RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 MLNRO43193 412 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 RGS11O94810 467 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 GIPP09681 153 aaPredicted RBP6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 PPP3CBP16298 524 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 CEBPDP49716 269 aaPredicted RBP6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 ZNF83P51522 516 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 FXYD4P59646 89 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 ARPC4P59998 168 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 GNG3P63215 75 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 ANKRD55Q3KP44 614 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 SLC22A25Q6T423 547 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 Q6ZR03 302 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 ARRDC1Q8N5I2 433 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 ZDHHC22Q8N966 263 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 Q8NFD4 153 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 OR8H1Q8NGG4 311 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 UBALD1Q8TB05 177 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 TOMM40LQ969M1 308 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 ELMOD3Q96FG2 381 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 FXYD6Q9H0Q3 95 aa6.3□□□□□ -1.4
SRFBP1-201ENST00000339397 CHD3Q12873 2000 aaKnown RBP6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 ABCA4P78363 2273 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 TRAV24A0A0B4J272 114 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 EEF1E1-BLOC1S5C9J1V9 151 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 K7ENP7 123 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 WNT9BO14905 357 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 IL2RAP01589 272 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 SCTP09683 121 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 PGAM2P15259 253 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 RPS2P15880 293 aaKnown RBP6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 RCC1P18754 421 aaPredicted RBP6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 TBPP20226 339 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 HOXC12P31275 282 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 FGF12P61328 243 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 ATXN7L3Q14CW9 347 aaPredicted RBP6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 FAM189A2Q15884 450 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 SP6Q3SY56 376 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 SPRNQ5BIV9 151 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 ZNF324BQ6AW86 544 aaPredicted RBP6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 OR2A2Q6IF42 318 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 BHLHA15Q7RTS1 189 aaPredicted RBP6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 DOLPP1Q86YN1 238 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 MITD1Q8WV92 249 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 SNRNP40Q96DI7 357 aaKnown RBP6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 MRPS24Q96EL2 167 aaKnown RBP6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 CPNE2Q96FN4 548 aaPredicted RBP6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 UFSP2Q9NUQ7 469 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 ASF1BQ9NVP2 202 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 IGHV2OR16-5A0A0B4J2B6 119 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 C13orf42A0A1B0GVH6 325 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 OR5H1A6NKK0 313 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 MCRIP1C9JLW8 97 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 ATXN7O15265 892 aaPredicted RBP6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 FCGR2CP31995 323 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 HTR2BP41595 481 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 CBX5P45973 191 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 TAS2R46P59540 309 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 RAP2BP61225 183 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 TMEM128Q5BJH2 165 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 BEX5Q5H9J7 111 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 FAM180AQ6UWF9 173 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 PEG10Q86TG7 708 aaKnown RBP6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 MKXQ8IYA7 352 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 OR11L1Q8NGX0 322 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 TECTBQ96PL2 329 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 TRAF4Q9BUZ4 470 aaPredicted RBP6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 SLA2Q9H6Q3 261 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 MYOZ1Q9NP98 299 aaPredicted RBP6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 SLC25A15Q9Y619 301 aa6.29□□□□□ -1.4
SRFBP1-201ENST00000339397 CEACAM18A8MTB9 384 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 CNOT4O95628 575 aaKnown RBP6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 SCGB1D2O95969 90 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 TDGF1P3P51864 188 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 MRPL49Q13405 166 aaKnown RBP6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 SNTB1Q13884 538 aaKnown RBP6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 HERPUD1Q15011 391 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 FAM76BQ5HYJ3 339 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 C1orf185Q5T7R7 199 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 ELP2Q6IA86 826 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 VHLLQ6RSH7 139 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 TEX261Q6UWH6 196 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 DPPA2Q7Z7J5 298 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 TMEM200AQ86VY9 491 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 SUMF2Q8NBJ7 301 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 OR5M8Q8NGP6 311 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 NEK7Q8TDX7 302 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 PPP1R1CQ8WVI7 109 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 ADAT1Q9BUB4 502 aaKnown RBP6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 GON7Q9BXV9 100 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 OBP2BQ9NPH6 170 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 DUSP13Q9UII6 198 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 MPC1Q9Y5U8 109 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 U3KQ87 197 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 SPTBN1Q01082 2364 aaKnown RBP6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 IGKV1-6A0A0C4DH72 117 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 DBX1A6NMT0 343 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 M0R1B8 84 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 ERVH48-1M5A8F1 160 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 BET1O15155 118 aa6.28□□□□□ -1.4
SRFBP1-201ENST00000339397 DUS4LO95620 317 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms