RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 TAF9Q16594 264 aa12.15□□□□□ -0.46
KATNA1-201ENST00000335643 SPIN3Q5JUX0 258 aa12.15□□□□□ -0.46
KATNA1-201ENST00000335643 NCR3LG1Q68D85 454 aa12.15□□□□□ -0.46
KATNA1-201ENST00000335643 Q6P435 159 aa12.15□□□□□ -0.46
KATNA1-201ENST00000335643 GDPD3Q7L5L3 318 aa12.15□□□□□ -0.46
KATNA1-201ENST00000335643 SAXO1Q8IYX7 474 aa12.15□□□□□ -0.46
KATNA1-201ENST00000335643 STX19Q8N4C7 294 aa12.15□□□□□ -0.46
KATNA1-201ENST00000335643 OR5D13Q8NGL4 314 aa12.15□□□□□ -0.46
KATNA1-201ENST00000335643 SSMEM1Q8WWF3 244 aa12.15□□□□□ -0.46
KATNA1-201ENST00000335643 HAX1O00165 279 aa12.14□□□□□ -0.47
KATNA1-201ENST00000335643 IGFBP3P17936 291 aaPredicted RBP12.14□□□□□ -0.47
KATNA1-201ENST00000335643 MDKP21741 143 aaPredicted RBP12.14□□□□□ -0.47
KATNA1-201ENST00000335643 COX7A1P24310 79 aa12.14□□□□□ -0.47
KATNA1-201ENST00000335643 EEF1B2P24534 225 aaKnown RBP12.14□□□□□ -0.47
KATNA1-201ENST00000335643 OR3A4PP47883 348 aa12.14□□□□□ -0.47
KATNA1-201ENST00000335643 C6orf141Q5SZD1 244 aa12.14□□□□□ -0.47
KATNA1-201ENST00000335643 LDLRAD2Q5SZI1 272 aa12.14□□□□□ -0.47
KATNA1-201ENST00000335643 SATL1Q86VE3 508 aa12.14□□□□□ -0.47
KATNA1-201ENST00000335643 TMEM86BQ8N661 226 aa12.14□□□□□ -0.47
KATNA1-201ENST00000335643 NANOGP1Q8N7R0 232 aa12.14□□□□□ -0.47
KATNA1-201ENST00000335643 OR10K1Q8NGX5 313 aa12.14□□□□□ -0.47
KATNA1-201ENST00000335643 OR14A2Q96R54 314 aa12.14□□□□□ -0.47
KATNA1-201ENST00000335643 EXOSC4Q9NPD3 245 aaKnown RBP12.14□□□□□ -0.47
KATNA1-201ENST00000335643 CHCHD3Q9NX63 227 aaKnown RBP12.14□□□□□ -0.47
KATNA1-201ENST00000335643 ZNF581Q9P0T4 197 aa12.14□□□□□ -0.47
KATNA1-201ENST00000335643 FAM96BQ9Y3D0 163 aa12.14□□□□□ -0.47
KATNA1-201ENST00000335643 POMT1Q9Y6A1 747 aa12.14□□□□□ -0.47
KATNA1-201ENST00000335643 TRAV8-7A0A075B6U6 113 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 A0A0G2JK05 382 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 A0A1W2PPK0 400 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 FBP1P09467 338 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 ACSM1Q08AH1 577 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 FOXL1Q12952 345 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 C3orf56Q8N813 242 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 ZSCAN4Q8NAM6 433 aaPredicted RBP12.13□□□□□ -0.47
KATNA1-201ENST00000335643 TNFAIP8L1Q8WVP5 186 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 PPA2Q9H2U2 334 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 C1RLQ9NZP8 487 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 PCDHGB5Q9Y5G0 923 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 CMYA5Q8N3K9 4069 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 PTGES3LE9PB15 166 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 H0YJX3 145 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 SLC33A1O00400 549 aaPredicted RBP12.13□□□□□ -0.47
KATNA1-201ENST00000335643 MYL12BO14950 172 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 GPR137BO60478 399 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 MMP23AO75900 390 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 CDRT1O95170 752 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 CDK1P06493 297 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 CD2P06729 351 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 ZNF728P0DKX0 622 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 LMO1P25800 156 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 WNT4P56705 351 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 SCN1BQ07699 218 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 MED21Q13503 144 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 INSL4Q14641 139 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 Q499Y3 187 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 BAIAP2L2Q6UXY1 529 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 LHFPL4Q7Z7J7 247 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 DYNAPQ8N1N2 210 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 PXT1Q8NFP0 134 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 TBC1D15Q8TC07 691 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 GPER1Q99527 375 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 FAM192AQ9GZU8 254 aa12.13□□□□□ -0.47
KATNA1-201ENST00000335643 SF3B6Q9Y3B4 125 aaKnown RBP12.13□□□□□ -0.47
KATNA1-201ENST00000335643 VWFP04275 2813 aa12.12□□□□□ -0.47
KATNA1-201ENST00000335643 TRBV5-7A0A0A0MS05 114 aa12.12□□□□□ -0.47
KATNA1-201ENST00000335643 A0A1W2PPH5 198 aa12.12□□□□□ -0.47
KATNA1-201ENST00000335643 SH2D1BO14796 132 aa12.12□□□□□ -0.47
KATNA1-201ENST00000335643 MGST3O14880 152 aa12.12□□□□□ -0.47
KATNA1-201ENST00000335643 PIN1P1O15428 100 aa12.12□□□□□ -0.47
KATNA1-201ENST00000335643 IGHV1-8P0DP01 117 aa12.12□□□□□ -0.47
KATNA1-201ENST00000335643 ZNF44P15621 663 aa12.12□□□□□ -0.47
KATNA1-201ENST00000335643 CELP19835 753 aa12.12□□□□□ -0.47
KATNA1-201ENST00000335643 GLIPR1P48060 266 aa12.12□□□□□ -0.47
KATNA1-201ENST00000335643 P2RX3P56373 397 aa12.12□□□□□ -0.47
KATNA1-201ENST00000335643 MEF2CQ06413 473 aaPredicted RBP12.12□□□□□ -0.47
KATNA1-201ENST00000335643 AESQ08117 197 aa12.12□□□□□ -0.47
KATNA1-201ENST00000335643 PIGYQ3MUY2 71 aa12.12□□□□□ -0.47
KATNA1-201ENST00000335643 MIDNQ504T8 468 aa12.12□□□□□ -0.47
KATNA1-201ENST00000335643 YIF1BQ5BJH7 314 aa12.12□□□□□ -0.47
KATNA1-201ENST00000335643 DDI2Q5TDH0 399 aa12.12□□□□□ -0.47
KATNA1-201ENST00000335643 ELP2Q6IA86 826 aa12.12□□□□□ -0.47
KATNA1-201ENST00000335643 ASCL4Q6XD76 172 aa12.12□□□□□ -0.47
KATNA1-201ENST00000335643 COQ2Q96H96 371 aa12.12□□□□□ -0.47
KATNA1-201ENST00000335643 ZNF714Q96N38 554 aa12.12□□□□□ -0.47
KATNA1-201ENST00000335643 OR5M11Q96RB7 305 aa12.12□□□□□ -0.47
KATNA1-201ENST00000335643 NR1H4Q96RI1 486 aaPredicted RBP12.12□□□□□ -0.47
KATNA1-201ENST00000335643 RHOFQ9HBH0 211 aa12.12□□□□□ -0.47
KATNA1-201ENST00000335643 TMEM138Q9NPI0 162 aa12.12□□□□□ -0.47
KATNA1-201ENST00000335643 ING3Q9NXR8 418 aa12.12□□□□□ -0.47
KATNA1-201ENST00000335643 LSM2Q9Y333 95 aaKnown RBP12.12□□□□□ -0.47
KATNA1-201ENST00000335643 LINC00312Q9Y6C7 94 aa12.12□□□□□ -0.47
KATNA1-201ENST00000335643 KIAA2026Q5HYC2 2103 aa12.11□□□□□ -0.47
KATNA1-201ENST00000335643 A0A1W2PP11 408 aa12.11□□□□□ -0.47
KATNA1-201ENST00000335643 MEGF11A6BM72 1044 aa12.11□□□□□ -0.47
KATNA1-201ENST00000335643 ODF3BA8MYP8 253 aa12.11□□□□□ -0.47
KATNA1-201ENST00000335643 ALDOBP05062 364 aa12.11□□□□□ -0.47
KATNA1-201ENST00000335643 MYF6P23409 242 aa12.11□□□□□ -0.47
KATNA1-201ENST00000335643 ERP29P30040 261 aaKnown RBP12.11□□□□□ -0.47
KATNA1-201ENST00000335643 BDKRB2P30411 391 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms