RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 WDR13Q9H1Z4 485 aa13.53□□□□□ -0.24
PGBD2-201ENST00000329291 C12orf4Q9NQ89 552 aa13.53□□□□□ -0.24
PGBD2-201ENST00000329291 DECR2Q9NUI1 292 aa13.53□□□□□ -0.24
PGBD2-201ENST00000329291 NECAP2Q9NVZ3 263 aa13.53□□□□□ -0.24
PGBD2-201ENST00000329291 H0YL77 283 aa13.52□□□□□ -0.24
PGBD2-201ENST00000329291 PRKACAP17612 351 aa13.52□□□□□ -0.24
PGBD2-201ENST00000329291 S100A11P31949 105 aa13.52□□□□□ -0.24
PGBD2-201ENST00000329291 AP2S1P53680 142 aaPredicted RBP13.52□□□□□ -0.24
PGBD2-201ENST00000329291 TMEM211Q6ICI0 200 aa13.52□□□□□ -0.24
PGBD2-201ENST00000329291 ZNF573Q86YE8 665 aa13.52□□□□□ -0.24
PGBD2-201ENST00000329291 CLEC4MQ9H2X3 399 aaPredicted RBP13.52□□□□□ -0.24
PGBD2-201ENST00000329291 RDH8Q9NYR8 311 aa13.52□□□□□ -0.24
PGBD2-201ENST00000329291 SHANK1Q9Y566 2161 aa13.52□□□□□ -0.25
PGBD2-201ENST00000329291 FAM90A10PA6NDY2 464 aa13.52□□□□□ -0.25
PGBD2-201ENST00000329291 FAM90A18PA6NE21 464 aa13.52□□□□□ -0.25
PGBD2-201ENST00000329291 FAM90A16PA6NEW6 464 aa13.52□□□□□ -0.25
PGBD2-201ENST00000329291 FAM90A20PA6NIJ5 464 aa13.52□□□□□ -0.25
PGBD2-201ENST00000329291 FAM90A8PA6NJQ4 464 aa13.52□□□□□ -0.25
PGBD2-201ENST00000329291 FAM90A7PA6NKC0 464 aa13.52□□□□□ -0.25
PGBD2-201ENST00000329291 OR5B21A6NL26 309 aa13.52□□□□□ -0.25
PGBD2-201ENST00000329291 FAM90A22PA8MWA6 464 aa13.52□□□□□ -0.25
PGBD2-201ENST00000329291 FAM90A12PA8MX19 464 aa13.52□□□□□ -0.25
PGBD2-201ENST00000329291 FAM90A5PA8MXJ8 464 aa13.52□□□□□ -0.25
PGBD2-201ENST00000329291 FAM90A23PA8MXZ1 464 aa13.52□□□□□ -0.25
PGBD2-201ENST00000329291 KCNAB3O43448 404 aa13.52□□□□□ -0.25
PGBD2-201ENST00000329291 CRHP06850 196 aa13.52□□□□□ -0.25
PGBD2-201ENST00000329291 FAM90A15PP0C7V4 464 aa13.52□□□□□ -0.25
PGBD2-201ENST00000329291 FAM90A13PP0C7W8 464 aa13.52□□□□□ -0.25
PGBD2-201ENST00000329291 FAM90A14PP0C7W9 464 aa13.52□□□□□ -0.25
PGBD2-201ENST00000329291 FAM90A24PP0C7X0 464 aa13.52□□□□□ -0.25
PGBD2-201ENST00000329291 S100A1P23297 94 aa13.52□□□□□ -0.25
PGBD2-201ENST00000329291 SURF2Q15527 256 aaPredicted RBP13.52□□□□□ -0.25
PGBD2-201ENST00000329291 EIF2S3LQ2VIR3 472 aaKnown RBP13.52□□□□□ -0.25
PGBD2-201ENST00000329291 IGSF11Q5DX21 431 aa13.52□□□□□ -0.25
PGBD2-201ENST00000329291 C1orf185Q5T7R7 199 aa13.52□□□□□ -0.25
PGBD2-201ENST00000329291 ZNF546Q86UE3 836 aa13.52□□□□□ -0.25
PGBD2-201ENST00000329291 ARL6Q9H0F7 186 aa13.52□□□□□ -0.25
PGBD2-201ENST00000329291 RCC2Q9P258 522 aaKnown RBP13.52□□□□□ -0.25
PGBD2-201ENST00000329291 ESPL1Q14674 2120 aa13.51□□□□□ -0.25
PGBD2-201ENST00000329291 C5orf51A6NDU8 294 aa13.51□□□□□ -0.25
PGBD2-201ENST00000329291 J3QW42 95 aa13.51□□□□□ -0.25
PGBD2-201ENST00000329291 SELEP16581 610 aa13.51□□□□□ -0.25
PGBD2-201ENST00000329291 FCGR2CP31995 323 aa13.51□□□□□ -0.25
PGBD2-201ENST00000329291 PMELP40967 661 aa13.51□□□□□ -0.25
PGBD2-201ENST00000329291 GMFBP60983 142 aa13.51□□□□□ -0.25
PGBD2-201ENST00000329291 IKZF1Q13422 519 aa13.51□□□□□ -0.25
PGBD2-201ENST00000329291 KLF14Q8TD94 323 aaPredicted RBP13.51□□□□□ -0.25
PGBD2-201ENST00000329291 POM121Q96HA1 1249 aa13.51□□□□□ -0.25
PGBD2-201ENST00000329291 MFFQ9GZY8 342 aa13.51□□□□□ -0.25
PGBD2-201ENST00000329291 RP1L1Q8IWN7 2480 aaPredicted RBP13.51□□□□□ -0.25
PGBD2-201ENST00000329291 ANKRD34BA5PLL1 514 aa13.51□□□□□ -0.25
PGBD2-201ENST00000329291 CECR9P0C854 216 aa13.51□□□□□ -0.25
PGBD2-201ENST00000329291 RAC2P15153 192 aa13.51□□□□□ -0.25
PGBD2-201ENST00000329291 TMPRSS3P57727 454 aa13.51□□□□□ -0.25
PGBD2-201ENST00000329291 IL24Q13007 206 aa13.51□□□□□ -0.25
PGBD2-201ENST00000329291 ATXN7L3Q14CW9 347 aaPredicted RBP13.51□□□□□ -0.25
PGBD2-201ENST00000329291 FAM76BQ5HYJ3 339 aa13.51□□□□□ -0.25
PGBD2-201ENST00000329291 C11orf87Q6NUJ2 197 aa13.51□□□□□ -0.25
PGBD2-201ENST00000329291 FAM219AQ8IW50 185 aa13.51□□□□□ -0.25
PGBD2-201ENST00000329291 TOMM40LQ969M1 308 aa13.51□□□□□ -0.25
PGBD2-201ENST00000329291 ZNF286AQ9HBT8 521 aa13.51□□□□□ -0.25
PGBD2-201ENST00000329291 FZR1Q9UM11 496 aa13.51□□□□□ -0.25
PGBD2-201ENST00000329291 HS3ST1O14792 307 aa13.5□□□□□ -0.25
PGBD2-201ENST00000329291 NAPSAO96009 420 aa13.5□□□□□ -0.25
PGBD2-201ENST00000329291 RPA2P15927 270 aa13.5□□□□□ -0.25
PGBD2-201ENST00000329291 FXYD4P59646 89 aa13.5□□□□□ -0.25
PGBD2-201ENST00000329291 C20orf204Q6ZNR8 217 aa13.5□□□□□ -0.25
PGBD2-201ENST00000329291 FAM58AQ8N1B3 248 aa13.5□□□□□ -0.25
PGBD2-201ENST00000329291 SCCPDHQ8NBX0 429 aa13.5□□□□□ -0.25
PGBD2-201ENST00000329291 OR10C1Q96KK4 312 aa13.5□□□□□ -0.25
PGBD2-201ENST00000329291 CHMP1AQ9HD42 196 aaPredicted RBP13.5□□□□□ -0.25
PGBD2-201ENST00000329291 C14orf166Q9Y224 244 aaKnown RBP13.5□□□□□ -0.25
PGBD2-201ENST00000329291 TRAV24A0A0B4J272 114 aa13.49□□□□□ -0.25
PGBD2-201ENST00000329291 RPS10-NUDT3A0A1W2PQS6 291 aa13.49□□□□□ -0.25
PGBD2-201ENST00000329291 CTSDP07339 412 aaPredicted RBP13.49□□□□□ -0.25
PGBD2-201ENST00000329291 RBMXP38159 391 aaKnown RBP13.49□□□□□ -0.25
PGBD2-201ENST00000329291 UCNP55089 124 aa13.49□□□□□ -0.25
PGBD2-201ENST00000329291 P2RY6Q15077 328 aa13.49□□□□□ -0.25
PGBD2-201ENST00000329291 TMEM65Q6PI78 240 aa13.49□□□□□ -0.25
PGBD2-201ENST00000329291 ZNF474Q6S9Z5 364 aaPredicted RBP13.49□□□□□ -0.25
PGBD2-201ENST00000329291 BEND4Q6ZU67 534 aa13.49□□□□□ -0.25
PGBD2-201ENST00000329291 SUMF2Q8NBJ7 301 aa13.49□□□□□ -0.25
PGBD2-201ENST00000329291 FAM57AQ8TBR7 257 aa13.49□□□□□ -0.25
PGBD2-201ENST00000329291 PKIBQ9C010 78 aa13.49□□□□□ -0.25
PGBD2-201ENST00000329291 A0A0B4J2A0 478 aa13.49□□□□□ -0.25
PGBD2-201ENST00000329291 IGHV1-18A0A0C4DH31 117 aa13.49□□□□□ -0.25
PGBD2-201ENST00000329291 IQCF6A8MYZ5 107 aa13.49□□□□□ -0.25
PGBD2-201ENST00000329291 J3QT63 122 aa13.49□□□□□ -0.25
PGBD2-201ENST00000329291 IFNA7P01567 189 aa13.49□□□□□ -0.25
PGBD2-201ENST00000329291 IGLV1-44P01699 117 aa13.49□□□□□ -0.25
PGBD2-201ENST00000329291 HOXD4P09016 255 aaPredicted RBP13.49□□□□□ -0.25
PGBD2-201ENST00000329291 SCTP09683 121 aa13.49□□□□□ -0.25
PGBD2-201ENST00000329291 SLC25A4P12235 298 aa13.49□□□□□ -0.25
PGBD2-201ENST00000329291 HOXA4Q00056 320 aaPredicted RBP13.49□□□□□ -0.25
PGBD2-201ENST00000329291 MPV17LQ2QL34 196 aa13.49□□□□□ -0.25
PGBD2-201ENST00000329291 ZNF324BQ6AW86 544 aaPredicted RBP13.49□□□□□ -0.25
PGBD2-201ENST00000329291 GSG1LQ6UXU4 331 aa13.49□□□□□ -0.25
PGBD2-201ENST00000329291 BHLHA15Q7RTS1 189 aaPredicted RBP13.49□□□□□ -0.25
PGBD2-201ENST00000329291 RDH5Q92781 318 aa13.49□□□□□ -0.25
PGBD2-201ENST00000329291 RTL8AQ9BWD3 113 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms