RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 CRYM-AS1A6NIL9 109 aa12.12□□□□□ -0.47
RTN4-202ENST00000337526 ZNF737O75373 536 aa12.12□□□□□ -0.47
RTN4-202ENST00000337526 DEFB123Q8N688 67 aa12.12□□□□□ -0.47
RTN4-202ENST00000337526 TMEM9BQ9NQ34 198 aa12.12□□□□□ -0.47
RTN4-202ENST00000337526 LHX9Q9NQ69 397 aa12.12□□□□□ -0.47
RTN4-202ENST00000337526 KIAA1456Q9P272 454 aa12.12□□□□□ -0.47
RTN4-202ENST00000337526 GGTLC2Q14390 218 aa12.12□□□□□ -0.47
RTN4-202ENST00000337526 Q3ZCU0 254 aa12.12□□□□□ -0.47
RTN4-202ENST00000337526 ETV3LQ6ZN32 361 aa12.12□□□□□ -0.47
RTN4-202ENST00000337526 ADAD2Q8NCV1 583 aaKnown RBP12.12□□□□□ -0.47
RTN4-202ENST00000337526 SEC11CQ9BY50 192 aa12.12□□□□□ -0.47
RTN4-202ENST00000337526 SLC25A22Q9H936 323 aa12.12□□□□□ -0.47
RTN4-202ENST00000337526 SLC2A9Q9NRM0 540 aa12.12□□□□□ -0.47
RTN4-202ENST00000337526 LIPGQ9Y5X9 500 aa12.12□□□□□ -0.47
RTN4-202ENST00000337526 MIA3Q5JRA6 1907 aa12.12□□□□□ -0.47
RTN4-202ENST00000337526 A0A1W2PQF6 199 aa12.12□□□□□ -0.47
RTN4-202ENST00000337526 CDRT15L2A8MXV6 281 aa12.12□□□□□ -0.47
RTN4-202ENST00000337526 HRASP01112 189 aa12.12□□□□□ -0.47
RTN4-202ENST00000337526 ERGP11308 486 aa12.12□□□□□ -0.47
RTN4-202ENST00000337526 P2RY1P47900 373 aa12.12□□□□□ -0.47
RTN4-202ENST00000337526 MEOX2P50222 304 aa12.12□□□□□ -0.47
RTN4-202ENST00000337526 FAM162BQ5T6X4 162 aa12.12□□□□□ -0.47
RTN4-202ENST00000337526 TBC1D26Q86UD7 250 aa12.12□□□□□ -0.47
RTN4-202ENST00000337526 TRAV17A0A0B4J275 112 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 C7orf77A4D0Y5 90 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 CHST1O43916 411 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 CD1AP06126 327 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 OR3A1P47881 315 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 SSPNQ14714 243 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 C17orf78Q8N4C9 275 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 C10orf35Q96D05 121 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 MPC1Q9Y5U8 109 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 PIKFYVEQ9Y2I7 2098 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 DBX1A6NMT0 343 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 SYNGR2O43760 224 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 PPYP01298 95 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 PNLIPP16233 465 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 FGF8P55075 233 aaPredicted RBP12.11□□□□□ -0.47
RTN4-202ENST00000337526 C9orf40Q8IXQ3 194 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 OR2I1PQ8NGU4 316 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 OR2Y1Q8NGV0 311 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 LRFN3Q9BTN0 628 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 MRPS18BQ9Y676 258 aaKnown RBP12.11□□□□□ -0.47
RTN4-202ENST00000337526 RRP8O43159 456 aaKnown RBP12.11□□□□□ -0.47
RTN4-202ENST00000337526 KIR3DL2P43630 455 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 GALR1P47211 349 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 TPPP2P59282 170 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 FAM3AP98173 230 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 IGFBP7Q16270 282 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 GAB4Q2WGN9 574 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 STUMQ69YW2 141 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 DHRS13Q6UX07 377 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 SLC16A13Q7RTY0 426 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 LYG1Q8N1E2 194 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 KLHDC1Q8N7A1 406 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 SF3B5Q9BWJ5 86 aaKnown RBP12.11□□□□□ -0.47
RTN4-202ENST00000337526 RAB33BQ9H082 229 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 CRISPLD2Q9H0B8 497 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 OR2D2Q9H210 308 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 GNB4Q9HAV0 340 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 HES4Q9HCC6 221 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 STARD10Q9Y365 291 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 LY86O95711 162 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 CHRNA7P36544 502 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 MDH2P40926 338 aaKnown RBP12.11□□□□□ -0.47
RTN4-202ENST00000337526 FAM219AQ8IW50 185 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 LHFPL5Q8TAF8 219 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 RSRP1Q9BUV0 290 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 ARL2-SNX15V9GYD0 113 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 COL4A5P29400 1685 aa12.11□□□□□ -0.47
RTN4-202ENST00000337526 AP4M1O00189 453 aa12.1□□□□□ -0.47
RTN4-202ENST00000337526 DYNLT3P51808 116 aa12.1□□□□□ -0.47
RTN4-202ENST00000337526 ZNF766Q5HY98 468 aa12.1□□□□□ -0.47
RTN4-202ENST00000337526 C9orf152Q5JTZ5 239 aa12.1□□□□□ -0.47
RTN4-202ENST00000337526 OR10G4Q8NGN3 311 aa12.1□□□□□ -0.47
RTN4-202ENST00000337526 OR10G9Q8NGN4 311 aa12.1□□□□□ -0.47
RTN4-202ENST00000337526 OR10G7Q8NGN6 311 aa12.1□□□□□ -0.47
RTN4-202ENST00000337526 TNFSF18Q9UNG2 199 aa12.1□□□□□ -0.47
RTN4-202ENST00000337526 TNS1Q9HBL0 1735 aaKnown RBP12.1□□□□□ -0.47
RTN4-202ENST00000337526 A0A1W2PPC1 479 aa12.1□□□□□ -0.47
RTN4-202ENST00000337526 VSIG10L2P0DP72 767 aa12.1□□□□□ -0.47
RTN4-202ENST00000337526 CXCL2P19875 107 aa12.1□□□□□ -0.47
RTN4-202ENST00000337526 LYZL2Q7Z4W2 148 aa12.1□□□□□ -0.47
RTN4-202ENST00000337526 FBP1P09467 338 aa12.1□□□□□ -0.47
RTN4-202ENST00000337526 ASAH2BP0C7U1 165 aa12.1□□□□□ -0.47
RTN4-202ENST00000337526 TNFRSF1AP19438 455 aa12.1□□□□□ -0.47
RTN4-202ENST00000337526 SPINK2P20155 84 aa12.1□□□□□ -0.47
RTN4-202ENST00000337526 CDC34P49427 236 aaPredicted RBP12.1□□□□□ -0.47
RTN4-202ENST00000337526 MEOX1P50221 254 aa12.1□□□□□ -0.47
RTN4-202ENST00000337526 IQCJQ1A5X6 159 aa12.1□□□□□ -0.47
RTN4-202ENST00000337526 DCAF12L2Q5VW00 463 aa12.1□□□□□ -0.47
RTN4-202ENST00000337526 PTX4Q96A99 478 aa12.1□□□□□ -0.47
RTN4-202ENST00000337526 TM4SF19Q96DZ7 209 aa12.1□□□□□ -0.47
RTN4-202ENST00000337526 PGLYRP3Q96LB9 341 aa12.1□□□□□ -0.47
RTN4-202ENST00000337526 UCN2Q96RP3 112 aa12.1□□□□□ -0.47
RTN4-202ENST00000337526 SF3B6Q9Y3B4 125 aaKnown RBP12.1□□□□□ -0.47
RTN4-202ENST00000337526 TRIOBPQ9H2D6 2365 aa12.1□□□□□ -0.47
RTN4-202ENST00000337526 SERTM2A0A1B0GWG4 89 aa12.1□□□□□ -0.47
RTN4-202ENST00000337526 C5orf67F2Z3F1 127 aa12.1□□□□□ -0.47
RTN4-202ENST00000337526 MKRN2OSH3BPM6 223 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms