RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 COQ2Q96H96 371 aa9.91□□□□□ -0.82
TPM3-204ENST00000323144 C4orf36Q96KX1 117 aa9.91□□□□□ -0.82
TPM3-204ENST00000323144 WNT10AQ9GZT5 417 aa9.91□□□□□ -0.82
TPM3-204ENST00000323144 PPIL3Q9H2H8 161 aaKnown RBP9.91□□□□□ -0.82
TPM3-204ENST00000323144 ZNF286AQ9HBT8 521 aa9.91□□□□□ -0.82
TPM3-204ENST00000323144 HMG20AQ9NP66 347 aa9.91□□□□□ -0.82
TPM3-204ENST00000323144 EXOSC4Q9NPD3 245 aaKnown RBP9.91□□□□□ -0.82
TPM3-204ENST00000323144 GSTK1Q9Y2Q3 226 aa9.91□□□□□ -0.82
TPM3-204ENST00000323144 A0A1W2PRX2 142 aa9.9□□□□□ -0.82
TPM3-204ENST00000323144 DAPL1A0PJW8 107 aa9.9□□□□□ -0.82
TPM3-204ENST00000323144 SH2D7A6NKC9 451 aaPredicted RBP9.9□□□□□ -0.82
TPM3-204ENST00000323144 OR4C45A6NMZ5 311 aa9.9□□□□□ -0.82
TPM3-204ENST00000323144 MGST3O14880 152 aa9.9□□□□□ -0.82
TPM3-204ENST00000323144 CIB2O75838 187 aa9.9□□□□□ -0.82
TPM3-204ENST00000323144 HTR1AP08908 422 aa9.9□□□□□ -0.82
TPM3-204ENST00000323144 VDAC2P45880 294 aaPredicted RBP9.9□□□□□ -0.82
TPM3-204ENST00000323144 GLIPR1P48060 266 aa9.9□□□□□ -0.82
TPM3-204ENST00000323144 DYNLT3P51808 116 aa9.9□□□□□ -0.82
TPM3-204ENST00000323144 MTCP1P56278 107 aa9.9□□□□□ -0.82
TPM3-204ENST00000323144 PDZK1IP1Q13113 114 aa9.9□□□□□ -0.82
TPM3-204ENST00000323144 OXLD1Q5BKU9 147 aa9.9□□□□□ -0.82
TPM3-204ENST00000323144 ARSJQ5FYB0 599 aaPredicted RBP9.9□□□□□ -0.82
TPM3-204ENST00000323144 MINOS1Q5TGZ0 78 aa9.9□□□□□ -0.82
TPM3-204ENST00000323144 TMEM244Q5VVB8 128 aa9.9□□□□□ -0.82
TPM3-204ENST00000323144 FDX2Q6P4F2 183 aa9.9□□□□□ -0.82
TPM3-204ENST00000323144 Q6ZPA2 131 aa9.9□□□□□ -0.82
TPM3-204ENST00000323144 SPSB1Q96BD6 273 aa9.9□□□□□ -0.82
TPM3-204ENST00000323144 HRASLS5Q96KN8 279 aa9.9□□□□□ -0.82
TPM3-204ENST00000323144 NEK6Q9HC98 313 aa9.9□□□□□ -0.82
TPM3-204ENST00000323144 ING3Q9NXR8 418 aa9.9□□□□□ -0.82
TPM3-204ENST00000323144 MINOS1-NBL1R4GNA1 71 aa9.9□□□□□ -0.82
TPM3-204ENST00000323144 J3QLW9 94 aa9.89□□□□□ -0.83
TPM3-204ENST00000323144 HSPB6O14558 160 aa9.89□□□□□ -0.83
TPM3-204ENST00000323144 KDM4BO94953 1096 aa9.89□□□□□ -0.83
TPM3-204ENST00000323144 CYB5AP00167 134 aa9.89□□□□□ -0.83
TPM3-204ENST00000323144 SERPINA3P01011 423 aa9.89□□□□□ -0.83
TPM3-204ENST00000323144 ISG15P05161 165 aa9.89□□□□□ -0.83
TPM3-204ENST00000323144 DBTP11182 482 aaKnown RBP9.89□□□□□ -0.83
TPM3-204ENST00000323144 ZNF19P17023 458 aa9.89□□□□□ -0.83
TPM3-204ENST00000323144 PRKACBP22694 351 aa9.89□□□□□ -0.83
TPM3-204ENST00000323144 CDK2P24941 298 aa9.89□□□□□ -0.83
TPM3-204ENST00000323144 ZP1P60852 638 aa9.89□□□□□ -0.83
TPM3-204ENST00000323144 AESQ08117 197 aa9.89□□□□□ -0.83
TPM3-204ENST00000323144 IL18R1Q13478 541 aa9.89□□□□□ -0.83
TPM3-204ENST00000323144 KPNB1Q14974 876 aaKnown RBP9.89□□□□□ -0.83
TPM3-204ENST00000323144 NDUFA11Q86Y39 141 aa9.89□□□□□ -0.83
TPM3-204ENST00000323144 ENTHD1Q8IYW4 607 aa9.89□□□□□ -0.83
TPM3-204ENST00000323144 R3HDM4Q96D70 268 aa9.89□□□□□ -0.83
TPM3-204ENST00000323144 LGALS12Q96DT0 336 aa9.89□□□□□ -0.83
TPM3-204ENST00000323144 ALG8Q9BVK2 526 aa9.89□□□□□ -0.83
TPM3-204ENST00000323144 PRSS22Q9GZN4 317 aa9.89□□□□□ -0.83
TPM3-204ENST00000323144 COMMD4Q9H0A8 199 aa9.89□□□□□ -0.83
TPM3-204ENST00000323144 ISG20L2Q9H9L3 353 aaKnown RBP9.89□□□□□ -0.83
TPM3-204ENST00000323144 PITPNC1Q9UKF7 332 aa9.89□□□□□ -0.83
TPM3-204ENST00000323144 HHLA2Q9UM44 414 aa9.89□□□□□ -0.83
TPM3-204ENST00000323144 KIAA2026Q5HYC2 2103 aa9.89□□□□□ -0.83
TPM3-204ENST00000323144 FAM90A22PA8MWA6 464 aa9.88□□□□□ -0.83
TPM3-204ENST00000323144 E9PI62 339 aa9.88□□□□□ -0.83
TPM3-204ENST00000323144 SLC33A1O00400 549 aaPredicted RBP9.88□□□□□ -0.83
TPM3-204ENST00000323144 ZNF44P15621 663 aa9.88□□□□□ -0.83
TPM3-204ENST00000323144 GABRB1P18505 474 aa9.88□□□□□ -0.83
TPM3-204ENST00000323144 ERP29P30040 261 aaKnown RBP9.88□□□□□ -0.83
TPM3-204ENST00000323144 PTGFRP43088 359 aa9.88□□□□□ -0.83
TPM3-204ENST00000323144 RASSF2P50749 326 aa9.88□□□□□ -0.83
TPM3-204ENST00000323144 SNRPGP62308 76 aaKnown RBP9.88□□□□□ -0.83
TPM3-204ENST00000323144 ZSCAN26Q16670 478 aa9.88□□□□□ -0.83
TPM3-204ENST00000323144 Q6P435 159 aa9.88□□□□□ -0.83
TPM3-204ENST00000323144 C10orf99Q6UWK7 81 aa9.88□□□□□ -0.83
TPM3-204ENST00000323144 CBR4Q8N4T8 237 aa9.88□□□□□ -0.83
TPM3-204ENST00000323144 RGP1Q92546 391 aaPredicted RBP9.88□□□□□ -0.83
TPM3-204ENST00000323144 PHF21AQ96BD5 680 aa9.88□□□□□ -0.83
TPM3-204ENST00000323144 GAL3ST2Q9H3Q3 398 aa9.88□□□□□ -0.83
TPM3-204ENST00000323144 SEBOXQ9HB31 216 aaPredicted RBP9.88□□□□□ -0.83
TPM3-204ENST00000323144 ZNF581Q9P0T4 197 aa9.88□□□□□ -0.83
TPM3-204ENST00000323144 MYRFQ9Y2G1 1151 aa9.88□□□□□ -0.83
TPM3-204ENST00000323144 UBE2J1Q9Y385 318 aaPredicted RBP9.88□□□□□ -0.83
TPM3-204ENST00000323144 TRGV10A0A0A0MS01 117 aa9.87□□□□□ -0.83
TPM3-204ENST00000323144 ODAMA1E959 279 aa9.87□□□□□ -0.83
TPM3-204ENST00000323144 PIN1P1O15428 100 aa9.87□□□□□ -0.83
TPM3-204ENST00000323144 IGLV1-47P01700 117 aa9.87□□□□□ -0.83
TPM3-204ENST00000323144 HCKP08631 526 aa9.87□□□□□ -0.83
TPM3-204ENST00000323144 OCM2P0CE71 109 aa9.87□□□□□ -0.83
TPM3-204ENST00000323144 OCMP0CE72 109 aaPredicted RBP9.87□□□□□ -0.83
TPM3-204ENST00000323144 HTR1DP28221 377 aa9.87□□□□□ -0.83
TPM3-204ENST00000323144 GLP1RP43220 463 aa9.87□□□□□ -0.83
TPM3-204ENST00000323144 ALDH3A2P51648 485 aa9.87□□□□□ -0.83
TPM3-204ENST00000323144 CCR9P51686 369 aa9.87□□□□□ -0.83
TPM3-204ENST00000323144 SCN1BQ07699 218 aa9.87□□□□□ -0.83
TPM3-204ENST00000323144 ALKBH1Q13686 389 aaKnown RBP9.87□□□□□ -0.83
TPM3-204ENST00000323144 CDK5R1Q15078 307 aa9.87□□□□□ -0.83
TPM3-204ENST00000323144 TCTEX1D4Q5JR98 221 aa9.87□□□□□ -0.83
TPM3-204ENST00000323144 LHFPL3Q86UP9 236 aa9.87□□□□□ -0.83
TPM3-204ENST00000323144 ABHD12Q8N2K0 398 aa9.87□□□□□ -0.83
TPM3-204ENST00000323144 ACBD7Q8N6N7 88 aa9.87□□□□□ -0.83
TPM3-204ENST00000323144 OR51A2Q8NGJ7 313 aa9.87□□□□□ -0.83
TPM3-204ENST00000323144 PDCD1LG2Q9BQ51 273 aa9.87□□□□□ -0.83
TPM3-204ENST00000323144 OCSTAMPQ9BR26 566 aa9.87□□□□□ -0.83
TPM3-204ENST00000323144 ZNF649Q9BS31 505 aa9.87□□□□□ -0.83
TPM3-204ENST00000323144 SLC25A33Q9BSK2 321 aa9.87□□□□□ -0.83
TPM3-204ENST00000323144 AURKAIP1Q9NWT8 199 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms