RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 F12P00748 615 aaPredicted RBP12.55□□□□□ -0.4
TDP2-201ENST00000341060 IGHV3-9P01782 118 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 CD5P06127 495 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 PDCD1Q15116 288 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 SLC25A26Q70HW3 274 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 LGI3Q8N145 548 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 CCDC71LQ8N9Z2 235 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 ERGIC1Q969X5 290 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 SMIM3Q9BZL3 60 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 ARV1Q9H2C2 271 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 LRFN1Q9P244 771 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 POMT1Q9Y6A1 747 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 FAM90A10PA6NDY2 464 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 FAM90A18PA6NE21 464 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 FAM90A16PA6NEW6 464 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 FAM90A20PA6NIJ5 464 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 FAM90A8PA6NJQ4 464 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 FAM90A7PA6NKC0 464 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 FAM90A22PA8MWA6 464 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 FAM90A12PA8MX19 464 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 FAM90A5PA8MXJ8 464 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 FAM90A23PA8MXZ1 464 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 RNASEK-C17orf49H0YIS7 233 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 H7C2Y5 167 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 DNAJC13O75165 2243 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 FAM90A15PP0C7V4 464 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 FAM90A13PP0C7W8 464 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 FAM90A14PP0C7W9 464 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 FAM90A24PP0C7X0 464 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 IL32P24001 234 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 DUSP1P28562 367 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 NPBWR1P48145 328 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 NPBWR2P48146 333 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 SPINK14Q6IE38 97 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 Q6ZRG5 221 aa12.55□□□□□ -0.4
TDP2-201ENST00000341060 ZNF703Q9H7S9 590 aaPredicted RBP12.55□□□□□ -0.4
TDP2-201ENST00000341060 DIRAS3O95661 229 aa12.54□□□□□ -0.4
TDP2-201ENST00000341060 PPYP01298 95 aa12.54□□□□□ -0.4
TDP2-201ENST00000341060 SFTA3P0C7M3 94 aa12.54□□□□□ -0.4
TDP2-201ENST00000341060 PVALBP20472 110 aaPredicted RBP12.54□□□□□ -0.4
TDP2-201ENST00000341060 AADACP22760 399 aa12.54□□□□□ -0.4
TDP2-201ENST00000341060 HERV-K104P61576 105 aa12.54□□□□□ -0.4
TDP2-201ENST00000341060 IL13RA2Q14627 380 aa12.54□□□□□ -0.4
TDP2-201ENST00000341060 FBXW12Q6X9E4 464 aa12.54□□□□□ -0.4
TDP2-201ENST00000341060 OR11L1Q8NGX0 322 aa12.54□□□□□ -0.4
TDP2-201ENST00000341060 THOC3Q96J01 351 aaKnown RBP12.54□□□□□ -0.4
TDP2-201ENST00000341060 PLSCR2Q9NRY7 297 aa12.54□□□□□ -0.4
TDP2-201ENST00000341060 SLC7A10Q9NS82 523 aa12.54□□□□□ -0.4
TDP2-201ENST00000341060 PRELID3BQ9Y3B1 194 aa12.54□□□□□ -0.4
TDP2-201ENST00000341060 TMED3Q9Y3Q3 217 aa12.54□□□□□ -0.4
TDP2-201ENST00000341060 ZNF407Q9C0G0 2248 aa12.54□□□□□ -0.4
TDP2-201ENST00000341060 PQLC2LA1A4F0 135 aa12.53□□□□□ -0.4
TDP2-201ENST00000341060 RPL36A-HNRNPH2H7BZ11 118 aa12.53□□□□□ -0.4
TDP2-201ENST00000341060 PHF1O43189 567 aaPredicted RBP12.53□□□□□ -0.4
TDP2-201ENST00000341060 NDUFA2O43678 99 aa12.53□□□□□ -0.4
TDP2-201ENST00000341060 LHX2P50458 406 aa12.53□□□□□ -0.4
TDP2-201ENST00000341060 SWI5Q1ZZU3 235 aa12.53□□□□□ -0.4
TDP2-201ENST00000341060 GPR157Q5UAW9 335 aa12.53□□□□□ -0.4
TDP2-201ENST00000341060 Q6ZS49 121 aa12.53□□□□□ -0.4
TDP2-201ENST00000341060 OR2M7Q8NG81 312 aa12.53□□□□□ -0.4
TDP2-201ENST00000341060 OR56B2PQ8NGI1 322 aa12.53□□□□□ -0.4
TDP2-201ENST00000341060 OR52M1Q8NGK5 317 aa12.53□□□□□ -0.4
TDP2-201ENST00000341060 FAM173AQ9BQD7 235 aa12.53□□□□□ -0.4
TDP2-201ENST00000341060 REPIN1Q9BWE0 567 aaKnown RBP12.53□□□□□ -0.4
TDP2-201ENST00000341060 PAPOLGQ9BWT3 736 aaKnown RBP12.53□□□□□ -0.4
TDP2-201ENST00000341060 FAM212BQ9NTI7 297 aaPredicted RBP12.53□□□□□ -0.4
TDP2-201ENST00000341060 FBXO9Q9UK97 447 aaPredicted RBP12.53□□□□□ -0.4
TDP2-201ENST00000341060 ESPL1Q14674 2120 aa12.53□□□□□ -0.4
TDP2-201ENST00000341060 FAM157AC9JC47 383 aa12.53□□□□□ -0.4
TDP2-201ENST00000341060 GPR137BO60478 399 aa12.53□□□□□ -0.4
TDP2-201ENST00000341060 NEURL1O76050 574 aa12.53□□□□□ -0.4
TDP2-201ENST00000341060 HEXAP06865 529 aa12.53□□□□□ -0.4
TDP2-201ENST00000341060 SEC11BP0C7V7 166 aa12.53□□□□□ -0.4
TDP2-201ENST00000341060 GLI4P10075 376 aa12.53□□□□□ -0.4
TDP2-201ENST00000341060 P2RY1P47900 373 aa12.53□□□□□ -0.4
TDP2-201ENST00000341060 DVL1P1P54792 670 aaPredicted RBP12.53□□□□□ -0.4
TDP2-201ENST00000341060 CLDN18P56856 261 aa12.53□□□□□ -0.4
TDP2-201ENST00000341060 ARF1P84077 181 aaKnown RBP12.53□□□□□ -0.4
TDP2-201ENST00000341060 TAAR9Q96RI9 348 aa12.53□□□□□ -0.4
TDP2-201ENST00000341060 TP53RKQ96S44 253 aa12.53□□□□□ -0.4
TDP2-201ENST00000341060 BORCS7-ASMTA0A0B4J1R7 106 aa12.52□□□□□ -0.4
TDP2-201ENST00000341060 ST8SIA3O43173 380 aa12.52□□□□□ -0.4
TDP2-201ENST00000341060 GALR2O43603 387 aaPredicted RBP12.52□□□□□ -0.4
TDP2-201ENST00000341060 ID4P47928 161 aa12.52□□□□□ -0.4
TDP2-201ENST00000341060 SRSF7Q16629 238 aaKnown RBP eCLIP12.52□□□□□ -0.4
TDP2-201ENST00000341060 IGSF11Q5DX21 431 aa12.52□□□□□ -0.4
TDP2-201ENST00000341060 CLEC9AQ6UXN8 241 aa12.52□□□□□ -0.4
TDP2-201ENST00000341060 RAB11FIP2Q7L804 512 aa12.52□□□□□ -0.4
TDP2-201ENST00000341060 FAM185AQ8N0U4 392 aa12.52□□□□□ -0.4
TDP2-201ENST00000341060 SLC35G3Q8N808 338 aa12.52□□□□□ -0.4
TDP2-201ENST00000341060 HPSE2Q8WWQ2 592 aa12.52□□□□□ -0.4
TDP2-201ENST00000341060 EXTL1Q92935 676 aa12.52□□□□□ -0.4
TDP2-201ENST00000341060 GINS3Q9BRX5 216 aa12.52□□□□□ -0.4
TDP2-201ENST00000341060 DDA1Q9BW61 102 aa12.52□□□□□ -0.4
TDP2-201ENST00000341060 SPRY4Q9C004 299 aa12.52□□□□□ -0.4
TDP2-201ENST00000341060 STRADBQ9C0K7 418 aa12.52□□□□□ -0.4
TDP2-201ENST00000341060 FAM86C1Q9NVL1 165 aa12.52□□□□□ -0.4
TDP2-201ENST00000341060 B4GALT7Q9UBV7 327 aa12.52□□□□□ -0.4
TDP2-201ENST00000341060 ZDHHC8Q9ULC8 765 aa12.52□□□□□ -0.4
TDP2-201ENST00000341060 AGPAT2O15120 278 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms