RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 PLGLB1Q02325 96 aa17.34■□□□□ 0.37
SPG7-202ENST00000341316 SAT2Q96F10 170 aaPredicted RBP17.34■□□□□ 0.37
SPG7-202ENST00000341316 IL36GQ9NZH8 169 aa17.34■□□□□ 0.37
SPG7-202ENST00000341316 RCC2Q9P258 522 aaKnown RBP17.34■□□□□ 0.37
SPG7-202ENST00000341316 EDARQ9UNE0 448 aa17.34■□□□□ 0.37
SPG7-202ENST00000341316 MED6O75586 246 aa17.33■□□□□ 0.37
SPG7-202ENST00000341316 NME2P22392 152 aa17.33■□□□□ 0.37
SPG7-202ENST00000341316 RAB13P51153 203 aa17.33■□□□□ 0.37
SPG7-202ENST00000341316 CAV2P51636 162 aa17.33■□□□□ 0.37
SPG7-202ENST00000341316 BCO1Q9HAY6 547 aa17.33■□□□□ 0.37
SPG7-202ENST00000341316 TAF9BQ9HBM6 251 aa17.33■□□□□ 0.37
SPG7-202ENST00000341316 ZFP57Q9NU63 452 aa17.33■□□□□ 0.37
SPG7-202ENST00000341316 PARPBPQ9NWS1 579 aa17.33■□□□□ 0.37
SPG7-202ENST00000341316 C5orf49A4QMS7 147 aa17.33■□□□□ 0.36
SPG7-202ENST00000341316 IFNA2P01563 188 aa17.33■□□□□ 0.36
SPG7-202ENST00000341316 HKR1P10072 659 aa17.33■□□□□ 0.36
SPG7-202ENST00000341316 DTYMKP23919 212 aa17.33■□□□□ 0.36
SPG7-202ENST00000341316 HOXA1P49639 335 aaPredicted RBP17.33■□□□□ 0.36
SPG7-202ENST00000341316 ZNF611Q8N823 705 aa17.33■□□□□ 0.36
SPG7-202ENST00000341316 OR56B2PQ8NGI1 322 aa17.33■□□□□ 0.36
SPG7-202ENST00000341316 LIPGQ9Y5X9 500 aa17.33■□□□□ 0.36
SPG7-202ENST00000341316 DOCK7Q96N67 2140 aa17.33■□□□□ 0.36
SPG7-202ENST00000341316 ZNF98A6NK75 572 aa17.32■□□□□ 0.36
SPG7-202ENST00000341316 CTSDP07339 412 aaPredicted RBP17.32■□□□□ 0.36
SPG7-202ENST00000341316 SP1P08047 785 aa17.32■□□□□ 0.36
SPG7-202ENST00000341316 MEOX1P50221 254 aa17.32■□□□□ 0.36
SPG7-202ENST00000341316 SLC25A26Q70HW3 274 aa17.32■□□□□ 0.36
SPG7-202ENST00000341316 NUFIP2Q7Z417 695 aaKnown RBP17.32■□□□□ 0.36
SPG7-202ENST00000341316 REPIN1Q9BWE0 567 aaKnown RBP17.32■□□□□ 0.36
SPG7-202ENST00000341316 RBM39Q14498 530 aaKnown RBP17.32■□□□□ 0.36
SPG7-202ENST00000341316 OR2A2Q6IF42 318 aa17.32■□□□□ 0.36
SPG7-202ENST00000341316 DHRS11Q6UWP2 260 aa17.32■□□□□ 0.36
SPG7-202ENST00000341316 MDS2Q8NDY4 140 aa17.32■□□□□ 0.36
SPG7-202ENST00000341316 ESRP2Q9H6T0 727 aaKnown RBP17.32■□□□□ 0.36
SPG7-202ENST00000341316 MEMO1Q9Y316 297 aa17.32■□□□□ 0.36
SPG7-202ENST00000341316 CRYM-AS1A6NIL9 109 aa17.31■□□□□ 0.36
SPG7-202ENST00000341316 RBM11P57052 281 aaKnown RBP17.31■□□□□ 0.36
SPG7-202ENST00000341316 NECAP2Q9NVZ3 263 aa17.31■□□□□ 0.36
SPG7-202ENST00000341316 ATPIF1Q9UII2 106 aa17.31■□□□□ 0.36
SPG7-202ENST00000341316 SPENQ96T58 3664 aaKnown RBP17.31■□□□□ 0.36
SPG7-202ENST00000341316 EP300Q09472 2414 aaPredicted RBP17.31■□□□□ 0.36
SPG7-202ENST00000341316 CFAP47Q6ZTR5 3102 aa17.31■□□□□ 0.36
SPG7-202ENST00000341316 RNASEK-C17orf49H0YIS7 233 aa17.31■□□□□ 0.36
SPG7-202ENST00000341316 AGPAT2O15120 278 aa17.31■□□□□ 0.36
SPG7-202ENST00000341316 NME2P1O60361 137 aa17.31■□□□□ 0.36
SPG7-202ENST00000341316 SFTA3P0C7M3 94 aa17.31■□□□□ 0.36
SPG7-202ENST00000341316 EIF5AP63241 154 aaKnown RBP17.31■□□□□ 0.36
SPG7-202ENST00000341316 IAH1Q2TAA2 248 aaPredicted RBP17.31■□□□□ 0.36
SPG7-202ENST00000341316 RXFP4Q8TDU9 374 aa17.31■□□□□ 0.36
SPG7-202ENST00000341316 TOMM40LQ969M1 308 aa17.31■□□□□ 0.36
SPG7-202ENST00000341316 APH1AQ96BI3 265 aa17.31■□□□□ 0.36
SPG7-202ENST00000341316 HS3ST6Q96QI5 342 aa17.31■□□□□ 0.36
SPG7-202ENST00000341316 PAPOLGQ9BWT3 736 aaKnown RBP17.31■□□□□ 0.36
SPG7-202ENST00000341316 ZNF724A8MTY0 619 aa17.3■□□□□ 0.36
SPG7-202ENST00000341316 TAAR5O14804 337 aa17.3■□□□□ 0.36
SPG7-202ENST00000341316 PDCD6O75340 191 aa17.3■□□□□ 0.36
SPG7-202ENST00000341316 NGFP01138 241 aa17.3■□□□□ 0.36
SPG7-202ENST00000341316 CRYBA1P05813 215 aa17.3■□□□□ 0.36
SPG7-202ENST00000341316 RBMXP38159 391 aaKnown RBP17.3■□□□□ 0.36
SPG7-202ENST00000341316 ECI1P42126 302 aa17.3■□□□□ 0.36
SPG7-202ENST00000341316 SPEM2Q0P670 501 aa17.3■□□□□ 0.36
SPG7-202ENST00000341316 EIF5AL1Q6IS14 154 aaKnown RBP17.3■□□□□ 0.36
SPG7-202ENST00000341316 SLC22A25Q6T423 547 aa17.3■□□□□ 0.36
SPG7-202ENST00000341316 HPSE2Q8WWQ2 592 aa17.3■□□□□ 0.36
SPG7-202ENST00000341316 CNTNAP3Q9BZ76 1288 aa17.3■□□□□ 0.36
SPG7-202ENST00000341316 C1orf123Q9NWV4 160 aa17.3■□□□□ 0.36
SPG7-202ENST00000341316 PLA2G2EQ9NZK7 142 aa17.3■□□□□ 0.36
SPG7-202ENST00000341316 PQLC2LA1A4F0 135 aa17.3■□□□□ 0.36
SPG7-202ENST00000341316 FBXO24O75426 580 aa17.3■□□□□ 0.36
SPG7-202ENST00000341316 SPP1P10451 314 aa17.3■□□□□ 0.36
SPG7-202ENST00000341316 ID4P47928 161 aa17.3■□□□□ 0.36
SPG7-202ENST00000341316 PRDX4Q13162 271 aa17.3■□□□□ 0.36
SPG7-202ENST00000341316 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.3■□□□□ 0.36
SPG7-202ENST00000341316 SGPP2Q8IWX5 399 aa17.3■□□□□ 0.36
SPG7-202ENST00000341316 TECTBQ96PL2 329 aa17.3■□□□□ 0.36
SPG7-202ENST00000341316 BIN3Q9NQY0 253 aa17.3■□□□□ 0.36
SPG7-202ENST00000341316 STARD10Q9Y365 291 aa17.3■□□□□ 0.36
SPG7-202ENST00000341316 SULT1A2P50226 295 aa17.29■□□□□ 0.36
SPG7-202ENST00000341316 PIGPP57054 158 aa17.29■□□□□ 0.36
SPG7-202ENST00000341316 TMEM268Q5VZI3 342 aa17.29■□□□□ 0.36
SPG7-202ENST00000341316 IL22RA1Q8N6P7 574 aa17.29■□□□□ 0.36
SPG7-202ENST00000341316 C2CD4CQ8TF44 421 aa17.29■□□□□ 0.36
SPG7-202ENST00000341316 GLYATL2Q8WU03 294 aa17.29■□□□□ 0.36
SPG7-202ENST00000341316 PRSS50Q9UI38 385 aa17.29■□□□□ 0.36
SPG7-202ENST00000341316 MEX3AA1L020 520 aaKnown RBP17.28■□□□□ 0.36
SPG7-202ENST00000341316 HEXAP06865 529 aa17.28■□□□□ 0.36
SPG7-202ENST00000341316 RPL12P30050 165 aaKnown RBP17.28■□□□□ 0.36
SPG7-202ENST00000341316 FXYD4P59646 89 aa17.28■□□□□ 0.36
SPG7-202ENST00000341316 RAB1AP62820 205 aa17.28■□□□□ 0.36
SPG7-202ENST00000341316 MALLQ13021 153 aa17.28■□□□□ 0.36
SPG7-202ENST00000341316 TGIF1Q15583 401 aa17.28■□□□□ 0.36
SPG7-202ENST00000341316 SP6Q3SY56 376 aa17.28■□□□□ 0.36
SPG7-202ENST00000341316 AVPI1Q5T686 147 aa17.28■□□□□ 0.36
SPG7-202ENST00000341316 BTNL8Q6UX41 500 aa17.28■□□□□ 0.36
SPG7-202ENST00000341316 ZFP82Q8N141 532 aa17.28■□□□□ 0.36
SPG7-202ENST00000341316 C12orf57Q99622 126 aa17.28■□□□□ 0.36
SPG7-202ENST00000341316 FBXL17Q9UF56 701 aa17.28■□□□□ 0.36
SPG7-202ENST00000341316 KLF13Q9Y2Y9 288 aaPredicted RBP17.28■□□□□ 0.36
SPG7-202ENST00000341316 C9JQL5 133 aa17.28■□□□□ 0.36
SPG7-202ENST00000341316 K7EPK0 472 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms