RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 MSL2Q9HCI7 577 aa8.29□□□□□ -1.08
SS18L1-201ENST00000331758 KCNJ16Q9NPI9 418 aa8.29□□□□□ -1.08
SS18L1-201ENST00000331758 RPS10P5Q9NQ39 176 aa8.29□□□□□ -1.08
SS18L1-201ENST00000331758 PRELID3BQ9Y3B1 194 aa8.29□□□□□ -1.08
SS18L1-201ENST00000331758 FER1L5A0AVI2 2057 aa8.29□□□□□ -1.08
SS18L1-201ENST00000331758 BCL3P20749 454 aa8.29□□□□□ -1.08
SS18L1-201ENST00000331758 OR8G2PQ6IF36 304 aa8.29□□□□□ -1.08
SS18L1-201ENST00000331758 C11orf87Q6NUJ2 197 aa8.29□□□□□ -1.08
SS18L1-201ENST00000331758 LHFPL5Q8TAF8 219 aa8.29□□□□□ -1.08
SS18L1-201ENST00000331758 TIMP4Q99727 224 aa8.29□□□□□ -1.08
SS18L1-201ENST00000331758 GHITMQ9H3K2 345 aa8.29□□□□□ -1.08
SS18L1-201ENST00000331758 TAF9BQ9HBM6 251 aa8.29□□□□□ -1.08
SS18L1-201ENST00000331758 RFPL4AA6NLU0 287 aa8.29□□□□□ -1.08
SS18L1-201ENST00000331758 RFPL4AL1F8VTS6 287 aa8.29□□□□□ -1.08
SS18L1-201ENST00000331758 H3BP45 60 aa8.29□□□□□ -1.08
SS18L1-201ENST00000331758 DUS4LO95620 317 aaKnown RBP8.29□□□□□ -1.08
SS18L1-201ENST00000331758 EIF2S3P41091 472 aaKnown RBP8.29□□□□□ -1.08
SS18L1-201ENST00000331758 PPT1P50897 306 aa8.29□□□□□ -1.08
SS18L1-201ENST00000331758 ENDOGQ14249 297 aaKnown RBP8.29□□□□□ -1.08
SS18L1-201ENST00000331758 UBE2V2Q15819 145 aa8.29□□□□□ -1.08
SS18L1-201ENST00000331758 SLC25A53Q5H9E4 307 aa8.29□□□□□ -1.08
SS18L1-201ENST00000331758 TMEM255AQ5JRV8 349 aa8.29□□□□□ -1.08
SS18L1-201ENST00000331758 BMPERQ8N8U9 685 aa8.29□□□□□ -1.08
SS18L1-201ENST00000331758 OR5T1Q8NG75 326 aa8.29□□□□□ -1.08
SS18L1-201ENST00000331758 MRPL13Q9BYD1 178 aaKnown RBP8.29□□□□□ -1.08
SS18L1-201ENST00000331758 C19orf67A6NJJ6 358 aa8.28□□□□□ -1.08
SS18L1-201ENST00000331758 C3orf80F5H4A9 247 aa8.28□□□□□ -1.08
SS18L1-201ENST00000331758 IFNA10P01566 189 aa8.28□□□□□ -1.08
SS18L1-201ENST00000331758 S100PP25815 95 aa8.28□□□□□ -1.08
SS18L1-201ENST00000331758 TMEM88Q6PEY1 159 aa8.28□□□□□ -1.08
SS18L1-201ENST00000331758 UQCC3Q6UW78 93 aa8.28□□□□□ -1.08
SS18L1-201ENST00000331758 FAM219AQ8IW50 185 aa8.28□□□□□ -1.08
SS18L1-201ENST00000331758 Q8IYB0 196 aa8.28□□□□□ -1.08
SS18L1-201ENST00000331758 MARC2Q969Z3 335 aa8.28□□□□□ -1.08
SS18L1-201ENST00000331758 RAB39BQ96DA2 213 aa8.28□□□□□ -1.08
SS18L1-201ENST00000331758 WNT5BQ9H1J7 359 aa8.28□□□□□ -1.08
SS18L1-201ENST00000331758 NKX6-3A6NJ46 265 aa8.28□□□□□ -1.08
SS18L1-201ENST00000331758 GPR31O00270 319 aa8.28□□□□□ -1.08
SS18L1-201ENST00000331758 SSSCA1O60232 199 aa8.28□□□□□ -1.08
SS18L1-201ENST00000331758 SFT2D2O95562 160 aa8.28□□□□□ -1.08
SS18L1-201ENST00000331758 IFNA1P01562 189 aa8.28□□□□□ -1.08
SS18L1-201ENST00000331758 HMGN3Q15651 99 aa8.28□□□□□ -1.08
SS18L1-201ENST00000331758 C10orf128Q5T292 105 aa8.28□□□□□ -1.08
SS18L1-201ENST00000331758 ZFP82Q8N141 532 aa8.28□□□□□ -1.08
SS18L1-201ENST00000331758 PTX4Q96A99 478 aa8.28□□□□□ -1.08
SS18L1-201ENST00000331758 GALMQ96C23 342 aa8.28□□□□□ -1.08
SS18L1-201ENST00000331758 HEYLQ9NQ87 328 aaPredicted RBP8.28□□□□□ -1.08
SS18L1-201ENST00000331758 HPNP05981 417 aa8.28□□□□□ -1.08
SS18L1-201ENST00000331758 ZNF260Q3ZCT1 412 aa8.28□□□□□ -1.08
SS18L1-201ENST00000331758 PHYHD1Q5SRE7 291 aa8.28□□□□□ -1.08
SS18L1-201ENST00000331758 NDRG3Q9UGV2 375 aa8.28□□□□□ -1.08
SS18L1-201ENST00000331758 CACNA1BQ00975 2339 aa8.28□□□□□ -1.08
SS18L1-201ENST00000331758 ENSAO43768 121 aaKnown RBP8.27□□□□□ -1.08
SS18L1-201ENST00000331758 NME2P1O60361 137 aa8.27□□□□□ -1.08
SS18L1-201ENST00000331758 B3GALNT1O75752 331 aa8.27□□□□□ -1.08
SS18L1-201ENST00000331758 RAB32Q13637 225 aa8.27□□□□□ -1.08
SS18L1-201ENST00000331758 ZNF385CQ66K41 422 aaPredicted RBP8.27□□□□□ -1.08
SS18L1-201ENST00000331758 BHLHA15Q7RTS1 189 aaPredicted RBP8.27□□□□□ -1.08
SS18L1-201ENST00000331758 BAP18Q8IXM2 172 aa8.27□□□□□ -1.08
SS18L1-201ENST00000331758 KCNRGQ8N5I3 272 aa8.27□□□□□ -1.08
SS18L1-201ENST00000331758 OR10V1Q8NGI7 309 aa8.27□□□□□ -1.08
SS18L1-201ENST00000331758 LRRC29Q8WV35 223 aa8.27□□□□□ -1.08
SS18L1-201ENST00000331758 FBXW5Q969U6 566 aa8.27□□□□□ -1.08
SS18L1-201ENST00000331758 CA10Q9NS85 328 aa8.27□□□□□ -1.08
SS18L1-201ENST00000331758 COL4A4P53420 1690 aaPredicted RBP8.27□□□□□ -1.08
SS18L1-201ENST00000331758 IGHV3-13P01766 116 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 IGHV3-7P01780 117 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 OR5AC1P0C628 307 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 SNCAP37840 140 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 GPR12P47775 334 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 SPANXN5Q5MJ07 72 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 CLEC18BQ6UXF7 455 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 ADAD2Q8NCV1 583 aaKnown RBP8.27□□□□□ -1.09
SS18L1-201ENST00000331758 OR5A2Q8NGI9 324 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 OR4A16Q8NH70 328 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 C2CD4CQ8TF44 421 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 TAAR3PQ9P1P4 343 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 OPN4Q9UHM6 478 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 LY6G6EA0A0G2JKS1 128 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 TMEM30CPA0ZSE6 113 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 FAM90A27PA6NNH2 459 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 DEFB108AA8MXU0 73 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 VSIG10L2P0DP72 767 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 HBG1P69891 147 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 HBG2P69892 147 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 ZNF266Q14584 549 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 H2BFWTQ7Z2G1 175 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 TMEM54Q969K7 222 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 SUCNR1Q9BXA5 334 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 TREM2Q9NZC2 230 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 FBXO7Q9Y3I1 522 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 U3KQA8 63 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 MED13LQ71F56 2210 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 IGLV3-32A0A0A0MS00 114 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 PINLYPA6NC86 204 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 WISP1O95388 367 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 MPC2O95563 127 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 IAPPP10997 89 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 CBR1P16152 277 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 KLF3P57682 345 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms