RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 GSTK1Q9Y2Q3 226 aa12.45□□□□□ -0.42
PRKN-201ENST00000338468 C17orf98A8MV24 154 aa12.44□□□□□ -0.42
PRKN-201ENST00000338468 SIRPB1O00241 398 aa12.44□□□□□ -0.42
PRKN-201ENST00000338468 OR2H2O95918 312 aa12.44□□□□□ -0.42
PRKN-201ENST00000338468 IGHV4-59P01825 116 aa12.44□□□□□ -0.42
PRKN-201ENST00000338468 ALDOBP05062 364 aa12.44□□□□□ -0.42
PRKN-201ENST00000338468 CD2P06729 351 aa12.44□□□□□ -0.42
PRKN-201ENST00000338468 TMEM225BP0DP42 221 aa12.44□□□□□ -0.42
PRKN-201ENST00000338468 MYF6P23409 242 aa12.44□□□□□ -0.42
PRKN-201ENST00000338468 GABRR1P24046 479 aa12.44□□□□□ -0.42
PRKN-201ENST00000338468 LMO1P25800 156 aa12.44□□□□□ -0.42
PRKN-201ENST00000338468 IER3P46695 156 aa12.44□□□□□ -0.42
PRKN-201ENST00000338468 WNT4P56705 351 aa12.44□□□□□ -0.42
PRKN-201ENST00000338468 EDDM3BP56851 147 aa12.44□□□□□ -0.42
PRKN-201ENST00000338468 GRK1Q15835 563 aa12.44□□□□□ -0.42
PRKN-201ENST00000338468 YIF1BQ5BJH7 314 aa12.44□□□□□ -0.42
PRKN-201ENST00000338468 RNLSQ5VYX0 342 aa12.44□□□□□ -0.42
PRKN-201ENST00000338468 FIP1L1Q6UN15 594 aaKnown RBP12.44□□□□□ -0.42
PRKN-201ENST00000338468 ASCL4Q6XD76 172 aa12.44□□□□□ -0.42
PRKN-201ENST00000338468 GDPD3Q7L5L3 318 aa12.44□□□□□ -0.42
PRKN-201ENST00000338468 TPRX1Q8N7U7 411 aa12.44□□□□□ -0.42
PRKN-201ENST00000338468 PXT1Q8NFP0 134 aa12.44□□□□□ -0.42
PRKN-201ENST00000338468 TBC1D15Q8TC07 691 aa12.44□□□□□ -0.42
PRKN-201ENST00000338468 RHOFQ9HBH0 211 aa12.44□□□□□ -0.42
PRKN-201ENST00000338468 TRAV8-7A0A075B6U6 113 aa12.43□□□□□ -0.42
PRKN-201ENST00000338468 TRBV5-7A0A0A0MS05 114 aa12.43□□□□□ -0.42
PRKN-201ENST00000338468 PNMA8CA0A1B0GUJ8 204 aa12.43□□□□□ -0.42
PRKN-201ENST00000338468 A0A1W2PPH5 198 aa12.43□□□□□ -0.42
PRKN-201ENST00000338468 MEIOCA2RUB1 952 aa12.43□□□□□ -0.42
PRKN-201ENST00000338468 MAGEA13PA6NCF6 341 aa12.43□□□□□ -0.42
PRKN-201ENST00000338468 GPX5O75715 221 aa12.43□□□□□ -0.42
PRKN-201ENST00000338468 CD1AP06126 327 aa12.43□□□□□ -0.42
PRKN-201ENST00000338468 EEF1B2P24534 225 aaKnown RBP12.43□□□□□ -0.42
PRKN-201ENST00000338468 OR3A4PP47883 348 aa12.43□□□□□ -0.42
PRKN-201ENST00000338468 TAS2R43P59537 309 aa12.43□□□□□ -0.42
PRKN-201ENST00000338468 MEF2CQ06413 473 aaPredicted RBP12.43□□□□□ -0.42
PRKN-201ENST00000338468 ACSM1Q08AH1 577 aa12.43□□□□□ -0.42
PRKN-201ENST00000338468 EDDM3AQ14507 147 aa12.43□□□□□ -0.42
PRKN-201ENST00000338468 Q499Y3 187 aa12.43□□□□□ -0.42
PRKN-201ENST00000338468 PDLIM3Q53GG5 364 aaPredicted RBP12.43□□□□□ -0.42
PRKN-201ENST00000338468 ELP2Q6IA86 826 aa12.43□□□□□ -0.42
PRKN-201ENST00000338468 SATL1Q86VE3 508 aa12.43□□□□□ -0.42
PRKN-201ENST00000338468 Q8NFD4 153 aa12.43□□□□□ -0.42
PRKN-201ENST00000338468 TNFAIP8L1Q8WVP5 186 aa12.43□□□□□ -0.42
PRKN-201ENST00000338468 SSMEM1Q8WWF3 244 aa12.43□□□□□ -0.42
PRKN-201ENST00000338468 ANKRD60Q9BZ19 345 aa12.43□□□□□ -0.42
PRKN-201ENST00000338468 EXOSC4Q9NPD3 245 aaKnown RBP12.43□□□□□ -0.42
PRKN-201ENST00000338468 ZNRD1Q9P1U0 126 aa12.43□□□□□ -0.42
PRKN-201ENST00000338468 LSM2Q9Y333 95 aaKnown RBP12.43□□□□□ -0.42
PRKN-201ENST00000338468 SF3B6Q9Y3B4 125 aaKnown RBP12.43□□□□□ -0.42
PRKN-201ENST00000338468 POMT1Q9Y6A1 747 aa12.43□□□□□ -0.42
PRKN-201ENST00000338468 A0A0G2JK05 382 aa12.42□□□□□ -0.42
PRKN-201ENST00000338468 FAM181BA6NEQ2 426 aa12.42□□□□□ -0.42
PRKN-201ENST00000338468 PTGES3LE9PB15 166 aa12.42□□□□□ -0.42
PRKN-201ENST00000338468 SH2D1BO14796 132 aa12.42□□□□□ -0.42
PRKN-201ENST00000338468 MGST3O14880 152 aa12.42□□□□□ -0.42
PRKN-201ENST00000338468 MYL12BO14950 172 aa12.42□□□□□ -0.42
PRKN-201ENST00000338468 PIN1P1O15428 100 aa12.42□□□□□ -0.42
PRKN-201ENST00000338468 ZNF728P0DKX0 622 aa12.42□□□□□ -0.42
PRKN-201ENST00000338468 CELP19835 753 aa12.42□□□□□ -0.42
PRKN-201ENST00000338468 ERP29P30040 261 aaKnown RBP12.42□□□□□ -0.42
PRKN-201ENST00000338468 MTNR1BP49286 362 aa12.42□□□□□ -0.42
PRKN-201ENST00000338468 SLC35A2P78381 396 aa12.42□□□□□ -0.42
PRKN-201ENST00000338468 IRF3Q14653 427 aa12.42□□□□□ -0.42
PRKN-201ENST00000338468 TAF9Q16594 264 aa12.42□□□□□ -0.42
PRKN-201ENST00000338468 ZNF782Q6ZMW2 699 aaPredicted RBP12.42□□□□□ -0.42
PRKN-201ENST00000338468 OR10K1Q8NGX5 313 aa12.42□□□□□ -0.42
PRKN-201ENST00000338468 OR14A2Q96R54 314 aa12.42□□□□□ -0.42
PRKN-201ENST00000338468 OR5M11Q96RB7 305 aa12.42□□□□□ -0.42
PRKN-201ENST00000338468 CDCA4Q9BXL8 241 aa12.42□□□□□ -0.42
PRKN-201ENST00000338468 TMEM138Q9NPI0 162 aa12.42□□□□□ -0.42
PRKN-201ENST00000338468 GLS2Q9UI32 602 aa12.42□□□□□ -0.42
PRKN-201ENST00000338468 FAM96BQ9Y3D0 163 aa12.42□□□□□ -0.42
PRKN-201ENST00000338468 PCDHGB5Q9Y5G0 923 aa12.42□□□□□ -0.42
PRKN-201ENST00000338468 A0A1W2PPK0 400 aa12.41□□□□□ -0.42
PRKN-201ENST00000338468 SLC33A1O00400 549 aaPredicted RBP12.41□□□□□ -0.42
PRKN-201ENST00000338468 MAGEB3O15480 346 aa12.41□□□□□ -0.42
PRKN-201ENST00000338468 CDRT1O95170 752 aa12.41□□□□□ -0.42
PRKN-201ENST00000338468 RBP4P02753 201 aa12.41□□□□□ -0.42
PRKN-201ENST00000338468 FBP1P09467 338 aa12.41□□□□□ -0.42
PRKN-201ENST00000338468 FSTP19883 344 aa12.41□□□□□ -0.42
PRKN-201ENST00000338468 COX7A1P24310 79 aa12.41□□□□□ -0.42
PRKN-201ENST00000338468 PAX6P26367 422 aa12.41□□□□□ -0.42
PRKN-201ENST00000338468 BDKRB2P30411 391 aa12.41□□□□□ -0.42
PRKN-201ENST00000338468 PTGFRP43088 359 aa12.41□□□□□ -0.42
PRKN-201ENST00000338468 BMXP51813 675 aa12.41□□□□□ -0.42
PRKN-201ENST00000338468 P2RX3P56373 397 aa12.41□□□□□ -0.42
PRKN-201ENST00000338468 PPP3R1P63098 170 aa12.41□□□□□ -0.42
PRKN-201ENST00000338468 RELBQ01201 579 aa12.41□□□□□ -0.42
PRKN-201ENST00000338468 MIDNQ504T8 468 aa12.41□□□□□ -0.42
PRKN-201ENST00000338468 DDI2Q5TDH0 399 aa12.41□□□□□ -0.42
PRKN-201ENST00000338468 IZUMO2Q6UXV1 221 aa12.41□□□□□ -0.42
PRKN-201ENST00000338468 OR51T1Q8NGJ9 327 aa12.41□□□□□ -0.42
PRKN-201ENST00000338468 COQ2Q96H96 371 aa12.41□□□□□ -0.42
PRKN-201ENST00000338468 DERL3Q96Q80 235 aa12.41□□□□□ -0.42
PRKN-201ENST00000338468 GPER1Q99527 375 aa12.41□□□□□ -0.42
PRKN-201ENST00000338468 DUSP21Q9H596 190 aa12.41□□□□□ -0.42
PRKN-201ENST00000338468 ZNF696Q9H7X3 374 aa12.41□□□□□ -0.42
PRKN-201ENST00000338468 HEXA-AS1Q9H8Q6 139 aa12.41□□□□□ -0.42
PRKN-201ENST00000338468 ZNF581Q9P0T4 197 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms