RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 FBP1P09467 338 aa12.37□□□□□ -0.43
EPHB3-201ENST00000330394 PPP1CBP62140 327 aa12.37□□□□□ -0.43
EPHB3-201ENST00000330394 OR10A7Q8NGE5 316 aa12.37□□□□□ -0.43
EPHB3-201ENST00000330394 CTDSP1Q9GZU7 261 aa12.37□□□□□ -0.43
EPHB3-201ENST00000330394 SH3BGRL3Q9H299 93 aa12.37□□□□□ -0.43
EPHB3-201ENST00000330394 PISDQ9UG56 409 aa12.37□□□□□ -0.43
EPHB3-201ENST00000330394 PGA3P0DJD8 388 aa12.37□□□□□ -0.43
EPHB3-201ENST00000330394 GABRG2P18507 467 aa12.37□□□□□ -0.43
EPHB3-201ENST00000330394 P2RY1P47900 373 aa12.37□□□□□ -0.43
EPHB3-201ENST00000330394 FUT7Q11130 342 aa12.37□□□□□ -0.43
EPHB3-201ENST00000330394 LINC00696Q6ZRV3 163 aa12.37□□□□□ -0.43
EPHB3-201ENST00000330394 ASB10Q8WXI3 467 aa12.37□□□□□ -0.43
EPHB3-201ENST00000330394 SPSB1Q96BD6 273 aa12.37□□□□□ -0.43
EPHB3-201ENST00000330394 HIPK2Q9H2X6 1198 aa12.37□□□□□ -0.43
EPHB3-201ENST00000330394 TRAV39A0A0B4J263 110 aa12.37□□□□□ -0.43
EPHB3-201ENST00000330394 PTBP3O95758 552 aaKnown RBP12.37□□□□□ -0.43
EPHB3-201ENST00000330394 CD74P04233 296 aa12.37□□□□□ -0.43
EPHB3-201ENST00000330394 RNF224P0DH78 156 aa12.37□□□□□ -0.43
EPHB3-201ENST00000330394 GCH1P30793 250 aa12.37□□□□□ -0.43
EPHB3-201ENST00000330394 ARL3P36405 182 aa12.37□□□□□ -0.43
EPHB3-201ENST00000330394 VHLLQ6RSH7 139 aa12.37□□□□□ -0.43
EPHB3-201ENST00000330394 PHOSPHO2Q8TCD6 241 aa12.37□□□□□ -0.43
EPHB3-201ENST00000330394 MVB12AQ96EY5 273 aa12.37□□□□□ -0.43
EPHB3-201ENST00000330394 MMP17Q9ULZ9 603 aa12.37□□□□□ -0.43
EPHB3-201ENST00000330394 PDCD11Q14690 1871 aaKnown RBP12.37□□□□□ -0.43
EPHB3-201ENST00000330394 PQLC2LA1A4F0 135 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 M0R143 59 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 LINC01565O15544 149 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 PDCD6O75340 191 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 CD8AP01732 235 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 OR8U8P0C7N1 319 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 CCL2P13500 99 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 PKIAP61925 76 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 SUMO1P63165 101 aaKnown RBP12.36□□□□□ -0.43
EPHB3-201ENST00000330394 PIGYQ3MUY2 71 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 TBC1D26Q86UD7 250 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 PPP1R35Q8TAP8 253 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 NCOR1O75376 2440 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 TRIOBPQ9H2D6 2365 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 DIDO1Q9BTC0 2240 aaKnown RBP12.36□□□□□ -0.43
EPHB3-201ENST00000330394 A0A1W2PPC4 97 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 TERTO14746 1132 aaKnown RBP12.36□□□□□ -0.43
EPHB3-201ENST00000330394 FOXS1O43638 330 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 OPN1MWP04001 364 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 OPN1MW2P0DN77 364 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 OPN1MW3P0DN78 364 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 HKR1P10072 659 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 SSX7Q7RTT5 188 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 ADAMTS17Q8TE56 1095 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 BSCL2Q96G97 398 aaPredicted RBP12.36□□□□□ -0.43
EPHB3-201ENST00000330394 P4HTMQ9NXG6 502 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 CLCF1Q9UBD9 225 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 DUSP13Q9UII6 198 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 TGIF2-C20orf24A0A0A6YYL0 155 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 FAM166BA8MTA8 275 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 PRR32B1ATL7 298 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 CLN5O75503 358 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 PGA4P0DJD7 388 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 PGA5P0DJD9 388 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 ZNF32P17041 273 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 EFNB1P98172 346 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 LY6G6FQ5SQ64 297 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 OR1L3Q8NH93 324 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 PTPMT1Q8WUK0 201 aaPredicted RBP12.36□□□□□ -0.43
EPHB3-201ENST00000330394 DAZAP1Q96EP5 407 aaKnown RBP12.36□□□□□ -0.43
EPHB3-201ENST00000330394 CDCA3Q99618 268 aaPredicted RBP12.36□□□□□ -0.43
EPHB3-201ENST00000330394 REG4Q9BYZ8 158 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 ZNF331Q9NQX6 463 aaPredicted RBP12.36□□□□□ -0.43
EPHB3-201ENST00000330394 PLXNB2O15031 1838 aa12.36□□□□□ -0.43
EPHB3-201ENST00000330394 IGKV1D-42A0A075B6H8 117 aa12.35□□□□□ -0.43
EPHB3-201ENST00000330394 CD27P26842 260 aa12.35□□□□□ -0.43
EPHB3-201ENST00000330394 FUT6P51993 359 aa12.35□□□□□ -0.43
EPHB3-201ENST00000330394 WDR25Q64LD2 544 aaPredicted RBP12.35□□□□□ -0.43
EPHB3-201ENST00000330394 ETFRF1Q6IPR1 90 aa12.35□□□□□ -0.43
EPHB3-201ENST00000330394 GCNT2Q8N0V5 402 aa12.35□□□□□ -0.43
EPHB3-201ENST00000330394 ELSPBP1Q96BH3 223 aa12.35□□□□□ -0.43
EPHB3-201ENST00000330394 WFIKKN1Q96NZ8 548 aa12.35□□□□□ -0.43
EPHB3-201ENST00000330394 PRSS50Q9UI38 385 aa12.35□□□□□ -0.43
EPHB3-201ENST00000330394 SHANK1Q9Y566 2161 aa12.35□□□□□ -0.43
EPHB3-201ENST00000330394 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.35□□□□□ -0.43
EPHB3-201ENST00000330394 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.35□□□□□ -0.43
EPHB3-201ENST00000330394 MPPED1O15442 326 aa12.35□□□□□ -0.43
EPHB3-201ENST00000330394 MBPP02686 304 aaPredicted RBP12.35□□□□□ -0.43
EPHB3-201ENST00000330394 FAM3AP98173 230 aa12.35□□□□□ -0.43
EPHB3-201ENST00000330394 FFAR4Q5NUL3 377 aa12.35□□□□□ -0.43
EPHB3-201ENST00000330394 OR2T10Q8NGZ9 312 aa12.35□□□□□ -0.43
EPHB3-201ENST00000330394 OR1F12Q8NHA8 337 aa12.35□□□□□ -0.43
EPHB3-201ENST00000330394 TPPP3Q9BW30 176 aa12.35□□□□□ -0.43
EPHB3-201ENST00000330394 HDGFL3Q9Y3E1 203 aa12.35□□□□□ -0.43
EPHB3-201ENST00000330394 ELOA3CA0A087WX78 387 aaPredicted RBP12.35□□□□□ -0.43
EPHB3-201ENST00000330394 PPYP01298 95 aa12.35□□□□□ -0.43
EPHB3-201ENST00000330394 ZNF17P17021 662 aa12.35□□□□□ -0.43
EPHB3-201ENST00000330394 DDTP30046 118 aa12.35□□□□□ -0.43
EPHB3-201ENST00000330394 GAMTQ14353 236 aa12.35□□□□□ -0.43
EPHB3-201ENST00000330394 ZNF600Q6ZNG1 722 aa12.35□□□□□ -0.43
EPHB3-201ENST00000330394 KIAA1324LA8MWY0 1029 aaPredicted RBP12.35□□□□□ -0.43
EPHB3-201ENST00000330394 ZNHIT1O43257 154 aa12.35□□□□□ -0.43
EPHB3-201ENST00000330394 OR7C2O60412 319 aa12.35□□□□□ -0.43
EPHB3-201ENST00000330394 SLC38A11Q08AI6 406 aa12.35□□□□□ -0.43
EPHB3-201ENST00000330394 TMEM92Q6UXU6 159 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms