RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 F8VWA3 439 aa13.14□□□□□ -0.31
BRAT1-201ENST00000340611 M0R143 59 aa13.14□□□□□ -0.31
BRAT1-201ENST00000340611 PNPP00491 289 aa13.14□□□□□ -0.31
BRAT1-201ENST00000340611 CD46P15529 392 aa13.14□□□□□ -0.31
BRAT1-201ENST00000340611 FGF7P21781 194 aa13.14□□□□□ -0.31
BRAT1-201ENST00000340611 CLDN17P56750 224 aa13.14□□□□□ -0.31
BRAT1-201ENST00000340611 ZNF616Q08AN1 781 aa13.14□□□□□ -0.31
BRAT1-201ENST00000340611 UBE2V2Q15819 145 aa13.14□□□□□ -0.31
BRAT1-201ENST00000340611 UEVLDQ8IX04 471 aa13.14□□□□□ -0.31
BRAT1-201ENST00000340611 OR51A2Q8NGJ7 313 aa13.14□□□□□ -0.31
BRAT1-201ENST00000340611 OR1J1Q8NGS3 322 aa13.14□□□□□ -0.31
BRAT1-201ENST00000340611 OR10D3Q8NH80 312 aa13.14□□□□□ -0.31
BRAT1-201ENST00000340611 HAS2Q92819 552 aa13.14□□□□□ -0.31
BRAT1-201ENST00000340611 TAS2R4Q9NYW5 299 aa13.14□□□□□ -0.31
BRAT1-201ENST00000340611 B9D1Q9UPM9 204 aa13.14□□□□□ -0.31
BRAT1-201ENST00000340611 NCOA6Q14686 2063 aaPredicted RBP13.14□□□□□ -0.31
BRAT1-201ENST00000340611 TRAF3IP2O43734 574 aaPredicted RBP13.14□□□□□ -0.31
BRAT1-201ENST00000340611 SCAF4O95104 1147 aaKnown RBP13.14□□□□□ -0.31
BRAT1-201ENST00000340611 AKR1C4P17516 323 aa13.14□□□□□ -0.31
BRAT1-201ENST00000340611 PSMB6P28072 239 aa13.14□□□□□ -0.31
BRAT1-201ENST00000340611 CDAP32320 146 aa13.14□□□□□ -0.31
BRAT1-201ENST00000340611 NTF4P34130 210 aa13.14□□□□□ -0.31
BRAT1-201ENST00000340611 TDGF1P3P51864 188 aa13.14□□□□□ -0.31
BRAT1-201ENST00000340611 GFRA1P56159 465 aa13.14□□□□□ -0.31
BRAT1-201ENST00000340611 GVQW1Q8N7I0 195 aa13.14□□□□□ -0.31
BRAT1-201ENST00000340611 R3HDM4Q96D70 268 aa13.14□□□□□ -0.31
BRAT1-201ENST00000340611 CMBLQ96DG6 245 aa13.14□□□□□ -0.31
BRAT1-201ENST00000340611 INTS14Q96SY0 518 aa13.14□□□□□ -0.31
BRAT1-201ENST00000340611 HDGFL3Q9Y3E1 203 aa13.14□□□□□ -0.31
BRAT1-201ENST00000340611 SPTA1P02549 2419 aa13.14□□□□□ -0.31
BRAT1-201ENST00000340611 ADAP1O75689 374 aa13.13□□□□□ -0.31
BRAT1-201ENST00000340611 TSPAN15O95858 294 aa13.13□□□□□ -0.31
BRAT1-201ENST00000340611 GZMBP10144 247 aa13.13□□□□□ -0.31
BRAT1-201ENST00000340611 ZNF43P17038 809 aa13.13□□□□□ -0.31
BRAT1-201ENST00000340611 RPL29P47914 159 aaKnown RBP13.13□□□□□ -0.31
BRAT1-201ENST00000340611 SLC25A1P53007 311 aa13.13□□□□□ -0.31
BRAT1-201ENST00000340611 ADAM8P78325 824 aa13.13□□□□□ -0.31
BRAT1-201ENST00000340611 IL13RA1P78552 427 aa13.13□□□□□ -0.31
BRAT1-201ENST00000340611 HIST2H3PS2Q5TEC6 136 aa13.13□□□□□ -0.31
BRAT1-201ENST00000340611 C1QL4Q86Z23 238 aa13.13□□□□□ -0.31
BRAT1-201ENST00000340611 NEK7Q8TDX7 302 aa13.13□□□□□ -0.31
BRAT1-201ENST00000340611 GALNT14Q96FL9 552 aa13.13□□□□□ -0.31
BRAT1-201ENST00000340611 SMIM8Q96KF7 97 aa13.13□□□□□ -0.31
BRAT1-201ENST00000340611 SNX22Q96L94 193 aa13.13□□□□□ -0.31
BRAT1-201ENST00000340611 HIST1H2BLQ99880 126 aa13.13□□□□□ -0.31
BRAT1-201ENST00000340611 PRR13Q9NZ81 148 aa13.13□□□□□ -0.31
BRAT1-201ENST00000340611 TEX13DA0A0J9YY54 714 aaPredicted RBP13.13□□□□□ -0.31
BRAT1-201ENST00000340611 HSPA12AO43301 675 aa13.13□□□□□ -0.31
BRAT1-201ENST00000340611 MPZP25189 248 aa13.13□□□□□ -0.31
BRAT1-201ENST00000340611 HTR2CP28335 458 aa13.13□□□□□ -0.31
BRAT1-201ENST00000340611 SOX8P57073 446 aa13.13□□□□□ -0.31
BRAT1-201ENST00000340611 SCAND1P57086 179 aa13.13□□□□□ -0.31
BRAT1-201ENST00000340611 CARD18P57730 90 aa13.13□□□□□ -0.31
BRAT1-201ENST00000340611 SPOCK1Q08629 439 aa13.13□□□□□ -0.31
BRAT1-201ENST00000340611 PMPCAQ10713 525 aa13.13□□□□□ -0.31
BRAT1-201ENST00000340611 RNF151Q2KHN1 245 aa13.13□□□□□ -0.31
BRAT1-201ENST00000340611 ADAD2Q8NCV1 583 aaKnown RBP13.13□□□□□ -0.31
BRAT1-201ENST00000340611 SNIP1Q8TAD8 396 aaKnown RBP13.13□□□□□ -0.31
BRAT1-201ENST00000340611 RNASE8Q8TDE3 154 aaKnown RBP13.13□□□□□ -0.31
BRAT1-201ENST00000340611 ABHD3Q8WU67 409 aa13.13□□□□□ -0.31
BRAT1-201ENST00000340611 DIRC2Q96SL1 478 aa13.13□□□□□ -0.31
BRAT1-201ENST00000340611 SMIM3Q9BZL3 60 aa13.13□□□□□ -0.31
BRAT1-201ENST00000340611 KLF13Q9Y2Y9 288 aaPredicted RBP13.13□□□□□ -0.31
BRAT1-201ENST00000340611 AQP7P3A6NL99 342 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 GEMIN2O14893 280 aaKnown RBP13.12□□□□□ -0.31
BRAT1-201ENST00000340611 IL18BPO95998 194 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 MELTFP08582 738 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 TRGC1P0CF51 173 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 ZBTB25P24278 435 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 SLC35A1P78382 337 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 EGR3Q06889 387 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 FAM189A2Q15884 450 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 LYG2Q86SG7 212 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 LINC00346Q8IVM7 164 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 SPACA3Q8IXA5 215 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 NOL4LQ96MY1 436 aaPredicted RBP13.12□□□□□ -0.31
BRAT1-201ENST00000340611 MRPL22Q9NWU5 206 aaKnown RBP13.12□□□□□ -0.31
BRAT1-201ENST00000340611 GTF3C1Q12789 2109 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 H0YIZ8 118 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 KLRC4-KLRK1H3BQV0 150 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 PTBP3O95758 552 aaKnown RBP13.12□□□□□ -0.31
BRAT1-201ENST00000340611 CEACAM6P40199 344 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 H3F3AP84243 136 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 MFGE8Q08431 387 aaPredicted RBP13.12□□□□□ -0.31
BRAT1-201ENST00000340611 GUK1Q16774 197 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 PHYHD1Q5SRE7 291 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 DEGS2Q6QHC5 323 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 VHLLQ6RSH7 139 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 BTNL8Q6UX41 500 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 DRAM2Q6UX65 266 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 ZNF584Q8IVC4 421 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 Q8WTZ3 238 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 ELOVL1Q9BW60 279 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 TAF9BQ9HBM6 251 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 DHDHQ9UQ10 334 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 MRPS18CQ9Y3D5 142 aaKnown RBP13.12□□□□□ -0.31
BRAT1-201ENST00000340611 TGOLN2O43493 480 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 IGHV3-9P01782 118 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 CRHP06850 196 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 PGA3P0DJD8 388 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms