RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 TMEM171Q8WVE6 324 aa12.55□□□□□ -0.4
SNX20-202ENST00000330943 METTL9Q9H1A3 318 aa12.55□□□□□ -0.4
SNX20-202ENST00000330943 PRO1933Q9H354 126 aa12.55□□□□□ -0.4
SNX20-202ENST00000330943 UCK1Q9HA47 277 aa12.55□□□□□ -0.4
SNX20-202ENST00000330943 EXPH5Q8NEV8 1989 aa12.55□□□□□ -0.4
SNX20-202ENST00000330943 A0A1W2PPC4 97 aa12.55□□□□□ -0.4
SNX20-202ENST00000330943 NKX2-6A6NCS4 301 aa12.55□□□□□ -0.4
SNX20-202ENST00000330943 CLDN17P56750 224 aa12.55□□□□□ -0.4
SNX20-202ENST00000330943 UNQ6494/PRO21346Q6UXR6 183 aa12.55□□□□□ -0.4
SNX20-202ENST00000330943 GTF3AQ92664 365 aaKnown RBP12.55□□□□□ -0.4
SNX20-202ENST00000330943 OXGR1Q96P68 337 aa12.55□□□□□ -0.4
SNX20-202ENST00000330943 MAGT1Q9H0U3 335 aa12.55□□□□□ -0.4
SNX20-202ENST00000330943 A0A1B0GX78 115 aa12.55□□□□□ -0.4
SNX20-202ENST00000330943 SLC33A1O00400 549 aaPredicted RBP12.55□□□□□ -0.4
SNX20-202ENST00000330943 SSSCA1O60232 199 aa12.55□□□□□ -0.4
SNX20-202ENST00000330943 PITX3O75364 302 aa12.55□□□□□ -0.4
SNX20-202ENST00000330943 DTYMKP23919 212 aa12.55□□□□□ -0.4
SNX20-202ENST00000330943 RUNX1Q01196 453 aa12.55□□□□□ -0.4
SNX20-202ENST00000330943 CCDC54Q8NEL0 328 aa12.55□□□□□ -0.4
SNX20-202ENST00000330943 CHRNA10Q9GZZ6 450 aa12.55□□□□□ -0.4
SNX20-202ENST00000330943 MMP17Q9ULZ9 603 aa12.55□□□□□ -0.4
SNX20-202ENST00000330943 CCDC163A0A0D9SF12 145 aa12.54□□□□□ -0.4
SNX20-202ENST00000330943 BTBD17A6NE02 478 aa12.54□□□□□ -0.4
SNX20-202ENST00000330943 OR5H1A6NKK0 313 aa12.54□□□□□ -0.4
SNX20-202ENST00000330943 C10orf142B7Z368 130 aa12.54□□□□□ -0.4
SNX20-202ENST00000330943 MSR1P21757 451 aa12.54□□□□□ -0.4
SNX20-202ENST00000330943 GLIPR1P48060 266 aa12.54□□□□□ -0.4
SNX20-202ENST00000330943 OR1D5P58170 312 aa12.54□□□□□ -0.4
SNX20-202ENST00000330943 HIST3H3Q16695 136 aa12.54□□□□□ -0.4
SNX20-202ENST00000330943 OR5C1Q8NGR4 320 aa12.54□□□□□ -0.4
SNX20-202ENST00000330943 SIRT7Q9NRC8 400 aa12.54□□□□□ -0.4
SNX20-202ENST00000330943 CA14Q9ULX7 337 aa12.54□□□□□ -0.4
SNX20-202ENST00000330943 CCDC85CA6NKD9 419 aa12.54□□□□□ -0.4
SNX20-202ENST00000330943 HSPA12AO43301 675 aa12.54□□□□□ -0.4
SNX20-202ENST00000330943 CST7O76096 145 aa12.54□□□□□ -0.4
SNX20-202ENST00000330943 TRGC1P0CF51 173 aa12.54□□□□□ -0.4
SNX20-202ENST00000330943 CTSSP25774 331 aa12.54□□□□□ -0.4
SNX20-202ENST00000330943 NKX2-1P43699 371 aaPredicted RBP12.54□□□□□ -0.4
SNX20-202ENST00000330943 HERV-K104P61576 105 aa12.54□□□□□ -0.4
SNX20-202ENST00000330943 C4orf17Q53FE4 359 aa12.54□□□□□ -0.4
SNX20-202ENST00000330943 TMEM217Q8N7C4 229 aa12.54□□□□□ -0.4
SNX20-202ENST00000330943 ADPRHL1Q8NDY3 354 aa12.54□□□□□ -0.4
SNX20-202ENST00000330943 GJC3Q8NFK1 279 aa12.54□□□□□ -0.4
SNX20-202ENST00000330943 METTL7AQ9H8H3 244 aa12.54□□□□□ -0.4
SNX20-202ENST00000330943 ELOA3CA0A087WX78 387 aaPredicted RBP12.53□□□□□ -0.4
SNX20-202ENST00000330943 TRBV11-1A0A0K0K1C0 115 aa12.53□□□□□ -0.4
SNX20-202ENST00000330943 RPL36A-HNRNPH2H7BZ11 118 aa12.53□□□□□ -0.4
SNX20-202ENST00000330943 M0R135 149 aa12.53□□□□□ -0.4
SNX20-202ENST00000330943 GEMIN2O14893 280 aaKnown RBP12.53□□□□□ -0.4
SNX20-202ENST00000330943 BCAT2O15382 392 aaPredicted RBP12.53□□□□□ -0.4
SNX20-202ENST00000330943 HSPB1P04792 205 aaKnown RBP12.53□□□□□ -0.4
SNX20-202ENST00000330943 DDTP30046 118 aa12.53□□□□□ -0.4
SNX20-202ENST00000330943 RPL23AP62750 156 aaKnown RBP12.53□□□□□ -0.4
SNX20-202ENST00000330943 SNAI3Q3KNW1 292 aa12.53□□□□□ -0.4
SNX20-202ENST00000330943 PIGYQ3MUY2 71 aa12.53□□□□□ -0.4
SNX20-202ENST00000330943 CCDC71LQ8N9Z2 235 aa12.53□□□□□ -0.4
SNX20-202ENST00000330943 OR8G5Q8NG78 346 aa12.53□□□□□ -0.4
SNX20-202ENST00000330943 OR2AE1Q8NHA4 323 aa12.53□□□□□ -0.4
SNX20-202ENST00000330943 FRZBQ92765 325 aa12.53□□□□□ -0.4
SNX20-202ENST00000330943 ZNF799Q96GE5 643 aa12.53□□□□□ -0.4
SNX20-202ENST00000330943 ANGPTL4Q9BY76 406 aa12.53□□□□□ -0.4
SNX20-202ENST00000330943 FOXD3Q9UJU5 478 aaPredicted RBP12.53□□□□□ -0.4
SNX20-202ENST00000330943 SDK2Q58EX2 2172 aa12.53□□□□□ -0.4
SNX20-202ENST00000330943 TLX3O43711 291 aaPredicted RBP12.53□□□□□ -0.4
SNX20-202ENST00000330943 AADACP22760 399 aa12.53□□□□□ -0.4
SNX20-202ENST00000330943 PDCD1Q15116 288 aa12.53□□□□□ -0.4
SNX20-202ENST00000330943 RSPO1Q2MKA7 263 aaPredicted RBP12.53□□□□□ -0.4
SNX20-202ENST00000330943 FAM69BQ5VUD6 431 aa12.53□□□□□ -0.4
SNX20-202ENST00000330943 MOB3AQ96BX8 217 aa12.53□□□□□ -0.4
SNX20-202ENST00000330943 TGIF2Q9GZN2 237 aa12.53□□□□□ -0.4
SNX20-202ENST00000330943 ZNF576Q9H609 170 aa12.53□□□□□ -0.4
SNX20-202ENST00000330943 GLRX2Q9NS18 164 aa12.53□□□□□ -0.4
SNX20-202ENST00000330943 ETV2O00321 342 aaPredicted RBP12.52□□□□□ -0.4
SNX20-202ENST00000330943 NXPH3O95157 252 aa12.52□□□□□ -0.4
SNX20-202ENST00000330943 PTBP3O95758 552 aaKnown RBP12.52□□□□□ -0.4
SNX20-202ENST00000330943 CD63P08962 238 aa12.52□□□□□ -0.4
SNX20-202ENST00000330943 SELLP14151 372 aa12.52□□□□□ -0.4
SNX20-202ENST00000330943 DYNLT3P51808 116 aa12.52□□□□□ -0.4
SNX20-202ENST00000330943 LSM6P62312 80 aaKnown RBP12.52□□□□□ -0.4
SNX20-202ENST00000330943 VAMP2P63027 116 aa12.52□□□□□ -0.4
SNX20-202ENST00000330943 ENDOGQ14249 297 aaKnown RBP12.52□□□□□ -0.4
SNX20-202ENST00000330943 ZNF506Q5JVG8 444 aa12.52□□□□□ -0.4
SNX20-202ENST00000330943 REC114Q7Z4M0 266 aa12.52□□□□□ -0.4
SNX20-202ENST00000330943 TMEM252Q8N6L7 170 aa12.52□□□□□ -0.4
SNX20-202ENST00000330943 PLPP5Q8NEB5 264 aa12.52□□□□□ -0.4
SNX20-202ENST00000330943 OR10G3Q8NGC4 313 aa12.52□□□□□ -0.4
SNX20-202ENST00000330943 OR10AD1Q8NGE0 317 aa12.52□□□□□ -0.4
SNX20-202ENST00000330943 C11orf1Q9H5F2 150 aa12.52□□□□□ -0.4
SNX20-202ENST00000330943 PLEKHF2Q9H8W4 249 aa12.52□□□□□ -0.4
SNX20-202ENST00000330943 ZNF286AQ9HBT8 521 aa12.52□□□□□ -0.4
SNX20-202ENST00000330943 PLEK2Q9NYT0 353 aa12.52□□□□□ -0.4
SNX20-202ENST00000330943 LOC400499M0QZD8 3231 aa12.52□□□□□ -0.41
SNX20-202ENST00000330943 IGKV1-27A0A075B6S5 117 aa12.52□□□□□ -0.41
SNX20-202ENST00000330943 A0A087X0M5 115 aa12.52□□□□□ -0.41
SNX20-202ENST00000330943 C3orf85A0A1B0GTC6 90 aa12.52□□□□□ -0.41
SNX20-202ENST00000330943 A0A1B0GX30 115 aa12.52□□□□□ -0.41
SNX20-202ENST00000330943 TSTD3H0UI37 97 aa12.52□□□□□ -0.41
SNX20-202ENST00000330943 EPHA1P21709 976 aa12.52□□□□□ -0.41
SNX20-202ENST00000330943 Q3ZCU0 254 aa12.52□□□□□ -0.41
SNX20-202ENST00000330943 SLC25A53Q5H9E4 307 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms