RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 TTRP02766 147 aa13.13□□□□□ -0.31
C9orf47-201ENST00000334490 COX6B1P14854 86 aa13.13□□□□□ -0.31
C9orf47-201ENST00000334490 TGM1P22735 817 aa13.13□□□□□ -0.31
C9orf47-201ENST00000334490 SIGLEC12Q96PQ1 595 aa13.13□□□□□ -0.31
C9orf47-201ENST00000334490 KCNK17Q96T54 332 aa13.13□□□□□ -0.31
C9orf47-201ENST00000334490 NIPSNAP3BQ9BS92 247 aa13.13□□□□□ -0.31
C9orf47-201ENST00000334490 NMES1Q9C002 83 aa13.13□□□□□ -0.31
C9orf47-201ENST00000334490 DSPPQ9NZW4 1301 aa13.12□□□□□ -0.31
C9orf47-201ENST00000334490 MS4A18H0YCH9 400 aa13.12□□□□□ -0.31
C9orf47-201ENST00000334490 GZMHP20718 246 aa13.12□□□□□ -0.31
C9orf47-201ENST00000334490 MS4A18Q3C1V0 323 aa13.12□□□□□ -0.31
C9orf47-201ENST00000334490 LHX4Q969G2 390 aa13.12□□□□□ -0.31
C9orf47-201ENST00000334490 ROS1P08922 2347 aa13.12□□□□□ -0.31
C9orf47-201ENST00000334490 RALGAPA2Q2PPJ7 1873 aa13.12□□□□□ -0.31
C9orf47-201ENST00000334490 RECKO95980 971 aa13.12□□□□□ -0.31
C9orf47-201ENST00000334490 LINC00271P0C7V0 271 aa13.12□□□□□ -0.31
C9orf47-201ENST00000334490 RPS4Y1P22090 263 aaKnown RBP13.12□□□□□ -0.31
C9orf47-201ENST00000334490 ADAMTS17Q8TE56 1095 aa13.12□□□□□ -0.31
C9orf47-201ENST00000334490 SCARB1Q8WTV0 552 aa13.12□□□□□ -0.31
C9orf47-201ENST00000334490 RCL1Q9Y2P8 373 aaKnown RBP13.12□□□□□ -0.31
C9orf47-201ENST00000334490 IGKV3D-11A0A0A0MRZ8 115 aa13.11□□□□□ -0.31
C9orf47-201ENST00000334490 RFPL3SP0C7P2 107 aa13.11□□□□□ -0.31
C9orf47-201ENST00000334490 M6PRP20645 277 aa13.11□□□□□ -0.31
C9orf47-201ENST00000334490 GPR6P46095 362 aaPredicted RBP13.11□□□□□ -0.31
C9orf47-201ENST00000334490 UBE2G1P62253 170 aa13.11□□□□□ -0.31
C9orf47-201ENST00000334490 HABP2Q14520 560 aaPredicted RBP13.11□□□□□ -0.31
C9orf47-201ENST00000334490 HIST2H3PS2Q5TEC6 136 aa13.11□□□□□ -0.31
C9orf47-201ENST00000334490 HGDQ93099 445 aa13.11□□□□□ -0.31
C9orf47-201ENST00000334490 GPX7Q96SL4 187 aaPredicted RBP13.11□□□□□ -0.31
C9orf47-201ENST00000334490 TIMP4Q99727 224 aa13.11□□□□□ -0.31
C9orf47-201ENST00000334490 HES4Q9HCC6 221 aa13.11□□□□□ -0.31
C9orf47-201ENST00000334490 BDP1A6H8Y1 2624 aa13.11□□□□□ -0.31
C9orf47-201ENST00000334490 RFPL4AA6NLU0 287 aa13.11□□□□□ -0.31
C9orf47-201ENST00000334490 RFPL4AL1F8VTS6 287 aa13.11□□□□□ -0.31
C9orf47-201ENST00000334490 BPIFB3P59826 476 aa13.11□□□□□ -0.31
C9orf47-201ENST00000334490 ABHD17AQ96GS6 310 aa13.11□□□□□ -0.31
C9orf47-201ENST00000334490 TNFRSF19Q9NS68 423 aa13.11□□□□□ -0.31
C9orf47-201ENST00000334490 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.11□□□□□ -0.31
C9orf47-201ENST00000334490 C19orf12Q9NSK7 152 aa13.11□□□□□ -0.31
C9orf47-201ENST00000334490 ANXA10Q9UJ72 324 aa13.11□□□□□ -0.31
C9orf47-201ENST00000334490 IGHV3OR15-7A0A075B7D8 119 aa13.11□□□□□ -0.31
C9orf47-201ENST00000334490 TMEM210A6NLX4 147 aa13.11□□□□□ -0.31
C9orf47-201ENST00000334490 ZNF724A8MTY0 619 aa13.11□□□□□ -0.31
C9orf47-201ENST00000334490 COX5AP20674 150 aa13.11□□□□□ -0.31
C9orf47-201ENST00000334490 ACOT6Q3I5F7 207 aaPredicted RBP13.11□□□□□ -0.31
C9orf47-201ENST00000334490 AKR1E2Q96JD6 320 aa13.11□□□□□ -0.31
C9orf47-201ENST00000334490 BIN3Q9NQY0 253 aa13.11□□□□□ -0.31
C9orf47-201ENST00000334490 MED9Q9NWA0 146 aa13.11□□□□□ -0.31
C9orf47-201ENST00000334490 TMED3Q9Y3Q3 217 aa13.11□□□□□ -0.31
C9orf47-201ENST00000334490 TRAV39A0A0B4J263 110 aa13.11□□□□□ -0.31
C9orf47-201ENST00000334490 MPV17LQ2QL34 196 aa13.11□□□□□ -0.31
C9orf47-201ENST00000334490 SLC25A47Q6Q0C1 308 aa13.11□□□□□ -0.31
C9orf47-201ENST00000334490 C1orf174Q8IYL3 243 aa13.11□□□□□ -0.31
C9orf47-201ENST00000334490 C15orf54Q8N8G6 183 aa13.11□□□□□ -0.31
C9orf47-201ENST00000334490 LFNGQ8NES3 379 aa13.11□□□□□ -0.31
C9orf47-201ENST00000334490 SRXN1Q9BYN0 137 aa13.11□□□□□ -0.31
C9orf47-201ENST00000334490 HEXA-AS1Q9H8Q6 139 aa13.11□□□□□ -0.31
C9orf47-201ENST00000334490 CISD1Q9NZ45 108 aaKnown RBP13.11□□□□□ -0.31
C9orf47-201ENST00000334490 PPIAL4EA0A075B759 164 aa13.1□□□□□ -0.31
C9orf47-201ENST00000334490 PPIAL4DF5H284 164 aa13.1□□□□□ -0.31
C9orf47-201ENST00000334490 PPIAL4FP0DN26 164 aa13.1□□□□□ -0.31
C9orf47-201ENST00000334490 BRS3P32247 399 aa13.1□□□□□ -0.31
C9orf47-201ENST00000334490 ASCL1P50553 236 aa13.1□□□□□ -0.31
C9orf47-201ENST00000334490 NANOS3P60323 173 aaKnown RBP13.1□□□□□ -0.31
C9orf47-201ENST00000334490 SSTP61278 116 aa13.1□□□□□ -0.31
C9orf47-201ENST00000334490 SNTB1Q13884 538 aaKnown RBP13.1□□□□□ -0.31
C9orf47-201ENST00000334490 ADIRFQ15847 76 aa13.1□□□□□ -0.31
C9orf47-201ENST00000334490 PIGYQ3MUY2 71 aa13.1□□□□□ -0.31
C9orf47-201ENST00000334490 RIPPLY2Q5TAB7 128 aa13.1□□□□□ -0.31
C9orf47-201ENST00000334490 GLDNQ6ZMI3 551 aaPredicted RBP13.1□□□□□ -0.31
C9orf47-201ENST00000334490 ACTR3CQ9C0K3 210 aaPredicted RBP13.1□□□□□ -0.31
C9orf47-201ENST00000334490 PIGMQ9H3S5 423 aa13.1□□□□□ -0.31
C9orf47-201ENST00000334490 PPIAL4AQ9Y536 164 aa13.1□□□□□ -0.31
C9orf47-201ENST00000334490 DOCK8Q8NF50 2099 aa13.1□□□□□ -0.31
C9orf47-201ENST00000334490 PPP1R1AQ13522 171 aa13.1□□□□□ -0.31
C9orf47-201ENST00000334490 MRGPRGQ86SM5 289 aa13.1□□□□□ -0.31
C9orf47-201ENST00000334490 GSX2Q9BZM3 304 aa13.1□□□□□ -0.31
C9orf47-201ENST00000334490 C3orf85A0A1B0GTC6 90 aa13.1□□□□□ -0.31
C9orf47-201ENST00000334490 RPS10-NUDT3A0A1W2PQS6 291 aa13.1□□□□□ -0.31
C9orf47-201ENST00000334490 OOEPA6NGQ2 149 aa13.1□□□□□ -0.31
C9orf47-201ENST00000334490 TGFBR3LH3BV60 316 aa13.1□□□□□ -0.31
C9orf47-201ENST00000334490 RPS10P46783 165 aaKnown RBP13.1□□□□□ -0.31
C9orf47-201ENST00000334490 DHRS2Q13268 280 aa13.1□□□□□ -0.31
C9orf47-201ENST00000334490 MRPL14Q6P1L8 145 aaKnown RBP13.1□□□□□ -0.31
C9orf47-201ENST00000334490 MRPS18AQ9NVS2 196 aaKnown RBP13.1□□□□□ -0.31
C9orf47-201ENST00000334490 MTCH1Q9NZJ7 389 aa13.1□□□□□ -0.31
C9orf47-201ENST00000334490 CYB5R1Q9UHQ9 305 aa13.1□□□□□ -0.31
C9orf47-201ENST00000334490 LIPGQ9Y5X9 500 aa13.1□□□□□ -0.31
C9orf47-201ENST00000334490 PATJQ8NI35 1801 aa13.1□□□□□ -0.31
C9orf47-201ENST00000334490 TRDCB7Z8K6 153 aa13.1□□□□□ -0.31
C9orf47-201ENST00000334490 GGTLC2Q14390 218 aa13.1□□□□□ -0.31
C9orf47-201ENST00000334490 TOR2AQ5JU69 321 aa13.1□□□□□ -0.31
C9orf47-201ENST00000334490 MARC2Q969Z3 335 aa13.1□□□□□ -0.31
C9orf47-201ENST00000334490 CHCHD2Q9Y6H1 151 aaPredicted RBP13.1□□□□□ -0.31
C9orf47-201ENST00000334490 C9orf172C9J069 976 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 VSIG8P0DPA2 414 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 FAM122CQ6P4D5 195 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 SPICQ8N5J4 248 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 ZNF488Q96MN9 340 aa13.09□□□□□ -0.31
C9orf47-201ENST00000334490 SLC35D1Q9NTN3 355 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms