RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 CEACAM21Q3KPI0 293 aa11.12□□□□□ -0.63
LIN54-201ENST00000340417 PRR30Q53SZ7 412 aaPredicted RBP11.12□□□□□ -0.63
LIN54-201ENST00000340417 POC1BQ8TC44 478 aa11.12□□□□□ -0.63
LIN54-201ENST00000340417 ZNF488Q96MN9 340 aa11.12□□□□□ -0.63
LIN54-201ENST00000340417 TRAF3IP2O43734 574 aaPredicted RBP11.12□□□□□ -0.63
LIN54-201ENST00000340417 IL18BPO95998 194 aa11.12□□□□□ -0.63
LIN54-201ENST00000340417 AADACL4Q5VUY2 407 aa11.12□□□□□ -0.63
LIN54-201ENST00000340417 ACSM6Q6P461 480 aa11.12□□□□□ -0.63
LIN54-201ENST00000340417 OR13F1Q8NGS4 319 aa11.12□□□□□ -0.63
LIN54-201ENST00000340417 GRAMD2BQ96HH9 432 aa11.12□□□□□ -0.63
LIN54-201ENST00000340417 KRASP01116 189 aa11.11□□□□□ -0.63
LIN54-201ENST00000340417 TMEM54Q969K7 222 aa11.11□□□□□ -0.63
LIN54-201ENST00000340417 SEBOXQ9HB31 216 aaPredicted RBP11.11□□□□□ -0.63
LIN54-201ENST00000340417 PLEKHB1Q9UF11 243 aaPredicted RBP11.11□□□□□ -0.63
LIN54-201ENST00000340417 CEPT1Q9Y6K0 416 aa11.11□□□□□ -0.63
LIN54-201ENST00000340417 TFAP2AP05549 437 aa11.11□□□□□ -0.63
LIN54-201ENST00000340417 CLINT1Q14677 625 aa11.11□□□□□ -0.63
LIN54-201ENST00000340417 MMDQ15546 238 aa11.11□□□□□ -0.63
LIN54-201ENST00000340417 NANPQ8TBE9 248 aa11.11□□□□□ -0.63
LIN54-201ENST00000340417 ACY3Q96HD9 319 aa11.11□□□□□ -0.63
LIN54-201ENST00000340417 FKBP11Q9NYL4 201 aa11.11□□□□□ -0.63
LIN54-201ENST00000340417 SEMA5BQ9P283 1151 aa11.11□□□□□ -0.63
LIN54-201ENST00000340417 LY6G6EA0A0G2JKS1 128 aa11.11□□□□□ -0.63
LIN54-201ENST00000340417 ZNF785A8K8V0 405 aa11.11□□□□□ -0.63
LIN54-201ENST00000340417 HIST1H1DP16402 221 aaKnown RBP11.11□□□□□ -0.63
LIN54-201ENST00000340417 PDZK1IP1Q13113 114 aa11.11□□□□□ -0.63
LIN54-201ENST00000340417 OR2T6Q8NHC8 308 aa11.11□□□□□ -0.63
LIN54-201ENST00000340417 SIRT7Q9NRC8 400 aa11.11□□□□□ -0.63
LIN54-201ENST00000340417 ZNF230Q9UIE0 474 aaPredicted RBP11.11□□□□□ -0.63
LIN54-201ENST00000340417 U3KQA8 63 aa11.11□□□□□ -0.63
LIN54-201ENST00000340417 CACNA1HO95180 2353 aa11.11□□□□□ -0.63
LIN54-201ENST00000340417 TMEM229AB2RXF0 380 aa11.11□□□□□ -0.63
LIN54-201ENST00000340417 BAMBIQ13145 260 aa11.11□□□□□ -0.63
LIN54-201ENST00000340417 GK2Q14410 553 aaPredicted RBP11.11□□□□□ -0.63
LIN54-201ENST00000340417 SMIM15Q7Z3B0 74 aa11.11□□□□□ -0.63
LIN54-201ENST00000340417 CIB3Q96Q77 187 aaPredicted RBP11.11□□□□□ -0.63
LIN54-201ENST00000340417 DCTN5Q9BTE1 182 aa11.11□□□□□ -0.63
LIN54-201ENST00000340417 DUSP21Q9H596 190 aa11.11□□□□□ -0.63
LIN54-201ENST00000340417 RNF167Q9H6Y7 350 aa11.11□□□□□ -0.63
LIN54-201ENST00000340417 GEMIN2O14893 280 aaKnown RBP11.11□□□□□ -0.63
LIN54-201ENST00000340417 PLPP2O43688 288 aa11.11□□□□□ -0.63
LIN54-201ENST00000340417 PI3P19957 117 aa11.11□□□□□ -0.63
LIN54-201ENST00000340417 RFX2P48378 723 aa11.11□□□□□ -0.63
LIN54-201ENST00000340417 LSM11P83369 360 aaKnown RBP eCLIP11.11□□□□□ -0.63
LIN54-201ENST00000340417 DEFA5Q01523 94 aa11.11□□□□□ -0.63
LIN54-201ENST00000340417 SPAG16Q8N0X2 631 aa11.11□□□□□ -0.63
LIN54-201ENST00000340417 OR10AC1Q8NH08 325 aa11.11□□□□□ -0.63
LIN54-201ENST00000340417 VSTM2AQ8TAG5 236 aa11.11□□□□□ -0.63
LIN54-201ENST00000340417 UHRF2Q96PU4 802 aa11.11□□□□□ -0.63
LIN54-201ENST00000340417 CHST5Q9GZS9 411 aa11.11□□□□□ -0.63
LIN54-201ENST00000340417 SULT1C2O00338 296 aa11.1□□□□□ -0.63
LIN54-201ENST00000340417 TSPAN15O95858 294 aa11.1□□□□□ -0.63
LIN54-201ENST00000340417 MAGEB1P43366 347 aa11.1□□□□□ -0.63
LIN54-201ENST00000340417 GATA6Q92908 595 aa11.1□□□□□ -0.63
LIN54-201ENST00000340417 C7orf69Q9H7B7 122 aa11.1□□□□□ -0.63
LIN54-201ENST00000340417 TMEM272A0A1B0GTI8 110 aa11.1□□□□□ -0.63
LIN54-201ENST00000340417 ERGIC1Q969X5 290 aa11.1□□□□□ -0.63
LIN54-201ENST00000340417 WNT5BQ9H1J7 359 aa11.1□□□□□ -0.63
LIN54-201ENST00000340417 CSAG2Q9Y5P2 127 aa11.1□□□□□ -0.63
LIN54-201ENST00000340417 MGST3O14880 152 aa11.1□□□□□ -0.63
LIN54-201ENST00000340417 LIPFP07098 398 aa11.1□□□□□ -0.63
LIN54-201ENST00000340417 IAPPP10997 89 aa11.1□□□□□ -0.63
LIN54-201ENST00000340417 DSCR9P59020 149 aa11.1□□□□□ -0.63
LIN54-201ENST00000340417 MPV17LQ2QL34 196 aa11.1□□□□□ -0.63
LIN54-201ENST00000340417 C20orf204Q6ZNR8 217 aa11.1□□□□□ -0.63
LIN54-201ENST00000340417 MFFQ9GZY8 342 aa11.1□□□□□ -0.63
LIN54-201ENST00000340417 TMEM106BQ9NUM4 274 aa11.1□□□□□ -0.63
LIN54-201ENST00000340417 METRNQ9UJH8 293 aa11.1□□□□□ -0.63
LIN54-201ENST00000340417 PF4P02776 101 aa11.1□□□□□ -0.63
LIN54-201ENST00000340417 RAB6AP20340 208 aa11.1□□□□□ -0.63
LIN54-201ENST00000340417 S100PP25815 95 aa11.1□□□□□ -0.63
LIN54-201ENST00000340417 PMELP40967 661 aa11.1□□□□□ -0.63
LIN54-201ENST00000340417 MARVELD3Q96A59 401 aa11.1□□□□□ -0.63
LIN54-201ENST00000340417 TAF9BQ9HBM6 251 aa11.1□□□□□ -0.63
LIN54-201ENST00000340417 STRAPQ9Y3F4 350 aaKnown RBP11.1□□□□□ -0.63
LIN54-201ENST00000340417 NYNRINQ9P2P1 1898 aaKnown RBP11.1□□□□□ -0.63
LIN54-201ENST00000340417 IGHV2OR16-5A0A0B4J2B6 119 aa11.1□□□□□ -0.63
LIN54-201ENST00000340417 LINC00596Q86U02 117 aa11.1□□□□□ -0.63
LIN54-201ENST00000340417 MDS2Q8NDY4 140 aa11.1□□□□□ -0.63
LIN54-201ENST00000340417 RTN4IP1Q8WWV3 396 aaPredicted RBP11.1□□□□□ -0.63
LIN54-201ENST00000340417 FRRS1LQ9P0K9 344 aa11.1□□□□□ -0.63
LIN54-201ENST00000340417 A0A1W2PN81 502 aa11.09□□□□□ -0.63
LIN54-201ENST00000340417 PROB1E7EW31 1015 aa11.09□□□□□ -0.63
LIN54-201ENST00000340417 IL7P13232 177 aa11.09□□□□□ -0.63
LIN54-201ENST00000340417 CHRNA7P36544 502 aa11.09□□□□□ -0.63
LIN54-201ENST00000340417 REG1BP48304 166 aa11.09□□□□□ -0.63
LIN54-201ENST00000340417 SUMF2Q8NBJ7 301 aa11.09□□□□□ -0.63
LIN54-201ENST00000340417 SSBP3Q9BWW4 388 aaPredicted RBP11.09□□□□□ -0.63
LIN54-201ENST00000340417 RAMP1O60894 148 aa11.09□□□□□ -0.63
LIN54-201ENST00000340417 PF4V1P10720 104 aa11.09□□□□□ -0.63
LIN54-201ENST00000340417 OPRK1P41145 380 aa11.09□□□□□ -0.63
LIN54-201ENST00000340417 CCR6P51684 374 aa11.09□□□□□ -0.63
LIN54-201ENST00000340417 BPIFB3P59826 476 aa11.09□□□□□ -0.63
LIN54-201ENST00000340417 KCNMB1Q16558 191 aa11.09□□□□□ -0.63
LIN54-201ENST00000340417 OR10P1Q8NGE3 313 aa11.09□□□□□ -0.63
LIN54-201ENST00000340417 OR4S2Q8NH73 311 aa11.09□□□□□ -0.63
LIN54-201ENST00000340417 PIPOXQ9P0Z9 390 aa11.09□□□□□ -0.63
LIN54-201ENST00000340417 PIKFYVEQ9Y2I7 2098 aa11.09□□□□□ -0.63
LIN54-201ENST00000340417 A0A0U1RQV5 110 aa11.09□□□□□ -0.63
LIN54-201ENST00000340417 LRRC3CA6NJW4 275 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms