RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 TMEM144Q7Z5S9 345 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 SLC25A45Q8N413 288 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 LYPD6BQ8NI32 183 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 ZPLD1Q8TCW7 415 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 TMEM18Q96B42 140 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 GPR146Q96CH1 333 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 CCDC3Q9BQI4 270 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 CABLES2Q9BTV7 478 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 HIF3AQ9Y2N7 669 aa9.04□□□□□ -0.96
SF3B2-201ENST00000322535 CNOT1A5YKK6 2376 aaKnown RBP9.04□□□□□ -0.96
SF3B2-201ENST00000322535 LRP4O75096 1905 aa9.03□□□□□ -0.96
SF3B2-201ENST00000322535 C19orf67A6NJJ6 358 aa9.03□□□□□ -0.96
SF3B2-201ENST00000322535 H0YGG7 62 aa9.03□□□□□ -0.96
SF3B2-201ENST00000322535 IL2RAP01589 272 aa9.03□□□□□ -0.96
SF3B2-201ENST00000322535 RAB38P57729 211 aa9.03□□□□□ -0.96
SF3B2-201ENST00000322535 ARF3P61204 181 aaPredicted RBP9.03□□□□□ -0.96
SF3B2-201ENST00000322535 GLYATL3Q5SZD4 288 aa9.03□□□□□ -0.96
SF3B2-201ENST00000322535 FAM174AQ8TBP5 190 aa9.03□□□□□ -0.96
SF3B2-201ENST00000322535 UBE2E3Q969T4 207 aa9.03□□□□□ -0.96
SF3B2-201ENST00000322535 SLC41A2Q96JW4 573 aa9.03□□□□□ -0.96
SF3B2-201ENST00000322535 OR7D2Q96RA2 312 aa9.03□□□□□ -0.96
SF3B2-201ENST00000322535 ARHGDIGQ99819 225 aa9.03□□□□□ -0.96
SF3B2-201ENST00000322535 C12orf49Q9H741 205 aa9.03□□□□□ -0.96
SF3B2-201ENST00000322535 ZNF703Q9H7S9 590 aaPredicted RBP9.03□□□□□ -0.96
SF3B2-201ENST00000322535 PELI2Q9HAT8 420 aa9.03□□□□□ -0.96
SF3B2-201ENST00000322535 SIGLEC7Q9Y286 467 aa9.03□□□□□ -0.96
SF3B2-201ENST00000322535 TMEM131Q92545 1883 aa9.03□□□□□ -0.96
SF3B2-201ENST00000322535 CNTRLQ7Z7A1 2325 aa9.03□□□□□ -0.96
SF3B2-201ENST00000322535 PRRC2CQ9Y520 2896 aaKnown RBP9.03□□□□□ -0.96
SF3B2-201ENST00000322535 ZFHX4Q86UP3 3567 aa9.03□□□□□ -0.96
SF3B2-201ENST00000322535 TRAV30A0A087WSZ9 112 aa9.03□□□□□ -0.96
SF3B2-201ENST00000322535 ZNF891A8MT65 544 aaPredicted RBP9.03□□□□□ -0.96
SF3B2-201ENST00000322535 CORTO00230 105 aa9.03□□□□□ -0.96
SF3B2-201ENST00000322535 LDB3O75112 727 aa9.03□□□□□ -0.96
SF3B2-201ENST00000322535 LIPFP07098 398 aa9.03□□□□□ -0.96
SF3B2-201ENST00000322535 FRKP42685 505 aaPredicted RBP9.03□□□□□ -0.96
SF3B2-201ENST00000322535 GLIPR1P48060 266 aa9.03□□□□□ -0.96
SF3B2-201ENST00000322535 BLKP51451 505 aa9.03□□□□□ -0.96
SF3B2-201ENST00000322535 SLC25A1P53007 311 aa9.03□□□□□ -0.96
SF3B2-201ENST00000322535 H3F3AP84243 136 aa9.03□□□□□ -0.96
SF3B2-201ENST00000322535 PMPCAQ10713 525 aa9.03□□□□□ -0.96
SF3B2-201ENST00000322535 VAMP3Q15836 100 aa9.03□□□□□ -0.96
SF3B2-201ENST00000322535 SNAI3Q3KNW1 292 aa9.03□□□□□ -0.96
SF3B2-201ENST00000322535 TOMM20LQ6UXN7 152 aa9.03□□□□□ -0.96
SF3B2-201ENST00000322535 NOXO1Q8NFA2 376 aa9.03□□□□□ -0.96
SF3B2-201ENST00000322535 TVP23CQ96ET8 276 aa9.03□□□□□ -0.96
SF3B2-201ENST00000322535 DCHS1Q96JQ0 3298 aa9.03□□□□□ -0.96
SF3B2-201ENST00000322535 LAMTOR5O43504 91 aa9.02□□□□□ -0.96
SF3B2-201ENST00000322535 FAHP16930 419 aa9.02□□□□□ -0.96
SF3B2-201ENST00000322535 UCP1P25874 307 aa9.02□□□□□ -0.96
SF3B2-201ENST00000322535 RAB9AP51151 201 aa9.02□□□□□ -0.96
SF3B2-201ENST00000322535 CLDN6P56747 220 aa9.02□□□□□ -0.96
SF3B2-201ENST00000322535 NXPH1P58417 271 aa9.02□□□□□ -0.96
SF3B2-201ENST00000322535 ANKRD55Q3KP44 614 aa9.02□□□□□ -0.96
SF3B2-201ENST00000322535 CST9LP1Q5W188 147 aa9.02□□□□□ -0.96
SF3B2-201ENST00000322535 ABHD17CQ6PCB6 329 aa9.02□□□□□ -0.96
SF3B2-201ENST00000322535 CLEC18BQ6UXF7 455 aa9.02□□□□□ -0.96
SF3B2-201ENST00000322535 SLC25A26Q70HW3 274 aa9.02□□□□□ -0.96
SF3B2-201ENST00000322535 MDGA2Q7Z553 956 aa9.02□□□□□ -0.96
SF3B2-201ENST00000322535 UBALD2Q8IYN6 164 aa9.02□□□□□ -0.96
SF3B2-201ENST00000322535 ZCCHC14Q8WYQ9 949 aaKnown RBP9.02□□□□□ -0.96
SF3B2-201ENST00000322535 IL22RA2Q969J5 263 aa9.02□□□□□ -0.96
SF3B2-201ENST00000322535 PPP1R14AQ96A00 147 aa9.02□□□□□ -0.96
SF3B2-201ENST00000322535 OR2A5Q96R48 311 aa9.02□□□□□ -0.96
SF3B2-201ENST00000322535 RBKSQ9H477 322 aa9.02□□□□□ -0.96
SF3B2-201ENST00000322535 CDH20Q9HBT6 801 aa9.02□□□□□ -0.96
SF3B2-201ENST00000322535 G6PC2Q9NQR9 355 aa9.02□□□□□ -0.96
SF3B2-201ENST00000322535 CUTCQ9NTM9 273 aa9.02□□□□□ -0.96
SF3B2-201ENST00000322535 LRIT1Q9P2V4 623 aa9.02□□□□□ -0.96
SF3B2-201ENST00000322535 PTPRZ1P23471 2315 aaPredicted RBP9.02□□□□□ -0.97
SF3B2-201ENST00000322535 PPIAL4EA0A075B759 164 aa9.02□□□□□ -0.97
SF3B2-201ENST00000322535 PPIAL4CA0A0B4J2A2 164 aa9.02□□□□□ -0.97
SF3B2-201ENST00000322535 RBFOX3A6NFN3 312 aa9.02□□□□□ -0.97
SF3B2-201ENST00000322535 FTCDNL1E5RQL4 147 aa9.02□□□□□ -0.97
SF3B2-201ENST00000322535 PPIAL4DF5H284 164 aa9.02□□□□□ -0.97
SF3B2-201ENST00000322535 HSD17B6O14756 317 aa9.02□□□□□ -0.97
SF3B2-201ENST00000322535 TAAR5O14804 337 aa9.02□□□□□ -0.97
SF3B2-201ENST00000322535 FGF17O60258 216 aa9.02□□□□□ -0.97
SF3B2-201ENST00000322535 PRKNO60260 465 aaPredicted RBP9.02□□□□□ -0.97
SF3B2-201ENST00000322535 KNG1P01042 644 aa9.02□□□□□ -0.97
SF3B2-201ENST00000322535 PET100P0DJ07 73 aa9.02□□□□□ -0.97
SF3B2-201ENST00000322535 PPIAL4FP0DN26 164 aa9.02□□□□□ -0.97
SF3B2-201ENST00000322535 HIST1H1TP22492 207 aaPredicted RBP9.02□□□□□ -0.97
SF3B2-201ENST00000322535 CXCR1P25024 350 aa9.02□□□□□ -0.97
SF3B2-201ENST00000322535 ARRB1P49407 418 aaPredicted RBP9.02□□□□□ -0.97
SF3B2-201ENST00000322535 UCP2P55851 309 aa9.02□□□□□ -0.97
SF3B2-201ENST00000322535 RND3P61587 244 aa9.02□□□□□ -0.97
SF3B2-201ENST00000322535 PRSS8Q16651 343 aa9.02□□□□□ -0.97
SF3B2-201ENST00000322535 PLXDC2Q6UX71 529 aa9.02□□□□□ -0.97
SF3B2-201ENST00000322535 RTN4RL2Q86UN3 420 aa9.02□□□□□ -0.97
SF3B2-201ENST00000322535 TMEM105Q8N8V8 129 aa9.02□□□□□ -0.97
SF3B2-201ENST00000322535 ZFP62Q8NB50 900 aaPredicted RBP9.02□□□□□ -0.97
SF3B2-201ENST00000322535 RCBTB1Q8NDN9 531 aa9.02□□□□□ -0.97
SF3B2-201ENST00000322535 RAB11FIP5Q9BXF6 653 aa9.02□□□□□ -0.97
SF3B2-201ENST00000322535 BCL2L10Q9HD36 194 aa9.02□□□□□ -0.97
SF3B2-201ENST00000322535 TBL2Q9Y4P3 447 aaKnown RBP9.02□□□□□ -0.97
SF3B2-201ENST00000322535 IGHV5-51A0A0C4DH38 117 aa9.01□□□□□ -0.97
SF3B2-201ENST00000322535 C10orf142B7Z368 130 aa9.01□□□□□ -0.97
SF3B2-201ENST00000322535 ZNF814B7Z6K7 855 aa9.01□□□□□ -0.97
SF3B2-201ENST00000322535 PROB1E7EW31 1015 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms