RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 ACTR3CQ9C0K3 210 aaPredicted RBP17.12■□□□□ 0.33
SEMA6C-201ENST00000341697 GVINP1Q7Z2Y8 2422 aa17.11■□□□□ 0.33
SEMA6C-201ENST00000341697 DHRS2Q13268 280 aa17.11■□□□□ 0.33
SEMA6C-201ENST00000341697 TMEM171Q8WVE6 324 aa17.11■□□□□ 0.33
SEMA6C-201ENST00000341697 NAA60Q9H7X0 242 aa17.11■□□□□ 0.33
SEMA6C-201ENST00000341697 ZNF205O95201 554 aa17.11■□□□□ 0.33
SEMA6C-201ENST00000341697 PPP1R1AQ13522 171 aa17.11■□□□□ 0.33
SEMA6C-201ENST00000341697 TMEM230Q96A57 120 aa17.11■□□□□ 0.33
SEMA6C-201ENST00000341697 CHCHD2Q9Y6H1 151 aaPredicted RBP17.11■□□□□ 0.33
SEMA6C-201ENST00000341697 H3BP45 60 aa17.11■□□□□ 0.33
SEMA6C-201ENST00000341697 COX5AP20674 150 aa17.11■□□□□ 0.33
SEMA6C-201ENST00000341697 CSN1S1P47710 185 aa17.11■□□□□ 0.33
SEMA6C-201ENST00000341697 SRXN1Q9BYN0 137 aa17.11■□□□□ 0.33
SEMA6C-201ENST00000341697 RAB18Q9NP72 206 aa17.11■□□□□ 0.33
SEMA6C-201ENST00000341697 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.11■□□□□ 0.33
SEMA6C-201ENST00000341697 CNOT1A5YKK6 2376 aaKnown RBP17.11■□□□□ 0.33
SEMA6C-201ENST00000341697 TGFBR3LH3BV60 316 aa17.11■□□□□ 0.33
SEMA6C-201ENST00000341697 CA10Q9NS85 328 aa17.11■□□□□ 0.33
SEMA6C-201ENST00000341697 TPRP12270 2363 aaKnown RBP17.1■□□□□ 0.33
SEMA6C-201ENST00000341697 VSIG8P0DPA2 414 aa17.1■□□□□ 0.33
SEMA6C-201ENST00000341697 GSTZ1O43708 216 aaPredicted RBP17.1■□□□□ 0.33
SEMA6C-201ENST00000341697 RTP5Q14D33 572 aa17.1■□□□□ 0.33
SEMA6C-201ENST00000341697 BAP18Q8IXM2 172 aa17.1■□□□□ 0.33
SEMA6C-201ENST00000341697 C15orf54Q8N8G6 183 aa17.1■□□□□ 0.33
SEMA6C-201ENST00000341697 ADTRPQ96IZ2 230 aa17.1■□□□□ 0.33
SEMA6C-201ENST00000341697 ATXN7O15265 892 aaPredicted RBP17.1■□□□□ 0.33
SEMA6C-201ENST00000341697 ROM1Q03395 351 aa17.1■□□□□ 0.33
SEMA6C-201ENST00000341697 TEX30Q5JUR7 227 aa17.1■□□□□ 0.33
SEMA6C-201ENST00000341697 ZBTB44Q8NCP5 570 aa17.1■□□□□ 0.33
SEMA6C-201ENST00000341697 GPR27Q9NS67 375 aa17.1■□□□□ 0.33
SEMA6C-201ENST00000341697 RPS10-NUDT3A0A1W2PQS6 291 aa17.1■□□□□ 0.33
SEMA6C-201ENST00000341697 CA11O75493 328 aa17.1■□□□□ 0.33
SEMA6C-201ENST00000341697 LINC00596Q86U02 117 aa17.1■□□□□ 0.33
SEMA6C-201ENST00000341697 OR1K1Q8NGR3 316 aa17.1■□□□□ 0.33
SEMA6C-201ENST00000341697 RFLNBQ8N5W9 214 aa17.09■□□□□ 0.33
SEMA6C-201ENST00000341697 RPS4Y2Q8TD47 263 aa17.09■□□□□ 0.33
SEMA6C-201ENST00000341697 BIN3Q9NQY0 253 aa17.09■□□□□ 0.33
SEMA6C-201ENST00000341697 LY86O95711 162 aa17.09■□□□□ 0.33
SEMA6C-201ENST00000341697 OR10J4P0C629 311 aa17.09■□□□□ 0.33
SEMA6C-201ENST00000341697 MGST1P10620 155 aaKnown RBP17.09■□□□□ 0.33
SEMA6C-201ENST00000341697 KLRB1Q12918 225 aa17.09■□□□□ 0.33
SEMA6C-201ENST00000341697 LCN15Q6UWW0 184 aa17.09■□□□□ 0.33
SEMA6C-201ENST00000341697 IGLV3-12A0A075B6K2 115 aa17.09■□□□□ 0.33
SEMA6C-201ENST00000341697 CRYM-AS1A6NIL9 109 aa17.09■□□□□ 0.33
SEMA6C-201ENST00000341697 GZMKP49863 264 aa17.09■□□□□ 0.33
SEMA6C-201ENST00000341697 MRPS11P82912 194 aaKnown RBP17.09■□□□□ 0.33
SEMA6C-201ENST00000341697 SIGLEC12Q96PQ1 595 aa17.09■□□□□ 0.33
SEMA6C-201ENST00000341697 TUBG2Q9NRH3 451 aa17.09■□□□□ 0.33
SEMA6C-201ENST00000341697 ANK1P16157 1881 aa17.09■□□□□ 0.33
SEMA6C-201ENST00000341697 CACNA1IQ9P0X4 2223 aa17.09■□□□□ 0.33
SEMA6C-201ENST00000341697 NUPL2O15504 423 aaKnown RBP17.09■□□□□ 0.33
SEMA6C-201ENST00000341697 TRAF3IP2O43734 574 aaPredicted RBP17.09■□□□□ 0.33
SEMA6C-201ENST00000341697 IGHV3-13P01766 116 aa17.09■□□□□ 0.33
SEMA6C-201ENST00000341697 IGHV3-7P01780 117 aa17.09■□□□□ 0.33
SEMA6C-201ENST00000341697 FLVCR1-AS1Q8TAF5 88 aa17.09■□□□□ 0.33
SEMA6C-201ENST00000341697 ZNF519Q8TB69 540 aa17.09■□□□□ 0.33
SEMA6C-201ENST00000341697 IMMP1LQ96LU5 166 aa17.09■□□□□ 0.33
SEMA6C-201ENST00000341697 C19orf12Q9NSK7 152 aa17.09■□□□□ 0.33
SEMA6C-201ENST00000341697 C9orf170A2RU37 121 aa17.08■□□□□ 0.33
SEMA6C-201ENST00000341697 LHX4Q969G2 390 aa17.08■□□□□ 0.33
SEMA6C-201ENST00000341697 DIRC2Q96SL1 478 aa17.08■□□□□ 0.33
SEMA6C-201ENST00000341697 TIMP4Q99727 224 aa17.08■□□□□ 0.33
SEMA6C-201ENST00000341697 IL36GQ9NZH8 169 aa17.08■□□□□ 0.33
SEMA6C-201ENST00000341697 SIRT4Q9Y6E7 314 aaPredicted RBP17.08■□□□□ 0.33
SEMA6C-201ENST00000341697 ID4P47928 161 aa17.08■□□□□ 0.33
SEMA6C-201ENST00000341697 PIGYQ3MUY2 71 aa17.08■□□□□ 0.33
SEMA6C-201ENST00000341697 MGAMO43451 1857 aa17.08■□□□□ 0.32
SEMA6C-201ENST00000341697 CHD5Q8TDI0 1954 aa17.08■□□□□ 0.32
SEMA6C-201ENST00000341697 CBR1P16152 277 aa17.08■□□□□ 0.32
SEMA6C-201ENST00000341697 TMEM11P17152 192 aa17.08■□□□□ 0.32
SEMA6C-201ENST00000341697 MUC20Q8N307 709 aaPredicted RBP17.08■□□□□ 0.32
SEMA6C-201ENST00000341697 CRYBA1P05813 215 aa17.08■□□□□ 0.32
SEMA6C-201ENST00000341697 M6PRP20645 277 aa17.08■□□□□ 0.32
SEMA6C-201ENST00000341697 UBE2G1P62253 170 aa17.08■□□□□ 0.32
SEMA6C-201ENST00000341697 ZFP36L1Q07352 338 aaKnown RBP17.08■□□□□ 0.32
SEMA6C-201ENST00000341697 SURF2Q15527 256 aaPredicted RBP17.08■□□□□ 0.32
SEMA6C-201ENST00000341697 C11orf87Q6NUJ2 197 aa17.08■□□□□ 0.32
SEMA6C-201ENST00000341697 MS4A3Q96HJ5 214 aa17.08■□□□□ 0.32
SEMA6C-201ENST00000341697 SFXN3Q9BWM7 321 aa17.08■□□□□ 0.32
SEMA6C-201ENST00000341697 MED9Q9NWA0 146 aa17.08■□□□□ 0.32
SEMA6C-201ENST00000341697 FKBP11Q9NYL4 201 aa17.08■□□□□ 0.32
SEMA6C-201ENST00000341697 NPTNQ9Y639 398 aa17.08■□□□□ 0.32
SEMA6C-201ENST00000341697 SRP14P37108 136 aaKnown RBP17.07■□□□□ 0.32
SEMA6C-201ENST00000341697 SIP14410 1827 aa17.07■□□□□ 0.32
SEMA6C-201ENST00000341697 RFPL4AA6NLU0 287 aa17.07■□□□□ 0.32
SEMA6C-201ENST00000341697 RFPL4AL1F8VTS6 287 aa17.07■□□□□ 0.32
SEMA6C-201ENST00000341697 CST7O76096 145 aa17.07■□□□□ 0.32
SEMA6C-201ENST00000341697 PMELP40967 661 aa17.07■□□□□ 0.32
SEMA6C-201ENST00000341697 HIST2H3PS2Q5TEC6 136 aa17.07■□□□□ 0.32
SEMA6C-201ENST00000341697 ACY3Q96HD9 319 aa17.07■□□□□ 0.32
SEMA6C-201ENST00000341697 ZNF703Q9H7S9 590 aaPredicted RBP17.07■□□□□ 0.32
SEMA6C-201ENST00000341697 CTSDP07339 412 aaPredicted RBP17.07■□□□□ 0.32
SEMA6C-201ENST00000341697 FGF2P09038 288 aa17.07■□□□□ 0.32
SEMA6C-201ENST00000341697 ARL16Q0P5N6 197 aa17.07■□□□□ 0.32
SEMA6C-201ENST00000341697 CEACAM21Q3KPI0 293 aa17.07■□□□□ 0.32
SEMA6C-201ENST00000341697 TOR2AQ5JU69 321 aa17.07■□□□□ 0.32
SEMA6C-201ENST00000341697 RASL12Q9NYN1 266 aa17.07■□□□□ 0.32
SEMA6C-201ENST00000341697 C17orf51A8MQB3 221 aa17.07■□□□□ 0.32
SEMA6C-201ENST00000341697 OR7C2O60412 319 aa17.07■□□□□ 0.32
SEMA6C-201ENST00000341697 TBX6O95947 436 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms