TRA2B-202ENST00000342294 AMMECR1Q9Y4X0 333 aaPredicted RBP13.16□□□□□ -0.3
TRA2B-202ENST00000342294 TCRBV5S2A0A599 114 aa13.15□□□□□ -0.3
TRA2B-202ENST00000342294 ZNF729A6NN14 1252 aaPredicted RBP13.15□□□□□ -0.3
TRA2B-202ENST00000342294 J3QR06 171 aa13.15□□□□□ -0.3
TRA2B-202ENST00000342294 MAGEB4O15481 346 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms